RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 TMEM233B4DJY2 109 aa12.4□□□□□ -0.42
LYSMD3-202ENST00000453259 CHRNGP07510 517 aa12.4□□□□□ -0.42
LYSMD3-202ENST00000453259 IMPDH2P12268 514 aa12.4□□□□□ -0.42
LYSMD3-202ENST00000453259 NPR2P20594 1047 aa12.4□□□□□ -0.42
LYSMD3-202ENST00000453259 UQCRC2P22695 453 aa12.4□□□□□ -0.42
LYSMD3-202ENST00000453259 ANXA11P50995 505 aaKnown RBP12.4□□□□□ -0.42
LYSMD3-202ENST00000453259 EMX2Q04743 252 aa12.4□□□□□ -0.42
LYSMD3-202ENST00000453259 DPY19L1Q2PZI1 675 aa12.4□□□□□ -0.42
LYSMD3-202ENST00000453259 ANXA8L1Q5VT79 327 aa12.4□□□□□ -0.42
LYSMD3-202ENST00000453259 REP15Q6BDI9 236 aa12.4□□□□□ -0.42
LYSMD3-202ENST00000453259 USP43Q70EL4 1123 aa12.4□□□□□ -0.42
LYSMD3-202ENST00000453259 GLCCI1Q86VQ1 547 aa12.4□□□□□ -0.42
LYSMD3-202ENST00000453259 ZIC4Q8N9L1 334 aa12.4□□□□□ -0.42
LYSMD3-202ENST00000453259 SEMA6DQ8NFY4 1073 aa12.4□□□□□ -0.42
LYSMD3-202ENST00000453259 ZNF418Q8TF45 676 aaPredicted RBP12.4□□□□□ -0.42
LYSMD3-202ENST00000453259 XAGE5Q8WWM1 108 aa12.4□□□□□ -0.42
LYSMD3-202ENST00000453259 TRNT1Q96Q11 434 aaKnown RBP12.4□□□□□ -0.42
LYSMD3-202ENST00000453259 C1orf50Q9BV19 199 aa12.4□□□□□ -0.42
LYSMD3-202ENST00000453259 LINC00470Q9BZP3 86 aa12.4□□□□□ -0.42
LYSMD3-202ENST00000453259 PRSS51A0A1B0GVH4 220 aa12.39□□□□□ -0.43
LYSMD3-202ENST00000453259 AGAP5A6NIR3 686 aa12.39□□□□□ -0.43
LYSMD3-202ENST00000453259 LIPT2A6NK58 231 aa12.39□□□□□ -0.43
LYSMD3-202ENST00000453259 hCG_2039718K7EN88 272 aa12.39□□□□□ -0.43
LYSMD3-202ENST00000453259 KLF11O14901 512 aa12.39□□□□□ -0.43
LYSMD3-202ENST00000453259 CECR9P0C854 216 aa12.39□□□□□ -0.43
LYSMD3-202ENST00000453259 IFNGR1P15260 489 aa12.39□□□□□ -0.43
LYSMD3-202ENST00000453259 CDH2P19022 906 aaPredicted RBP12.39□□□□□ -0.43
LYSMD3-202ENST00000453259 TACR3P29371 465 aa12.39□□□□□ -0.43
LYSMD3-202ENST00000453259 EVX1P49640 407 aa12.39□□□□□ -0.43
LYSMD3-202ENST00000453259 PGS1Q32NB8 556 aa12.39□□□□□ -0.43
LYSMD3-202ENST00000453259 SAXO2Q658L1 398 aa12.39□□□□□ -0.43
LYSMD3-202ENST00000453259 TMEM225Q6GV28 225 aa12.39□□□□□ -0.43
LYSMD3-202ENST00000453259 EIF1ADQ8N9N8 165 aaKnown RBP12.39□□□□□ -0.43
LYSMD3-202ENST00000453259 OR4A15Q8NGL6 344 aa12.39□□□□□ -0.43
LYSMD3-202ENST00000453259 UBASH3BQ8TF42 649 aa12.39□□□□□ -0.43
LYSMD3-202ENST00000453259 BCL2L2Q92843 193 aaPredicted RBP12.39□□□□□ -0.43
LYSMD3-202ENST00000453259 TUBGCP3Q96CW5 907 aa12.39□□□□□ -0.43
LYSMD3-202ENST00000453259 NEURL3Q96EH8 262 aa12.39□□□□□ -0.43
LYSMD3-202ENST00000453259 AURKBQ96GD4 344 aaPredicted RBP12.39□□□□□ -0.43
LYSMD3-202ENST00000453259 ZNF385AQ96PM9 386 aaKnown RBP12.39□□□□□ -0.43
LYSMD3-202ENST00000453259 SNX18Q96RF0 628 aa12.39□□□□□ -0.43
LYSMD3-202ENST00000453259 JMJD8Q96S16 334 aa12.39□□□□□ -0.43
LYSMD3-202ENST00000453259 DOK1Q99704 481 aa12.39□□□□□ -0.43
LYSMD3-202ENST00000453259 TAPBPLQ9BX59 468 aa12.39□□□□□ -0.43
LYSMD3-202ENST00000453259 RASD1Q9Y272 281 aa12.39□□□□□ -0.43
LYSMD3-202ENST00000453259 NUP214P35658 2090 aaPredicted RBP12.39□□□□□ -0.43
LYSMD3-202ENST00000453259 TMEM72A0PK05 275 aa12.38□□□□□ -0.43
LYSMD3-202ENST00000453259 CFAP73A6NFT4 308 aa12.38□□□□□ -0.43
LYSMD3-202ENST00000453259 FAM157AC9JC47 383 aa12.38□□□□□ -0.43
LYSMD3-202ENST00000453259 RPL36A-HNRNPH2H7BZ11 118 aa12.38□□□□□ -0.43
LYSMD3-202ENST00000453259 BCAS1O75363 584 aaPredicted RBP12.38□□□□□ -0.43
LYSMD3-202ENST00000453259 SLU7O95391 586 aaKnown RBP12.38□□□□□ -0.43
LYSMD3-202ENST00000453259 TFP02787 698 aa12.38□□□□□ -0.43
LYSMD3-202ENST00000453259 OR12D1P0DN82 309 aa12.38□□□□□ -0.43
LYSMD3-202ENST00000453259 G6PDP11413 515 aa12.38□□□□□ -0.43
LYSMD3-202ENST00000453259 CBR1P16152 277 aa12.38□□□□□ -0.43
LYSMD3-202ENST00000453259 ARR3P36575 388 aa12.38□□□□□ -0.43
LYSMD3-202ENST00000453259 ACTG1P63261 375 aa12.38□□□□□ -0.43
LYSMD3-202ENST00000453259 PLAURQ03405 335 aa12.38□□□□□ -0.43
LYSMD3-202ENST00000453259 FUT5Q11128 374 aa12.38□□□□□ -0.43
LYSMD3-202ENST00000453259 GPAT4Q86UL3 456 aa12.38□□□□□ -0.43
LYSMD3-202ENST00000453259 CLECL1Q8IZS7 167 aa12.38□□□□□ -0.43
LYSMD3-202ENST00000453259 C3orf56Q8N813 242 aa12.38□□□□□ -0.43
LYSMD3-202ENST00000453259 FAM216AQ8WUB2 273 aa12.38□□□□□ -0.43
LYSMD3-202ENST00000453259 TESCQ96BS2 214 aa12.38□□□□□ -0.43
LYSMD3-202ENST00000453259 APOPT1Q96IL0 206 aa12.38□□□□□ -0.43
LYSMD3-202ENST00000453259 OCEL1Q9H607 264 aa12.38□□□□□ -0.43
LYSMD3-202ENST00000453259 MTHFD2LQ9H903 347 aaPredicted RBP12.38□□□□□ -0.43
LYSMD3-202ENST00000453259 DYNLRB1Q9NP97 96 aa12.38□□□□□ -0.43
LYSMD3-202ENST00000453259 GIMAP2Q9UG22 337 aa12.38□□□□□ -0.43
LYSMD3-202ENST00000453259 RCE1Q9Y256 329 aa12.38□□□□□ -0.43
LYSMD3-202ENST00000453259 GRIP1Q9Y3R0 1128 aa12.38□□□□□ -0.43
LYSMD3-202ENST00000453259 SPEF1Q9Y4P9 236 aa12.38□□□□□ -0.43
LYSMD3-202ENST00000453259 TENM1Q9UKZ4 2725 aa12.38□□□□□ -0.43
LYSMD3-202ENST00000453259 TMEM89A2RUT3 159 aa12.37□□□□□ -0.43
LYSMD3-202ENST00000453259 A8MVM7 634 aa12.37□□□□□ -0.43
LYSMD3-202ENST00000453259 AKR7A3O95154 331 aa12.37□□□□□ -0.43
LYSMD3-202ENST00000453259 LGI1O95970 557 aa12.37□□□□□ -0.43
LYSMD3-202ENST00000453259 DBIP07108 87 aaKnown RBP12.37□□□□□ -0.43
LYSMD3-202ENST00000453259 NUDT17P0C025 328 aa12.37□□□□□ -0.43
LYSMD3-202ENST00000453259 CCNA2P20248 432 aa12.37□□□□□ -0.43
LYSMD3-202ENST00000453259 RPS4Y1P22090 263 aaKnown RBP12.37□□□□□ -0.43
LYSMD3-202ENST00000453259 CXCR1P25024 350 aa12.37□□□□□ -0.43
LYSMD3-202ENST00000453259 IL2RGP31785 369 aa12.37□□□□□ -0.43
LYSMD3-202ENST00000453259 LIMS1P48059 325 aa12.37□□□□□ -0.43
LYSMD3-202ENST00000453259 MRPS11P82912 194 aaKnown RBP12.37□□□□□ -0.43
LYSMD3-202ENST00000453259 EPS8Q12929 822 aa12.37□□□□□ -0.43
LYSMD3-202ENST00000453259 CEACAM7Q14002 265 aa12.37□□□□□ -0.43
LYSMD3-202ENST00000453259 SLC9B1Q4ZJI4 515 aa12.37□□□□□ -0.43
LYSMD3-202ENST00000453259 GPAT3Q53EU6 434 aa12.37□□□□□ -0.43
LYSMD3-202ENST00000453259 OR4F3Q6IEY1 312 aa12.37□□□□□ -0.43
LYSMD3-202ENST00000453259 TNFAIP8L2Q6P589 184 aaPredicted RBP12.37□□□□□ -0.43
LYSMD3-202ENST00000453259 SHQ1Q6PI26 577 aaKnown RBP12.37□□□□□ -0.43
LYSMD3-202ENST00000453259 VHLLQ6RSH7 139 aa12.37□□□□□ -0.43
LYSMD3-202ENST00000453259 CREB3L2Q70SY1 520 aa12.37□□□□□ -0.43
LYSMD3-202ENST00000453259 LRRC34Q8IZ02 419 aa12.37□□□□□ -0.43
LYSMD3-202ENST00000453259 C17orf53Q8N3J3 647 aaPredicted RBP12.37□□□□□ -0.43
LYSMD3-202ENST00000453259 TRIML2Q8N7C3 387 aa12.37□□□□□ -0.43
LYSMD3-202ENST00000453259 TMEM99Q8N816 258 aa12.37□□□□□ -0.43
LYSMD3-202ENST00000453259 CNOT9Q92600 299 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms