RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 TMEM8BA6NDV4 472 aa9.88□□□□□ -0.83
SCN9A-205ENST00000454569 A8MVM7 634 aa9.88□□□□□ -0.83
SCN9A-205ENST00000454569 ZNF814B7Z6K7 855 aa9.88□□□□□ -0.83
SCN9A-205ENST00000454569 FTCDNL1E5RQL4 147 aa9.88□□□□□ -0.83
SCN9A-205ENST00000454569 J3QL48 77 aa9.88□□□□□ -0.83
SCN9A-205ENST00000454569 HPRP00739 348 aa9.88□□□□□ -0.83
SCN9A-205ENST00000454569 ADAP00813 363 aa9.88□□□□□ -0.83
SCN9A-205ENST00000454569 GNAO1P09471 354 aa9.88□□□□□ -0.83
SCN9A-205ENST00000454569 ADH6P28332 368 aa9.88□□□□□ -0.83
SCN9A-205ENST00000454569 HTR3AP46098 478 aa9.88□□□□□ -0.83
SCN9A-205ENST00000454569 ALDH6A1Q02252 535 aaKnown RBP9.88□□□□□ -0.83
SCN9A-205ENST00000454569 TSPAN31Q12999 210 aa9.88□□□□□ -0.83
SCN9A-205ENST00000454569 GK3PQ14409 553 aa9.88□□□□□ -0.83
SCN9A-205ENST00000454569 ZNF74Q16587 644 aa9.88□□□□□ -0.83
SCN9A-205ENST00000454569 TMEM176BQ3YBM2 270 aaPredicted RBP9.88□□□□□ -0.83
SCN9A-205ENST00000454569 SYT14P1Q58G82 188 aa9.88□□□□□ -0.83
SCN9A-205ENST00000454569 OR51A7Q8NH64 312 aa9.88□□□□□ -0.83
SCN9A-205ENST00000454569 SMPDL3BQ92485 455 aa9.88□□□□□ -0.83
SCN9A-205ENST00000454569 UBE2FQ969M7 185 aa9.88□□□□□ -0.83
SCN9A-205ENST00000454569 SLC25A36Q96CQ1 311 aa9.88□□□□□ -0.83
SCN9A-205ENST00000454569 SGTBQ96EQ0 304 aa9.88□□□□□ -0.83
SCN9A-205ENST00000454569 CNTNAP3BQ96NU0 1288 aa9.88□□□□□ -0.83
SCN9A-205ENST00000454569 CNTNAP3Q9BZ76 1288 aa9.88□□□□□ -0.83
SCN9A-205ENST00000454569 RIBC2Q9H4K1 309 aa9.88□□□□□ -0.83
SCN9A-205ENST00000454569 MCCC2Q9HCC0 563 aa9.88□□□□□ -0.83
SCN9A-205ENST00000454569 PAPOLBQ9NRJ5 636 aaKnown RBP9.88□□□□□ -0.83
SCN9A-205ENST00000454569 KIF17Q9P2E2 1029 aa9.88□□□□□ -0.83
SCN9A-205ENST00000454569 AASSQ9UDR5 926 aa9.88□□□□□ -0.83
SCN9A-205ENST00000454569 B3GNT3Q9Y2A9 372 aa9.88□□□□□ -0.83
SCN9A-205ENST00000454569 MRPS18CQ9Y3D5 142 aaKnown RBP9.88□□□□□ -0.83
SCN9A-205ENST00000454569 CACNA1BQ00975 2339 aa9.87□□□□□ -0.83
SCN9A-205ENST00000454569 UNC119BA6NIH7 251 aa9.87□□□□□ -0.83
SCN9A-205ENST00000454569 EFCAB9A8MZ26 197 aa9.87□□□□□ -0.83
SCN9A-205ENST00000454569 M0R129 80 aa9.87□□□□□ -0.83
SCN9A-205ENST00000454569 OR7A10O76100 309 aa9.87□□□□□ -0.83
SCN9A-205ENST00000454569 TFPIP10646 304 aa9.87□□□□□ -0.83
SCN9A-205ENST00000454569 ZNF16P17020 682 aaPredicted RBP9.87□□□□□ -0.83
SCN9A-205ENST00000454569 BMP7P18075 431 aa9.87□□□□□ -0.83
SCN9A-205ENST00000454569 CHMP24386 653 aa9.87□□□□□ -0.83
SCN9A-205ENST00000454569 FPR3P25089 353 aa9.87□□□□□ -0.83
SCN9A-205ENST00000454569 EIF1P41567 113 aaKnown RBP9.87□□□□□ -0.83
SCN9A-205ENST00000454569 ADARB1P78563 741 aaKnown RBP9.87□□□□□ -0.83
SCN9A-205ENST00000454569 HSF1Q00613 529 aa9.87□□□□□ -0.83
SCN9A-205ENST00000454569 MYBPHQ13203 477 aa9.87□□□□□ -0.83
SCN9A-205ENST00000454569 C3AR1Q16581 482 aa9.87□□□□□ -0.83
SCN9A-205ENST00000454569 CTU2Q2VPK5 515 aaKnown RBP9.87□□□□□ -0.83
SCN9A-205ENST00000454569 SLC36A3Q495N2 470 aa9.87□□□□□ -0.83
SCN9A-205ENST00000454569 GLYR1Q49A26 553 aaPredicted RBP9.87□□□□□ -0.83
SCN9A-205ENST00000454569 CD300LDQ6UXZ3 194 aa9.87□□□□□ -0.83
SCN9A-205ENST00000454569 GGNQ86UU5 652 aa9.87□□□□□ -0.83
SCN9A-205ENST00000454569 CCDC71Q8IV32 467 aaPredicted RBP9.87□□□□□ -0.83
SCN9A-205ENST00000454569 FAM109AQ8N4B1 249 aa9.87□□□□□ -0.83
SCN9A-205ENST00000454569 IQCF1Q8N6M8 205 aa9.87□□□□□ -0.83
SCN9A-205ENST00000454569 MOSPD2Q8NHP6 518 aa9.87□□□□□ -0.83
SCN9A-205ENST00000454569 STK35Q8TDR2 534 aa9.87□□□□□ -0.83
SCN9A-205ENST00000454569 TM9SF4Q92544 642 aa9.87□□□□□ -0.83
SCN9A-205ENST00000454569 SFXN2Q96NB2 322 aa9.87□□□□□ -0.83
SCN9A-205ENST00000454569 ZFAND3Q9H8U3 227 aa9.87□□□□□ -0.83
SCN9A-205ENST00000454569 ZDHHC11Q9H8X9 412 aa9.87□□□□□ -0.83
SCN9A-205ENST00000454569 FAM118AQ9NWS6 357 aa9.87□□□□□ -0.83
SCN9A-205ENST00000454569 SPRR3Q9UBC9 169 aa9.87□□□□□ -0.83
SCN9A-205ENST00000454569 SIGLEC7Q9Y286 467 aa9.87□□□□□ -0.83
SCN9A-205ENST00000454569 ORC6Q9Y5N6 252 aa9.87□□□□□ -0.83
SCN9A-205ENST00000454569 PHF3Q92576 2039 aaKnown RBP9.87□□□□□ -0.83
SCN9A-205ENST00000454569 ARHGAP21Q5T5U3 1957 aa9.87□□□□□ -0.83
SCN9A-205ENST00000454569 SHANK1Q9Y566 2161 aa9.87□□□□□ -0.83
SCN9A-205ENST00000454569 TRAV36DV7A0A075B6V5 113 aa9.86□□□□□ -0.83
SCN9A-205ENST00000454569 FAM47E-STBD1D6RA91 191 aa9.86□□□□□ -0.83
SCN9A-205ENST00000454569 ZNF208O43345 1280 aa9.86□□□□□ -0.83
SCN9A-205ENST00000454569 DENRO43583 198 aaKnown RBP9.86□□□□□ -0.83
SCN9A-205ENST00000454569 RAMP1O60894 148 aa9.86□□□□□ -0.83
SCN9A-205ENST00000454569 ASAH2BP0C7U1 165 aa9.86□□□□□ -0.83
SCN9A-205ENST00000454569 OSMP13725 252 aa9.86□□□□□ -0.83
SCN9A-205ENST00000454569 POU1F1P28069 291 aa9.86□□□□□ -0.83
SCN9A-205ENST00000454569 GRPRP30550 384 aa9.86□□□□□ -0.83
SCN9A-205ENST00000454569 NPRL3Q12980 569 aa9.86□□□□□ -0.83
SCN9A-205ENST00000454569 SELENBP1Q13228 472 aa9.86□□□□□ -0.83
SCN9A-205ENST00000454569 SLC10A1Q14973 349 aa9.86□□□□□ -0.83
SCN9A-205ENST00000454569 OR7A5Q15622 319 aa9.86□□□□□ -0.83
SCN9A-205ENST00000454569 ACSM5Q6NUN0 579 aa9.86□□□□□ -0.83
SCN9A-205ENST00000454569 C3orf33Q6P1S2 294 aa9.86□□□□□ -0.83
SCN9A-205ENST00000454569 IGFN1Q86VF2 1251 aa9.86□□□□□ -0.83
SCN9A-205ENST00000454569 SLC22A16Q86VW1 577 aa9.86□□□□□ -0.83
SCN9A-205ENST00000454569 SIAH3Q8IW03 269 aa9.86□□□□□ -0.83
SCN9A-205ENST00000454569 WDFY1Q8IWB7 410 aa9.86□□□□□ -0.83
SCN9A-205ENST00000454569 UBQLNLQ8IYU4 475 aa9.86□□□□□ -0.83
SCN9A-205ENST00000454569 KDM8Q8N371 416 aa9.86□□□□□ -0.83
SCN9A-205ENST00000454569 LINC00471Q8N535 108 aa9.86□□□□□ -0.83
SCN9A-205ENST00000454569 C10orf53Q8N6V4 93 aa9.86□□□□□ -0.83
SCN9A-205ENST00000454569 OR4Q3Q8NH05 313 aa9.86□□□□□ -0.83
SCN9A-205ENST00000454569 C9orf43Q8TAL5 461 aaPredicted RBP9.86□□□□□ -0.83
SCN9A-205ENST00000454569 TFAP2CQ92754 450 aa9.86□□□□□ -0.83
SCN9A-205ENST00000454569 SAMD8Q96LT4 415 aa9.86□□□□□ -0.83
SCN9A-205ENST00000454569 CNBD2Q96M20 576 aa9.86□□□□□ -0.83
SCN9A-205ENST00000454569 OR5B2Q96R09 309 aa9.86□□□□□ -0.83
SCN9A-205ENST00000454569 PIGQQ9BRB3 760 aa9.86□□□□□ -0.83
SCN9A-205ENST00000454569 ADI1Q9BV57 179 aa9.86□□□□□ -0.83
SCN9A-205ENST00000454569 SLC19A3Q9BZV2 496 aa9.86□□□□□ -0.83
SCN9A-205ENST00000454569 GRIP2Q9C0E4 1043 aa9.86□□□□□ -0.83
SCN9A-205ENST00000454569 TAS2R5Q9NYW4 299 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms