RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 ASGR2P07307 311 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 DACT2Q5SW24 774 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 NCBP2-AS2Q69YL0 99 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 OR1S1Q8NH92 325 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 INTS12Q96CB8 462 aaKnown RBP4.89□□□□□ -1.63
CSMD3-204ENST00000455883 SDSLQ96GA7 329 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 WFIKKN1Q96NZ8 548 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 C1QTNF3Q9BXJ4 246 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 RCCD1A6NED2 376 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 THBS1P07996 1170 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 SLC35E2BP0CK96 405 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 SFT2D3Q587I9 215 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 CLEC12AQ5QGZ9 265 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 FAM129CQ86XR2 697 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 FBXO15Q8NCQ5 510 aaPredicted RBP4.88□□□□□ -1.63
CSMD3-204ENST00000455883 OR9K2Q8NGE7 335 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 OR10K1Q8NGX5 313 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 NAT6Q93015 286 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 ISL2Q96A47 359 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 TRIB1Q96RU8 372 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 EBF4Q9BQW3 602 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 DPCDQ9BVM2 203 aaPredicted RBP4.88□□□□□ -1.63
CSMD3-204ENST00000455883 LHPPQ9H008 270 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 ZNF442Q9H7R0 627 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 RNF181Q9P0P0 153 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 ACOD1A6NK06 481 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 H0YIV9 168 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 F2P00734 622 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 GGT5P36269 586 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 KCNJ3P48549 501 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 ACSM1Q08AH1 577 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 ATPAF1Q5TC12 328 aaPredicted RBP4.88□□□□□ -1.63
CSMD3-204ENST00000455883 ZBTB37Q5TC79 503 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 DTX3Q8N9I9 347 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 ADPRHL1Q8NDY3 354 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 NEURL3Q96EH8 262 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 MRPS24Q96EL2 167 aaKnown RBP4.88□□□□□ -1.63
CSMD3-204ENST00000455883 TIMM29Q9BSF4 260 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 CPEB1Q9BZB8 566 aaKnown RBP4.88□□□□□ -1.63
CSMD3-204ENST00000455883 TXNL4BQ9NX01 149 aaKnown RBP4.88□□□□□ -1.63
CSMD3-204ENST00000455883 OR1A2Q9Y585 309 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 LOC100289279A0A1B0GTE1 492 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 GPR32O75388 356 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 CLN5O75503 358 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 CHRM5P08912 532 aaPredicted RBP4.88□□□□□ -1.63
CSMD3-204ENST00000455883 FXYD6P3P58550 94 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 CHRNEQ04844 493 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 ZNF239Q16600 458 aaKnown RBP4.88□□□□□ -1.63
CSMD3-204ENST00000455883 LGALSLQ3ZCW2 172 aaPredicted RBP4.88□□□□□ -1.63
CSMD3-204ENST00000455883 TRAT1Q6PIZ9 186 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 TMEM220Q6QAJ8 160 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 OVCH1Q7RTY7 1134 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 DDX1Q92499 740 aaKnown RBP4.88□□□□□ -1.63
CSMD3-204ENST00000455883 USB1Q9BQ65 265 aaKnown RBP4.88□□□□□ -1.63
CSMD3-204ENST00000455883 ALOXE3Q9BYJ1 711 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 KCMF1Q9P0J7 381 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 HRH3Q9Y5N1 445 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 ZSWIM8A7E2V4 1837 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 A0A0U1RQJ8 604 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 TMEM238LA0A1B0GVL6 79 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 A6NJY4 79 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 GALTP07902 379 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 FCGR2AP12318 317 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 VEGFAP15692 232 aaPredicted RBP4.88□□□□□ -1.63
CSMD3-204ENST00000455883 ITGB8P26012 769 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 LRRC26Q2I0M4 334 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 CLEC20AQ6ZU45 233 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 TRILQ7L0X0 811 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 MDGA2Q7Z553 956 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 OR4K5Q8NGD3 323 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 OR51G2Q8NGK0 314 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 OR5D16Q8NGK9 328 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 OR1S2Q8NGQ3 325 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 OR4K15Q8NH41 348 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 TFGQ92734 400 aaPredicted RBP4.88□□□□□ -1.63
CSMD3-204ENST00000455883 C10orf35Q96D05 121 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 NOX3Q9HBY0 568 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 RBMX2Q9Y388 322 aaKnown RBP4.88□□□□□ -1.63
CSMD3-204ENST00000455883 ST8SIA3O43173 380 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 KRTDAPP60985 99 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 TMEM198Q66K66 360 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 OR4N5Q8IXE1 308 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 PARP16Q8N5Y8 322 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 C12orf29Q8N999 325 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 OR5AP2Q8NGF4 316 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 OR2D3Q8NGH3 330 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 OR13C8Q8NGS7 320 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 C7orf34Q96L11 122 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 ZNF426Q9BUY5 554 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 RBCK1Q9BYM8 510 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 SIDT1Q9NXL6 827 aaKnown RBP4.88□□□□□ -1.63
CSMD3-204ENST00000455883 KLK14Q9P0G3 267 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 USP3Q9Y6I4 520 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 CD300LBA8K4G0 201 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 TUBG1P23258 451 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 PRDX3P30048 256 aaKnown RBP4.88□□□□□ -1.63
CSMD3-204ENST00000455883 STT3AP46977 705 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 EGR3Q06889 387 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 TSPAN31Q12999 210 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 MS4A13Q5J8X5 152 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms