RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 A0A1W2PS29 197 aa8.4□□□□□ -1.06
HPS4-208ENST00000464362 OR5K4A6NMS3 321 aa8.4□□□□□ -1.06
HPS4-208ENST00000464362 ACOT7O00154 380 aa8.4□□□□□ -1.06
HPS4-208ENST00000464362 ZNF208O43345 1280 aa8.4□□□□□ -1.06
HPS4-208ENST00000464362 HTR3BO95264 441 aa8.4□□□□□ -1.06
HPS4-208ENST00000464362 SBK2P0C263 348 aa8.4□□□□□ -1.06
HPS4-208ENST00000464362 UBL4AP11441 157 aa8.4□□□□□ -1.06
HPS4-208ENST00000464362 PSMB1P20618 241 aaKnown RBP8.4□□□□□ -1.06
HPS4-208ENST00000464362 MAOAP21397 527 aa8.4□□□□□ -1.06
HPS4-208ENST00000464362 FPR3P25089 353 aa8.4□□□□□ -1.06
HPS4-208ENST00000464362 CD34P28906 385 aa8.4□□□□□ -1.06
HPS4-208ENST00000464362 RPL35P42766 123 aaKnown RBP8.4□□□□□ -1.06
HPS4-208ENST00000464362 SORDQ00796 357 aa8.4□□□□□ -1.06
HPS4-208ENST00000464362 LTBQ06643 244 aa8.4□□□□□ -1.06
HPS4-208ENST00000464362 ZNF77Q15935 545 aa8.4□□□□□ -1.06
HPS4-208ENST00000464362 OCLNQ16625 522 aa8.4□□□□□ -1.06
HPS4-208ENST00000464362 DMRTC1Q5HYR2 192 aa8.4□□□□□ -1.06
HPS4-208ENST00000464362 SLC18B1Q6NT16 456 aa8.4□□□□□ -1.06
HPS4-208ENST00000464362 OR2A1Q8NGT9 310 aa8.4□□□□□ -1.06
HPS4-208ENST00000464362 SFXN5Q8TD22 340 aa8.4□□□□□ -1.06
HPS4-208ENST00000464362 INTS14Q96SY0 518 aa8.4□□□□□ -1.06
HPS4-208ENST00000464362 TIMM29Q9BSF4 260 aa8.4□□□□□ -1.06
HPS4-208ENST00000464362 BTBD2Q9BX70 525 aa8.4□□□□□ -1.06
HPS4-208ENST00000464362 HOXD1Q9GZZ0 328 aa8.4□□□□□ -1.06
HPS4-208ENST00000464362 NDUFB11Q9NX14 153 aa8.4□□□□□ -1.06
HPS4-208ENST00000464362 ADAM29Q9UKF5 820 aa8.4□□□□□ -1.06
HPS4-208ENST00000464362 TMPRSS11EQ9UL52 423 aa8.4□□□□□ -1.06
HPS4-208ENST00000464362 DOCK1Q14185 1865 aa8.4□□□□□ -1.06
HPS4-208ENST00000464362 KCNE1BA0A087WTH5 132 aa8.4□□□□□ -1.06
HPS4-208ENST00000464362 TRABD2BA6NFA1 517 aa8.4□□□□□ -1.06
HPS4-208ENST00000464362 SEC14L5O43304 696 aa8.4□□□□□ -1.06
HPS4-208ENST00000464362 FGF17O60258 216 aa8.4□□□□□ -1.06
HPS4-208ENST00000464362 SC5DO75845 299 aa8.4□□□□□ -1.06
HPS4-208ENST00000464362 IFNA21P01568 189 aa8.4□□□□□ -1.06
HPS4-208ENST00000464362 ZP2Q05996 745 aa8.4□□□□□ -1.06
HPS4-208ENST00000464362 STK11Q15831 433 aa8.4□□□□□ -1.06
HPS4-208ENST00000464362 FAM76BQ5HYJ3 339 aa8.4□□□□□ -1.06
HPS4-208ENST00000464362 FBXO42Q6P3S6 717 aa8.4□□□□□ -1.06
HPS4-208ENST00000464362 HCAR1Q9BXC0 346 aa8.4□□□□□ -1.06
HPS4-208ENST00000464362 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.4□□□□□ -1.06
HPS4-208ENST00000464362 SRRQ9GZT4 340 aa8.4□□□□□ -1.06
HPS4-208ENST00000464362 NT5DC2Q9H857 520 aa8.4□□□□□ -1.06
HPS4-208ENST00000464362 ACOXLQ9NUZ1 547 aa8.4□□□□□ -1.06
HPS4-208ENST00000464362 TET1Q8NFU7 2136 aa8.4□□□□□ -1.07
HPS4-208ENST00000464362 A0A0J9YY10 115 aa8.4□□□□□ -1.07
HPS4-208ENST00000464362 TNFRSF10AO00220 468 aa8.4□□□□□ -1.07
HPS4-208ENST00000464362 MAN2B1O00754 1011 aa8.4□□□□□ -1.07
HPS4-208ENST00000464362 FOSL2P15408 326 aa8.4□□□□□ -1.07
HPS4-208ENST00000464362 AMY2BP19961 511 aa8.4□□□□□ -1.07
HPS4-208ENST00000464362 FBLP22087 321 aaKnown RBP8.4□□□□□ -1.07
HPS4-208ENST00000464362 PRPS1P60891 318 aa8.4□□□□□ -1.07
HPS4-208ENST00000464362 TLE3Q04726 772 aa8.4□□□□□ -1.07
HPS4-208ENST00000464362 PRAMEF8Q5VWM4 474 aa8.4□□□□□ -1.07
HPS4-208ENST00000464362 PRAMEF7Q5VXH5 474 aa8.4□□□□□ -1.07
HPS4-208ENST00000464362 ZNF620Q6ZNG0 422 aa8.4□□□□□ -1.07
HPS4-208ENST00000464362 TMEM150AQ86TG1 271 aa8.4□□□□□ -1.07
HPS4-208ENST00000464362 LSRQ86X29 649 aaPredicted RBP8.4□□□□□ -1.07
HPS4-208ENST00000464362 MCEMP1Q8IX19 187 aa8.4□□□□□ -1.07
HPS4-208ENST00000464362 MFSD9Q8NBP5 474 aa8.4□□□□□ -1.07
HPS4-208ENST00000464362 DIO2Q92813 273 aa8.4□□□□□ -1.07
HPS4-208ENST00000464362 TOMM40LQ969M1 308 aa8.4□□□□□ -1.07
HPS4-208ENST00000464362 ZC3H10Q96K80 434 aaKnown RBP8.4□□□□□ -1.07
HPS4-208ENST00000464362 TOX2Q96NM4 488 aa8.4□□□□□ -1.07
HPS4-208ENST00000464362 ASF1BQ9NVP2 202 aa8.4□□□□□ -1.07
HPS4-208ENST00000464362 CBLCQ9ULV8 474 aa8.4□□□□□ -1.07
HPS4-208ENST00000464362 ASB4Q9Y574 426 aa8.4□□□□□ -1.07
HPS4-208ENST00000464362 COL11A1P12107 1806 aaPredicted RBP8.39□□□□□ -1.07
HPS4-208ENST00000464362 TMEM129A0AVI4 362 aa8.39□□□□□ -1.07
HPS4-208ENST00000464362 F5H5K5 113 aa8.39□□□□□ -1.07
HPS4-208ENST00000464362 F5H5P2 479 aa8.39□□□□□ -1.07
HPS4-208ENST00000464362 ICMTO60725 284 aa8.39□□□□□ -1.07
HPS4-208ENST00000464362 LDOC1O95751 146 aaPredicted RBP8.39□□□□□ -1.07
HPS4-208ENST00000464362 RBMXP38159 391 aaKnown RBP8.39□□□□□ -1.07
HPS4-208ENST00000464362 OR7A5Q15622 319 aa8.39□□□□□ -1.07
HPS4-208ENST00000464362 TSC22D1Q15714 1073 aa8.39□□□□□ -1.07
HPS4-208ENST00000464362 SLC22A6Q4U2R8 563 aa8.39□□□□□ -1.07
HPS4-208ENST00000464362 TCTE1Q5JU00 501 aa8.39□□□□□ -1.07
HPS4-208ENST00000464362 EEF1A1P5Q5VTE0 462 aa8.39□□□□□ -1.07
HPS4-208ENST00000464362 AWAT2Q6E213 333 aa8.39□□□□□ -1.07
HPS4-208ENST00000464362 PLPP7Q8NBV4 271 aa8.39□□□□□ -1.07
HPS4-208ENST00000464362 OR56B4Q8NH76 319 aa8.39□□□□□ -1.07
HPS4-208ENST00000464362 CD300LFQ8TDQ1 290 aa8.39□□□□□ -1.07
HPS4-208ENST00000464362 TMEM234Q8WY98 164 aa8.39□□□□□ -1.07
HPS4-208ENST00000464362 ZDHHC12Q96GR4 267 aa8.39□□□□□ -1.07
HPS4-208ENST00000464362 SEMA4CQ9C0C4 833 aa8.39□□□□□ -1.07
HPS4-208ENST00000464362 C6orf106Q9H6K1 298 aaPredicted RBP8.39□□□□□ -1.07
HPS4-208ENST00000464362 LIN7BQ9HAP6 207 aa8.39□□□□□ -1.07
HPS4-208ENST00000464362 ZNF304Q9HCX3 659 aa8.39□□□□□ -1.07
HPS4-208ENST00000464362 EVA1BQ9NVM1 165 aa8.39□□□□□ -1.07
HPS4-208ENST00000464362 GPR55Q9Y2T6 319 aaPredicted RBP8.39□□□□□ -1.07
HPS4-208ENST00000464362 NOX1Q9Y5S8 564 aa8.39□□□□□ -1.07
HPS4-208ENST00000464362 COL11A2P13942 1736 aaPredicted RBP8.39□□□□□ -1.07
HPS4-208ENST00000464362 ZNF736B4DX44 427 aaPredicted RBP8.39□□□□□ -1.07
HPS4-208ENST00000464362 SYT5O00445 386 aa8.39□□□□□ -1.07
HPS4-208ENST00000464362 SYT7O43581 403 aa8.39□□□□□ -1.07
HPS4-208ENST00000464362 EGFP01133 1207 aa8.39□□□□□ -1.07
HPS4-208ENST00000464362 ANXA7P20073 488 aaKnown RBP8.39□□□□□ -1.07
HPS4-208ENST00000464362 MAGEB1P43366 347 aa8.39□□□□□ -1.07
HPS4-208ENST00000464362 ZNF616Q08AN1 781 aa8.39□□□□□ -1.07
HPS4-208ENST00000464362 LINC00346Q8IVM7 164 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms