RNA–Protein interactions for RNA: ENST00000466763.5

UBA3-209, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-209ENST00000466763 DNPH1O43598 174 aa12.39□□□□□ -0.43
UBA3-209ENST00000466763 EIF1BO60739 113 aaKnown RBP12.39□□□□□ -0.43
UBA3-209ENST00000466763 CYTIPO60759 359 aa12.39□□□□□ -0.43
UBA3-209ENST00000466763 TNFSF13O75888 250 aa12.39□□□□□ -0.43
UBA3-209ENST00000466763 ATP5HO75947 161 aa12.39□□□□□ -0.43
UBA3-209ENST00000466763 OR5F1O95221 314 aa12.39□□□□□ -0.43
UBA3-209ENST00000466763 THY1P04216 161 aa12.39□□□□□ -0.43
UBA3-209ENST00000466763 COL8A1P27658 744 aa12.39□□□□□ -0.43
UBA3-209ENST00000466763 GRNP28799 593 aaKnown RBP12.39□□□□□ -0.43
UBA3-209ENST00000466763 UQCRC1P31930 480 aa12.39□□□□□ -0.43
UBA3-209ENST00000466763 KIR2DL2P43627 348 aaPredicted RBP12.39□□□□□ -0.43
UBA3-209ENST00000466763 RASSF2P50749 326 aa12.39□□□□□ -0.43
UBA3-209ENST00000466763 IL1RL1Q01638 556 aa12.39□□□□□ -0.43
UBA3-209ENST00000466763 EGR4Q05215 589 aa12.39□□□□□ -0.43
UBA3-209ENST00000466763 OTUD3Q5T2D3 398 aaPredicted RBP12.39□□□□□ -0.43
UBA3-209ENST00000466763 TMEM225Q6GV28 225 aa12.39□□□□□ -0.43
UBA3-209ENST00000466763 C5orf46Q6UWT4 87 aa12.39□□□□□ -0.43
UBA3-209ENST00000466763 FAM214BQ7L5A3 538 aa12.39□□□□□ -0.43
UBA3-209ENST00000466763 BTLAQ7Z6A9 289 aa12.39□□□□□ -0.43
UBA3-209ENST00000466763 CYP4Z1Q86W10 505 aa12.39□□□□□ -0.43
UBA3-209ENST00000466763 DHFR2Q86XF0 187 aa12.39□□□□□ -0.43
UBA3-209ENST00000466763 TUSC5Q8IXB3 177 aa12.39□□□□□ -0.43
UBA3-209ENST00000466763 TMEM99Q8N816 258 aa12.39□□□□□ -0.43
UBA3-209ENST00000466763 PIGXQ8TBF5 258 aa12.39□□□□□ -0.43
UBA3-209ENST00000466763 TAAR8Q969N4 342 aa12.39□□□□□ -0.43
UBA3-209ENST00000466763 SLC7A6OSQ96CW6 309 aaPredicted RBP12.39□□□□□ -0.43
UBA3-209ENST00000466763 LRRC46Q96FV0 321 aa12.39□□□□□ -0.43
UBA3-209ENST00000466763 PYURFQ96I23 114 aa12.39□□□□□ -0.43
UBA3-209ENST00000466763 LRGUKQ96M69 825 aa12.39□□□□□ -0.43
UBA3-209ENST00000466763 FNDC11Q9BVV2 318 aa12.39□□□□□ -0.43
UBA3-209ENST00000466763 OPN3Q9H1Y3 402 aaPredicted RBP12.39□□□□□ -0.43
UBA3-209ENST00000466763 PIGMQ9H3S5 423 aa12.39□□□□□ -0.43
UBA3-209ENST00000466763 ACTR3BQ9P1U1 418 aa12.39□□□□□ -0.43
UBA3-209ENST00000466763 PROCRQ9UNN8 238 aa12.39□□□□□ -0.43
UBA3-209ENST00000466763 KLF2Q9Y5W3 355 aaPredicted RBP12.39□□□□□ -0.43
UBA3-209ENST00000466763 ZNF814B7Z6K7 855 aa12.38□□□□□ -0.43
UBA3-209ENST00000466763 hCG_2039718K7EN88 272 aa12.38□□□□□ -0.43
UBA3-209ENST00000466763 OR2T1O43869 369 aa12.38□□□□□ -0.43
UBA3-209ENST00000466763 SS18L1O75177 396 aaPredicted RBP12.38□□□□□ -0.43
UBA3-209ENST00000466763 NPIPB7O75200 414 aa12.38□□□□□ -0.43
UBA3-209ENST00000466763 DNAJC8O75937 253 aaPredicted RBP12.38□□□□□ -0.43
UBA3-209ENST00000466763 YES1P07947 543 aa12.38□□□□□ -0.43
UBA3-209ENST00000466763 ASCL1P50553 236 aa12.38□□□□□ -0.43
UBA3-209ENST00000466763 ST3GAL3Q11203 375 aa12.38□□□□□ -0.43
UBA3-209ENST00000466763 TRIM25Q14258 630 aaKnown RBP12.38□□□□□ -0.43
UBA3-209ENST00000466763 EXOC3L2Q2M3D2 409 aa12.38□□□□□ -0.43
UBA3-209ENST00000466763 FAM69AQ5T7M9 428 aa12.38□□□□□ -0.43
UBA3-209ENST00000466763 SP5Q6BEB4 398 aaPredicted RBP12.38□□□□□ -0.43
UBA3-209ENST00000466763 WDR88Q6ZMY6 472 aa12.38□□□□□ -0.43
UBA3-209ENST00000466763 NKAIN4Q8IVV8 208 aa12.38□□□□□ -0.43
UBA3-209ENST00000466763 FAM86B1Q8N7N1 296 aa12.38□□□□□ -0.43
UBA3-209ENST00000466763 MFSD8Q8NHS3 518 aa12.38□□□□□ -0.43
UBA3-209ENST00000466763 MCUR1Q96AQ8 359 aa12.38□□□□□ -0.43
UBA3-209ENST00000466763 STARD4Q96DR4 205 aa12.38□□□□□ -0.43
UBA3-209ENST00000466763 MPP4Q96JB8 637 aa12.38□□□□□ -0.43
UBA3-209ENST00000466763 PRRC1Q96M27 445 aa12.38□□□□□ -0.43
UBA3-209ENST00000466763 ZNF300Q96RE9 604 aaPredicted RBP12.38□□□□□ -0.43
UBA3-209ENST00000466763 TMEM43Q9BTV4 400 aa12.38□□□□□ -0.43
UBA3-209ENST00000466763 POLR2J2Q9GZM3 115 aaKnown RBP12.38□□□□□ -0.43
UBA3-209ENST00000466763 POLR2J3Q9H1A7 115 aaKnown RBP12.38□□□□□ -0.43
UBA3-209ENST00000466763 C19orf84I3L1E1 186 aa12.37□□□□□ -0.43
UBA3-209ENST00000466763 RAMP1O60894 148 aa12.37□□□□□ -0.43
UBA3-209ENST00000466763 LYPD3O95274 346 aa12.37□□□□□ -0.43
UBA3-209ENST00000466763 ATP6V1B2P21281 511 aa12.37□□□□□ -0.43
UBA3-209ENST00000466763 GRPRP30550 384 aa12.37□□□□□ -0.43
UBA3-209ENST00000466763 AGTR1P30556 359 aa12.37□□□□□ -0.43
UBA3-209ENST00000466763 MS4A2Q01362 244 aa12.37□□□□□ -0.43
UBA3-209ENST00000466763 FXNQ16595 210 aa12.37□□□□□ -0.43
UBA3-209ENST00000466763 HIST2H2BCQ6DN03 193 aa12.37□□□□□ -0.43
UBA3-209ENST00000466763 PAQR6Q6TCH4 344 aa12.37□□□□□ -0.43
UBA3-209ENST00000466763 CCDC121Q6ZUS5 278 aa12.37□□□□□ -0.43
UBA3-209ENST00000466763 NUFIP2Q7Z417 695 aaKnown RBP12.37□□□□□ -0.43
UBA3-209ENST00000466763 GPAT4Q86UL3 456 aa12.37□□□□□ -0.43
UBA3-209ENST00000466763 ZNF610Q8N9Z0 462 aa12.37□□□□□ -0.43
UBA3-209ENST00000466763 OR6K3Q8NGY3 331 aa12.37□□□□□ -0.43
UBA3-209ENST00000466763 TMEM255BQ8WV15 326 aa12.37□□□□□ -0.43
UBA3-209ENST00000466763 SEPHS2Q99611 448 aa12.37□□□□□ -0.43
UBA3-209ENST00000466763 PSD2Q9BQI7 771 aa12.37□□□□□ -0.43
UBA3-209ENST00000466763 PTDSS2Q9BVG9 487 aa12.37□□□□□ -0.43
UBA3-209ENST00000466763 RBM24Q9BX46 236 aaKnown RBP12.37□□□□□ -0.43
UBA3-209ENST00000466763 ASPNQ9BXN1 380 aa12.37□□□□□ -0.43
UBA3-209ENST00000466763 MUC13Q9H3R2 512 aa12.37□□□□□ -0.43
UBA3-209ENST00000466763 CHST11Q9NPF2 352 aa12.37□□□□□ -0.43
UBA3-209ENST00000466763 EMC3Q9P0I2 261 aa12.37□□□□□ -0.43
UBA3-209ENST00000466763 A4GNTQ9UNA3 340 aa12.37□□□□□ -0.43
UBA3-209ENST00000466763 ENPP4Q9Y6X5 453 aa12.37□□□□□ -0.43
UBA3-209ENST00000466763 HCFC1P51610 2035 aa12.37□□□□□ -0.43
UBA3-209ENST00000466763 LRRN3E7EW58 273 aa12.36□□□□□ -0.43
UBA3-209ENST00000466763 M0R082 166 aa12.36□□□□□ -0.43
UBA3-209ENST00000466763 GPR171O14626 319 aa12.36□□□□□ -0.43
UBA3-209ENST00000466763 MSTNO14793 375 aa12.36□□□□□ -0.43
UBA3-209ENST00000466763 DIRAS1O95057 198 aa12.36□□□□□ -0.43
UBA3-209ENST00000466763 CH25HO95992 272 aa12.36□□□□□ -0.43
UBA3-209ENST00000466763 THRBP10828 461 aa12.36□□□□□ -0.43
UBA3-209ENST00000466763 UMPSP11172 480 aa12.36□□□□□ -0.43
UBA3-209ENST00000466763 NQO1P15559 274 aaKnown RBP12.36□□□□□ -0.43
UBA3-209ENST00000466763 SNTB1Q13884 538 aaKnown RBP12.36□□□□□ -0.43
UBA3-209ENST00000466763 TRAM2Q15035 370 aa12.36□□□□□ -0.43
UBA3-209ENST00000466763 ABLIM2Q6H8Q1 611 aa12.36□□□□□ -0.43
UBA3-209ENST00000466763 LINC00114Q6XXX2 140 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms