RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 P2RY8Q86VZ1 359 aa8.97□□□□□ -0.97
SF3A3-204ENST00000462258 ZNF433Q8N7K0 673 aaPredicted RBP8.97□□□□□ -0.97
SF3A3-204ENST00000462258 ZNF611Q8N823 705 aa8.97□□□□□ -0.97
SF3A3-204ENST00000462258 HIPK4Q8NE63 616 aa8.97□□□□□ -0.97
SF3A3-204ENST00000462258 KBTBD8Q8NFY9 601 aa8.97□□□□□ -0.97
SF3A3-204ENST00000462258 OR9K2Q8NGE7 335 aa8.97□□□□□ -0.97
SF3A3-204ENST00000462258 OR52E4Q8NGH9 312 aa8.97□□□□□ -0.97
SF3A3-204ENST00000462258 TMEM171Q8WVE6 324 aa8.97□□□□□ -0.97
SF3A3-204ENST00000462258 IGFBPL1Q8WX77 278 aa8.97□□□□□ -0.97
SF3A3-204ENST00000462258 FBXW5Q969U6 566 aa8.97□□□□□ -0.97
SF3A3-204ENST00000462258 TMEM45BQ96B21 275 aa8.97□□□□□ -0.97
SF3A3-204ENST00000462258 SF3B5Q9BWJ5 86 aaKnown RBP8.97□□□□□ -0.97
SF3A3-204ENST00000462258 TMEM38AQ9H6F2 299 aa8.97□□□□□ -0.97
SF3A3-204ENST00000462258 NPAP1Q9NZP6 1156 aa8.97□□□□□ -0.97
SF3A3-204ENST00000462258 RPS6KB2Q9UBS0 482 aa8.97□□□□□ -0.97
SF3A3-204ENST00000462258 TESQ9UGI8 421 aaKnown RBP8.97□□□□□ -0.97
SF3A3-204ENST00000462258 PRORSD1PA6NEY8 169 aa8.96□□□□□ -0.98
SF3A3-204ENST00000462258 ELOA3DA6NLF2 546 aaPredicted RBP8.96□□□□□ -0.98
SF3A3-204ENST00000462258 CCT8L1PA6NM43 557 aa8.96□□□□□ -0.98
SF3A3-204ENST00000462258 NPIPB7O75200 414 aa8.96□□□□□ -0.98
SF3A3-204ENST00000462258 ITGA5P08648 1049 aa8.96□□□□□ -0.98
SF3A3-204ENST00000462258 GPX2P18283 190 aa8.96□□□□□ -0.98
SF3A3-204ENST00000462258 PTH2RP49190 550 aa8.96□□□□□ -0.98
SF3A3-204ENST00000462258 P2RY4P51582 365 aa8.96□□□□□ -0.98
SF3A3-204ENST00000462258 RGS8P57771 180 aaPredicted RBP8.96□□□□□ -0.98
SF3A3-204ENST00000462258 NFYCQ13952 458 aa8.96□□□□□ -0.98
SF3A3-204ENST00000462258 SELPLGQ14242 412 aa8.96□□□□□ -0.98
SF3A3-204ENST00000462258 ADRM1Q16186 407 aa8.96□□□□□ -0.98
SF3A3-204ENST00000462258 ELOA3BQ3SY89 546 aa8.96□□□□□ -0.98
SF3A3-204ENST00000462258 GLIPR1L2Q4G1C9 344 aa8.96□□□□□ -0.98
SF3A3-204ENST00000462258 RUNDC3AQ59EK9 446 aa8.96□□□□□ -0.98
SF3A3-204ENST00000462258 C9orf135Q5VTT2 229 aa8.96□□□□□ -0.98
SF3A3-204ENST00000462258 C6orf89Q6UWU4 347 aa8.96□□□□□ -0.98
SF3A3-204ENST00000462258 YTHDF3Q7Z739 585 aaKnown RBP8.96□□□□□ -0.98
SF3A3-204ENST00000462258 RETREG3Q86VR2 466 aa8.96□□□□□ -0.98
SF3A3-204ENST00000462258 DPP10Q8N608 796 aa8.96□□□□□ -0.98
SF3A3-204ENST00000462258 C11orf65Q8NCR3 313 aa8.96□□□□□ -0.98
SF3A3-204ENST00000462258 ELOA3Q8NG57 546 aa8.96□□□□□ -0.98
SF3A3-204ENST00000462258 OR52N5Q8NH56 324 aa8.96□□□□□ -0.98
SF3A3-204ENST00000462258 STK35Q8TDR2 534 aa8.96□□□□□ -0.98
SF3A3-204ENST00000462258 MUCL1Q96DR8 90 aa8.96□□□□□ -0.98
SF3A3-204ENST00000462258 ANKRD27Q96NW4 1050 aa8.96□□□□□ -0.98
SF3A3-204ENST00000462258 ZNF385AQ96PM9 386 aaKnown RBP8.96□□□□□ -0.98
SF3A3-204ENST00000462258 ZNF607Q96SK3 696 aa8.96□□□□□ -0.98
SF3A3-204ENST00000462258 CGREF1Q99674 301 aa8.96□□□□□ -0.98
SF3A3-204ENST00000462258 PTDSS2Q9BVG9 487 aa8.96□□□□□ -0.98
SF3A3-204ENST00000462258 TMEM120AQ9BXJ8 343 aa8.96□□□□□ -0.98
SF3A3-204ENST00000462258 GSX2Q9BZM3 304 aa8.96□□□□□ -0.98
SF3A3-204ENST00000462258 CXorf56Q9H5V9 222 aa8.96□□□□□ -0.98
SF3A3-204ENST00000462258 C12orf10Q9HB07 376 aa8.96□□□□□ -0.98
SF3A3-204ENST00000462258 PARPBPQ9NWS1 579 aa8.96□□□□□ -0.98
SF3A3-204ENST00000462258 UPB1Q9UBR1 384 aa8.96□□□□□ -0.98
SF3A3-204ENST00000462258 SLC13A4Q9UKG4 626 aa8.96□□□□□ -0.98
SF3A3-204ENST00000462258 CADP27708 2225 aa8.95□□□□□ -0.98
SF3A3-204ENST00000462258 A0A1B0GWA3 101 aa8.95□□□□□ -0.98
SF3A3-204ENST00000462258 A0A1W2PR80 420 aa8.95□□□□□ -0.98
SF3A3-204ENST00000462258 DPRXA6NFQ7 191 aa8.95□□□□□ -0.98
SF3A3-204ENST00000462258 FTCDNL1E5RQL4 147 aa8.95□□□□□ -0.98
SF3A3-204ENST00000462258 PDLIM1O00151 329 aa8.95□□□□□ -0.98
SF3A3-204ENST00000462258 ABCD4O14678 606 aa8.95□□□□□ -0.98
SF3A3-204ENST00000462258 TPST1O60507 370 aa8.95□□□□□ -0.98
SF3A3-204ENST00000462258 TMCC2O75069 709 aa8.95□□□□□ -0.98
SF3A3-204ENST00000462258 SERPINB7O75635 380 aa8.95□□□□□ -0.98
SF3A3-204ENST00000462258 VAMP5O95183 116 aa8.95□□□□□ -0.98
SF3A3-204ENST00000462258 TROVE2P10155 538 aaKnown RBP eCLIP8.95□□□□□ -0.98
SF3A3-204ENST00000462258 PNMTP11086 282 aa8.95□□□□□ -0.98
SF3A3-204ENST00000462258 FOSL1P15407 271 aa8.95□□□□□ -0.98
SF3A3-204ENST00000462258 RPS5P46782 204 aaKnown RBP8.95□□□□□ -0.98
SF3A3-204ENST00000462258 CDH11P55287 796 aa8.95□□□□□ -0.98
SF3A3-204ENST00000462258 FOXG1P55316 489 aaPredicted RBP8.95□□□□□ -0.98
SF3A3-204ENST00000462258 PCBP3P57721 371 aaKnown RBP8.95□□□□□ -0.98
SF3A3-204ENST00000462258 RPS4XP62701 263 aaKnown RBP8.95□□□□□ -0.98
SF3A3-204ENST00000462258 EGR4Q05215 589 aa8.95□□□□□ -0.98
SF3A3-204ENST00000462258 RBBP4Q09028 425 aa8.95□□□□□ -0.98
SF3A3-204ENST00000462258 GABRA6Q16445 453 aa8.95□□□□□ -0.98
SF3A3-204ENST00000462258 TRMT5Q32P41 509 aaKnown RBP8.95□□□□□ -0.98
SF3A3-204ENST00000462258 ZNF672Q499Z4 452 aaPredicted RBP8.95□□□□□ -0.98
SF3A3-204ENST00000462258 ALG10BQ5I7T1 473 aa8.95□□□□□ -0.98
SF3A3-204ENST00000462258 TSPO2Q5TGU0 170 aa8.95□□□□□ -0.98
SF3A3-204ENST00000462258 OR7E24Q6IFN5 339 aa8.95□□□□□ -0.98
SF3A3-204ENST00000462258 AAED1Q7RTV5 226 aa8.95□□□□□ -0.98
SF3A3-204ENST00000462258 PTOV1Q86YD1 416 aa8.95□□□□□ -0.98
SF3A3-204ENST00000462258 ARMC8Q8IUR7 673 aa8.95□□□□□ -0.98
SF3A3-204ENST00000462258 C17orf78Q8N4C9 275 aa8.95□□□□□ -0.98
SF3A3-204ENST00000462258 LSMEM1Q8N8F7 131 aa8.95□□□□□ -0.98
SF3A3-204ENST00000462258 C1orf162Q8NEQ5 155 aaPredicted RBP8.95□□□□□ -0.98
SF3A3-204ENST00000462258 BHLHE22Q8NFJ8 381 aaPredicted RBP8.95□□□□□ -0.98
SF3A3-204ENST00000462258 LILRB1Q8NHL6 650 aaPredicted RBP8.95□□□□□ -0.98
SF3A3-204ENST00000462258 MFSD8Q8NHS3 518 aa8.95□□□□□ -0.98
SF3A3-204ENST00000462258 TSPEARQ8WU66 669 aa8.95□□□□□ -0.98
SF3A3-204ENST00000462258 NEUROG1Q92886 237 aa8.95□□□□□ -0.98
SF3A3-204ENST00000462258 KTI12Q96EK9 354 aaPredicted RBP8.95□□□□□ -0.98
SF3A3-204ENST00000462258 C18orf12Q96KH6 178 aa8.95□□□□□ -0.98
SF3A3-204ENST00000462258 Q96MF0 132 aa8.95□□□□□ -0.98
SF3A3-204ENST00000462258 ALKBH3Q96Q83 286 aaPredicted RBP8.95□□□□□ -0.98
SF3A3-204ENST00000462258 RSPO3Q9BXY4 272 aaPredicted RBP8.95□□□□□ -0.98
SF3A3-204ENST00000462258 TRIM2Q9C040 744 aa8.95□□□□□ -0.98
SF3A3-204ENST00000462258 AMBRA1Q9C0C7 1298 aa8.95□□□□□ -0.98
SF3A3-204ENST00000462258 SLCO5A1Q9H2Y9 848 aa8.95□□□□□ -0.98
SF3A3-204ENST00000462258 PIF1Q9H611 641 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms