RNA–Protein interactions for RNA: ENST00000460739.5

SOX2-OT-201, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 609 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-201ENST00000460739 ATP6V1G3Q96LB4 118 aa10.38□□□□□ -0.75
SOX2-OT-201ENST00000460739 TRAF4Q9BUZ4 470 aaPredicted RBP10.38□□□□□ -0.75
SOX2-OT-201ENST00000460739 SLCO1B3Q9NPD5 702 aa10.38□□□□□ -0.75
SOX2-OT-201ENST00000460739 SLC52A3Q9NQ40 469 aa10.38□□□□□ -0.75
SOX2-OT-201ENST00000460739 SLC7A10Q9NS82 523 aa10.38□□□□□ -0.75
SOX2-OT-201ENST00000460739 FAIMQ9NVQ4 179 aa10.38□□□□□ -0.75
SOX2-OT-201ENST00000460739 DCTN4Q9UJW0 460 aa10.38□□□□□ -0.75
SOX2-OT-201ENST00000460739 MGAT4BQ9UQ53 548 aa10.38□□□□□ -0.75
SOX2-OT-201ENST00000460739 FN1P02751 2386 aaKnown RBP10.37□□□□□ -0.75
SOX2-OT-201ENST00000460739 TMEM229AB2RXF0 380 aa10.37□□□□□ -0.75
SOX2-OT-201ENST00000460739 FRS3O43559 492 aa10.37□□□□□ -0.75
SOX2-OT-201ENST00000460739 NPIPB7O75200 414 aa10.37□□□□□ -0.75
SOX2-OT-201ENST00000460739 VAMP5O95183 116 aa10.37□□□□□ -0.75
SOX2-OT-201ENST00000460739 CD8AP01732 235 aa10.37□□□□□ -0.75
SOX2-OT-201ENST00000460739 CR1P17927 2039 aa10.37□□□□□ -0.75
SOX2-OT-201ENST00000460739 NCF2P19878 526 aaPredicted RBP10.37□□□□□ -0.75
SOX2-OT-201ENST00000460739 CDKN1AP38936 164 aa10.37□□□□□ -0.75
SOX2-OT-201ENST00000460739 ZNF83P51522 516 aa10.37□□□□□ -0.75
SOX2-OT-201ENST00000460739 P2RY4P51582 365 aa10.37□□□□□ -0.75
SOX2-OT-201ENST00000460739 CDH11P55287 796 aa10.37□□□□□ -0.75
SOX2-OT-201ENST00000460739 IRX1P78414 480 aaPredicted RBP10.37□□□□□ -0.75
SOX2-OT-201ENST00000460739 TGFBR3Q03167 851 aa10.37□□□□□ -0.75
SOX2-OT-201ENST00000460739 BNIP2Q12982 314 aa10.37□□□□□ -0.75
SOX2-OT-201ENST00000460739 TNK1Q13470 666 aa10.37□□□□□ -0.75
SOX2-OT-201ENST00000460739 C1orf140Q5VVS0 124 aa10.37□□□□□ -0.75
SOX2-OT-201ENST00000460739 C17orf78Q8N4C9 275 aa10.37□□□□□ -0.75
SOX2-OT-201ENST00000460739 BBS10Q8TAM1 723 aa10.37□□□□□ -0.75
SOX2-OT-201ENST00000460739 MAL2Q969L2 176 aa10.37□□□□□ -0.75
SOX2-OT-201ENST00000460739 GTPBP3Q969Y2 492 aaKnown RBP10.37□□□□□ -0.75
SOX2-OT-201ENST00000460739 BOD1Q96IK1 185 aa10.37□□□□□ -0.75
SOX2-OT-201ENST00000460739 EBF4Q9BQW3 602 aa10.37□□□□□ -0.75
SOX2-OT-201ENST00000460739 CCDC28BQ9BUN5 200 aa10.37□□□□□ -0.75
SOX2-OT-201ENST00000460739 TAPBPLQ9BX59 468 aa10.37□□□□□ -0.75
SOX2-OT-201ENST00000460739 CACYBPQ9HB71 228 aaKnown RBP10.37□□□□□ -0.75
SOX2-OT-201ENST00000460739 TMEM45AQ9NWC5 275 aa10.37□□□□□ -0.75
SOX2-OT-201ENST00000460739 SLC25A37Q9NYZ2 338 aa10.37□□□□□ -0.75
SOX2-OT-201ENST00000460739 UPB1Q9UBR1 384 aa10.37□□□□□ -0.75
SOX2-OT-201ENST00000460739 GMEB1Q9Y692 573 aa10.37□□□□□ -0.75
SOX2-OT-201ENST00000460739 TLN2Q9Y4G6 2542 aa10.37□□□□□ -0.75
SOX2-OT-201ENST00000460739 A0A1W2PR80 420 aa10.36□□□□□ -0.75
SOX2-OT-201ENST00000460739 C5orf58C9J3I9 102 aa10.36□□□□□ -0.75
SOX2-OT-201ENST00000460739 ETS2P15036 469 aa10.36□□□□□ -0.75
SOX2-OT-201ENST00000460739 PPIBP23284 216 aaKnown RBP10.36□□□□□ -0.75
SOX2-OT-201ENST00000460739 CD40P25942 277 aa10.36□□□□□ -0.75
SOX2-OT-201ENST00000460739 MPGP29372 298 aa10.36□□□□□ -0.75
SOX2-OT-201ENST00000460739 AQP5P55064 265 aa10.36□□□□□ -0.75
SOX2-OT-201ENST00000460739 CLEC12BQ2HXU8 276 aa10.36□□□□□ -0.75
SOX2-OT-201ENST00000460739 TTMPQ5BVD1 217 aa10.36□□□□□ -0.75
SOX2-OT-201ENST00000460739 TMEM225Q6GV28 225 aa10.36□□□□□ -0.75
SOX2-OT-201ENST00000460739 DNM1P46Q6ZS02 220 aa10.36□□□□□ -0.75
SOX2-OT-201ENST00000460739 AAED1Q7RTV5 226 aa10.36□□□□□ -0.75
SOX2-OT-201ENST00000460739 GPAT4Q86UL3 456 aa10.36□□□□□ -0.75
SOX2-OT-201ENST00000460739 WDR31Q8NA23 367 aa10.36□□□□□ -0.75
SOX2-OT-201ENST00000460739 POMGNT2Q8NAT1 580 aa10.36□□□□□ -0.75
SOX2-OT-201ENST00000460739 STK35Q8TDR2 534 aa10.36□□□□□ -0.75
SOX2-OT-201ENST00000460739 SPDL1Q96EA4 605 aa10.36□□□□□ -0.75
SOX2-OT-201ENST00000460739 ZNF385AQ96PM9 386 aaKnown RBP10.36□□□□□ -0.75
SOX2-OT-201ENST00000460739 RSPO3Q9BXY4 272 aaPredicted RBP10.36□□□□□ -0.75
SOX2-OT-201ENST00000460739 SLCO5A1Q9H2Y9 848 aa10.36□□□□□ -0.75
SOX2-OT-201ENST00000460739 ALG2Q9H553 416 aa10.36□□□□□ -0.75
SOX2-OT-201ENST00000460739 SLC17A5Q9NRA2 495 aa10.36□□□□□ -0.75
SOX2-OT-201ENST00000460739 ADPRHL2Q9NX46 363 aa10.36□□□□□ -0.75
SOX2-OT-201ENST00000460739 CCDC167Q9P0B6 97 aa10.36□□□□□ -0.75
SOX2-OT-201ENST00000460739 SLAMF8Q9P0V8 285 aa10.36□□□□□ -0.75
SOX2-OT-201ENST00000460739 AMDHD2Q9Y303 409 aa10.36□□□□□ -0.75
SOX2-OT-201ENST00000460739 HEATR1Q9H583 2144 aaKnown RBP10.36□□□□□ -0.75
SOX2-OT-201ENST00000460739 PLCE1Q9P212 2302 aa10.35□□□□□ -0.75
SOX2-OT-201ENST00000460739 TRBV5-3A0A0A0MS03 114 aa10.35□□□□□ -0.75
SOX2-OT-201ENST00000460739 FTCDNL1E5RQL4 147 aa10.35□□□□□ -0.75
SOX2-OT-201ENST00000460739 E7EQL1 145 aa10.35□□□□□ -0.75
SOX2-OT-201ENST00000460739 M0R1B8 84 aa10.35□□□□□ -0.75
SOX2-OT-201ENST00000460739 FZD7O75084 574 aa10.35□□□□□ -0.75
SOX2-OT-201ENST00000460739 IGHV4-39P01824 125 aa10.35□□□□□ -0.75
SOX2-OT-201ENST00000460739 ARAFP10398 606 aa10.35□□□□□ -0.75
SOX2-OT-201ENST00000460739 PRKAR1BP31321 381 aa10.35□□□□□ -0.75
SOX2-OT-201ENST00000460739 TTKP33981 857 aa10.35□□□□□ -0.75
SOX2-OT-201ENST00000460739 ACVR1BP36896 505 aa10.35□□□□□ -0.75
SOX2-OT-201ENST00000460739 ATP4BP51164 291 aa10.35□□□□□ -0.75
SOX2-OT-201ENST00000460739 SLC25A3Q00325 362 aa10.35□□□□□ -0.75
SOX2-OT-201ENST00000460739 EGR4Q05215 589 aa10.35□□□□□ -0.75
SOX2-OT-201ENST00000460739 SPOCK1Q08629 439 aa10.35□□□□□ -0.75
SOX2-OT-201ENST00000460739 PAGE3Q5JUK9 113 aa10.35□□□□□ -0.75
SOX2-OT-201ENST00000460739 C9orf135Q5VTT2 229 aa10.35□□□□□ -0.75
SOX2-OT-201ENST00000460739 AGAP6Q5VW22 663 aa10.35□□□□□ -0.75
SOX2-OT-201ENST00000460739 C11orf71Q6IPW1 123 aa10.35□□□□□ -0.75
SOX2-OT-201ENST00000460739 REEP3Q6NUK4 255 aa10.35□□□□□ -0.75
SOX2-OT-201ENST00000460739 SLC22A25Q6T423 547 aa10.35□□□□□ -0.75
SOX2-OT-201ENST00000460739 C6orf89Q6UWU4 347 aa10.35□□□□□ -0.75
SOX2-OT-201ENST00000460739 CREB3L2Q70SY1 520 aa10.35□□□□□ -0.75
SOX2-OT-201ENST00000460739 C10orf111Q8N326 155 aa10.35□□□□□ -0.75
SOX2-OT-201ENST00000460739 LSMEM1Q8N8F7 131 aa10.35□□□□□ -0.75
SOX2-OT-201ENST00000460739 MFSD8Q8NHS3 518 aa10.35□□□□□ -0.75
SOX2-OT-201ENST00000460739 DHRS9Q9BPW9 319 aa10.35□□□□□ -0.75
SOX2-OT-201ENST00000460739 PTDSS2Q9BVG9 487 aa10.35□□□□□ -0.75
SOX2-OT-201ENST00000460739 C12orf10Q9HB07 376 aa10.35□□□□□ -0.75
SOX2-OT-201ENST00000460739 BARX1Q9HBU1 254 aaPredicted RBP10.35□□□□□ -0.75
SOX2-OT-201ENST00000460739 VAPAQ9P0L0 249 aa10.35□□□□□ -0.75
SOX2-OT-201ENST00000460739 RASD1Q9Y272 281 aa10.35□□□□□ -0.75
SOX2-OT-201ENST00000460739 OR6C65A6NJZ3 312 aa10.34□□□□□ -0.75
SOX2-OT-201ENST00000460739 NR5A2O00482 541 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms