RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 PLSCR4Q9NRQ2 329 aa10.37□□□□□ -0.75
CUX1-207ENST00000465461 GLRX2Q9NS18 164 aa10.37□□□□□ -0.75
CUX1-207ENST00000465461 RHCGQ9UBD6 479 aa10.37□□□□□ -0.75
CUX1-207ENST00000465461 PRSS50Q9UI38 385 aa10.37□□□□□ -0.75
CUX1-207ENST00000465461 SLC9A8Q9Y2E8 581 aa10.37□□□□□ -0.75
CUX1-207ENST00000465461 TRAPPC13A5PLN9 417 aa10.36□□□□□ -0.75
CUX1-207ENST00000465461 ZNF716A6NP11 495 aa10.36□□□□□ -0.75
CUX1-207ENST00000465461 FTCDNL1E5RQL4 147 aa10.36□□□□□ -0.75
CUX1-207ENST00000465461 KPNA4O00629 521 aaPredicted RBP10.36□□□□□ -0.75
CUX1-207ENST00000465461 MSTNO14793 375 aa10.36□□□□□ -0.75
CUX1-207ENST00000465461 FMO6PO60774 539 aa10.36□□□□□ -0.75
CUX1-207ENST00000465461 PDE5AO76074 875 aa10.36□□□□□ -0.75
CUX1-207ENST00000465461 IGHV3-9P01782 118 aa10.36□□□□□ -0.75
CUX1-207ENST00000465461 GPIP06744 558 aa10.36□□□□□ -0.75
CUX1-207ENST00000465461 CD8BP10966 210 aa10.36□□□□□ -0.75
CUX1-207ENST00000465461 IGFBP2P18065 325 aa10.36□□□□□ -0.75
CUX1-207ENST00000465461 P2RY4P51582 365 aa10.36□□□□□ -0.75
CUX1-207ENST00000465461 MAP2K6P52564 334 aa10.36□□□□□ -0.75
CUX1-207ENST00000465461 TAS2R41P59536 307 aa10.36□□□□□ -0.75
CUX1-207ENST00000465461 H3F3AP84243 136 aa10.36□□□□□ -0.75
CUX1-207ENST00000465461 TSC22D1Q15714 1073 aa10.36□□□□□ -0.75
CUX1-207ENST00000465461 FBXL19-AS1Q494R0 122 aa10.36□□□□□ -0.75
CUX1-207ENST00000465461 SAMD4BQ5PRF9 694 aaKnown RBP10.36□□□□□ -0.75
CUX1-207ENST00000465461 ANKRD34AQ69YU3 496 aa10.36□□□□□ -0.75
CUX1-207ENST00000465461 ZNF613Q6PF04 617 aa10.36□□□□□ -0.75
CUX1-207ENST00000465461 LINC00114Q6XXX2 140 aa10.36□□□□□ -0.75
CUX1-207ENST00000465461 NKAIN4Q8IVV8 208 aa10.36□□□□□ -0.75
CUX1-207ENST00000465461 DMRTC2Q8IXT2 367 aaPredicted RBP10.36□□□□□ -0.75
CUX1-207ENST00000465461 ZNF295-AS1Q8N0V1 137 aa10.36□□□□□ -0.75
CUX1-207ENST00000465461 SLC41A3Q96GZ6 507 aa10.36□□□□□ -0.75
CUX1-207ENST00000465461 CLPTM1LQ96KA5 538 aa10.36□□□□□ -0.75
CUX1-207ENST00000465461 PRSS27Q9BQR3 290 aa10.36□□□□□ -0.75
CUX1-207ENST00000465461 NAA11Q9BSU3 229 aaPredicted RBP10.36□□□□□ -0.75
CUX1-207ENST00000465461 EVA1AQ9H8M9 152 aa10.36□□□□□ -0.75
CUX1-207ENST00000465461 BCO1Q9HAY6 547 aa10.36□□□□□ -0.75
CUX1-207ENST00000465461 C12orf10Q9HB07 376 aa10.36□□□□□ -0.75
CUX1-207ENST00000465461 KLHL9Q9P2J3 617 aa10.36□□□□□ -0.75
CUX1-207ENST00000465461 TRAV36DV7A0A075B6V5 113 aa10.35□□□□□ -0.75
CUX1-207ENST00000465461 CHP2O43745 196 aa10.35□□□□□ -0.75
CUX1-207ENST00000465461 HSD17B1P14061 328 aa10.35□□□□□ -0.75
CUX1-207ENST00000465461 POU2F1P14859 743 aa10.35□□□□□ -0.75
CUX1-207ENST00000465461 GRPRP30550 384 aa10.35□□□□□ -0.75
CUX1-207ENST00000465461 MNAT1P51948 309 aa10.35□□□□□ -0.75
CUX1-207ENST00000465461 LSM11P83369 360 aaKnown RBP eCLIP10.35□□□□□ -0.75
CUX1-207ENST00000465461 IFI44LQ53G44 452 aa10.35□□□□□ -0.75
CUX1-207ENST00000465461 EEF1A1P5Q5VTE0 462 aa10.35□□□□□ -0.75
CUX1-207ENST00000465461 TMEM225Q6GV28 225 aa10.35□□□□□ -0.75
CUX1-207ENST00000465461 TTC33Q6PID6 262 aaPredicted RBP10.35□□□□□ -0.75
CUX1-207ENST00000465461 PAQR6Q6TCH4 344 aa10.35□□□□□ -0.75
CUX1-207ENST00000465461 TFAP2EQ6VUC0 442 aa10.35□□□□□ -0.75
CUX1-207ENST00000465461 TSEN54Q7Z6J9 526 aaKnown RBP10.35□□□□□ -0.75
CUX1-207ENST00000465461 GPAT4Q86UL3 456 aa10.35□□□□□ -0.75
CUX1-207ENST00000465461 C10orf53Q8N6V4 93 aa10.35□□□□□ -0.75
CUX1-207ENST00000465461 ACBD4Q8NC06 268 aa10.35□□□□□ -0.75
CUX1-207ENST00000465461 PFN4Q8NHR9 129 aa10.35□□□□□ -0.75
CUX1-207ENST00000465461 MFSD8Q8NHS3 518 aa10.35□□□□□ -0.75
CUX1-207ENST00000465461 PIGXQ8TBF5 258 aa10.35□□□□□ -0.75
CUX1-207ENST00000465461 TMEM255BQ8WV15 326 aa10.35□□□□□ -0.75
CUX1-207ENST00000465461 LZICQ8WZA0 190 aa10.35□□□□□ -0.75
CUX1-207ENST00000465461 MOGAT1Q96PD6 335 aa10.35□□□□□ -0.75
CUX1-207ENST00000465461 SPOCK3Q9BQ16 436 aa10.35□□□□□ -0.75
CUX1-207ENST00000465461 KLHL4Q9C0H6 718 aa10.35□□□□□ -0.75
CUX1-207ENST00000465461 NDE1Q9NXR1 346 aa10.35□□□□□ -0.75
CUX1-207ENST00000465461 TAS2R1Q9NYW7 299 aa10.35□□□□□ -0.75
CUX1-207ENST00000465461 CRIM1Q9NZV1 1036 aa10.35□□□□□ -0.75
CUX1-207ENST00000465461 RIMS3Q9UJD0 308 aa10.35□□□□□ -0.75
CUX1-207ENST00000465461 PRDM4Q9UKN5 801 aa10.35□□□□□ -0.75
CUX1-207ENST00000465461 A4GNTQ9UNA3 340 aa10.35□□□□□ -0.75
CUX1-207ENST00000465461 AQP7P3A6NL99 342 aa10.34□□□□□ -0.75
CUX1-207ENST00000465461 ZNF724A8MTY0 619 aa10.34□□□□□ -0.75
CUX1-207ENST00000465461 hCG_2039718K7EN88 272 aa10.34□□□□□ -0.75
CUX1-207ENST00000465461 M0R082 166 aa10.34□□□□□ -0.75
CUX1-207ENST00000465461 FFAR1O14842 300 aa10.34□□□□□ -0.75
CUX1-207ENST00000465461 ARPC2O15144 300 aa10.34□□□□□ -0.75
CUX1-207ENST00000465461 HNRNPRO43390 633 aaKnown RBP10.34□□□□□ -0.75
CUX1-207ENST00000465461 DNPH1O43598 174 aa10.34□□□□□ -0.75
CUX1-207ENST00000465461 PIP5K1CO60331 668 aa10.34□□□□□ -0.75
CUX1-207ENST00000465461 EIF1BO60739 113 aaKnown RBP10.34□□□□□ -0.75
CUX1-207ENST00000465461 DIRAS1O95057 198 aa10.34□□□□□ -0.75
CUX1-207ENST00000465461 BGLAPP02818 100 aa10.34□□□□□ -0.75
CUX1-207ENST00000465461 GTF2E2P29084 291 aaKnown RBP10.34□□□□□ -0.75
CUX1-207ENST00000465461 CD79BP40259 229 aa10.34□□□□□ -0.75
CUX1-207ENST00000465461 KIR2DL3P43628 341 aa10.34□□□□□ -0.75
CUX1-207ENST00000465461 UGT2B15P54855 530 aa10.34□□□□□ -0.75
CUX1-207ENST00000465461 SLC17A1Q14916 467 aa10.34□□□□□ -0.75
CUX1-207ENST00000465461 FAM69AQ5T7M9 428 aa10.34□□□□□ -0.75
CUX1-207ENST00000465461 CYP2R1Q6VVX0 501 aa10.34□□□□□ -0.75
CUX1-207ENST00000465461 C22orf34Q6ZV56 151 aa10.34□□□□□ -0.75
CUX1-207ENST00000465461 GALNT5Q7Z7M9 940 aa10.34□□□□□ -0.75
CUX1-207ENST00000465461 MEX3DQ86XN8 651 aaKnown RBP10.34□□□□□ -0.75
CUX1-207ENST00000465461 LRRC17Q8N6Y2 441 aa10.34□□□□□ -0.75
CUX1-207ENST00000465461 ZIC4Q8N9L1 334 aa10.34□□□□□ -0.75
CUX1-207ENST00000465461 ZNF417Q8TAU3 575 aa10.34□□□□□ -0.75
CUX1-207ENST00000465461 LRRC46Q96FV0 321 aa10.34□□□□□ -0.75
CUX1-207ENST00000465461 ZNF385AQ96PM9 386 aaKnown RBP10.34□□□□□ -0.75
CUX1-207ENST00000465461 ZNF587Q96SQ5 575 aaPredicted RBP10.34□□□□□ -0.75
CUX1-207ENST00000465461 MEPEQ9NQ76 525 aaPredicted RBP10.34□□□□□ -0.75
CUX1-207ENST00000465461 DCAF13Q9NV06 445 aaKnown RBP10.34□□□□□ -0.75
CUX1-207ENST00000465461 C6orf203Q9P0P8 240 aaPredicted RBP10.34□□□□□ -0.75
CUX1-207ENST00000465461 RPS6KA6Q9UK32 745 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms