RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 WISP2O76076 250 aa3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 UTS2O95399 124 aa3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 IFNA5P01569 189 aa3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 NGFRP08138 427 aa3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 SNRPAP09012 282 aaKnown RBP3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 PRSS56P0CW18 603 aa3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 HSPD1P10809 573 aaKnown RBP3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 HOXB2P14652 356 aa3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 ABOP16442 354 aa3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 MGMTP16455 207 aa3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 POLR2EP19388 210 aaKnown RBP3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 CBLP22681 906 aa3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 DTYMKP23919 212 aa3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 FASP25445 335 aa3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 ARR3P36575 388 aa3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 COILP38432 576 aaPredicted RBP3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 CD79BP40259 229 aa3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 GRIA3P42263 894 aa3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 NSG1P42857 185 aa3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 QARSP47897 775 aaKnown RBP3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 RFX5P48382 616 aaPredicted RBP3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 DNASE1L1P49184 302 aa3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 GLUD2P49448 558 aa3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 NKX2-5P52952 324 aaPredicted RBP3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 MLLT10P55197 1068 aa3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 SEC61BP60468 96 aaKnown RBP3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 ERVK11-1P61568 191 aa3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 RPS15AP62244 130 aaKnown RBP3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 MYL7Q01449 175 aa3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 ID2Q02363 134 aa3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 SRSF1Q07955 248 aaKnown RBP eCLIP3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 ZNHIT3Q15649 155 aaPredicted RBP3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 HLFQ16534 295 aa3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 GUK1Q16774 197 aa3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 SLC36A2Q495M3 483 aa3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 EARS2Q5JPH6 523 aaKnown RBP3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 SLC35D3Q5M8T2 416 aa3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 TPRG1LQ5T0D9 272 aa3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 DCAF12Q5T6F0 453 aa3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 PLPP4Q5VZY2 271 aa3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 OR4C11Q6IEV9 310 aa3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 COX15Q7KZN9 410 aa3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 SSX7Q7RTT5 188 aa3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 ITIH5Q86UX2 942 aa3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 ZNF547Q8IVP9 402 aa3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 GID4Q8IVV7 300 aa3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 DCP1BQ8IZD4 617 aaKnown RBP3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 HS3ST5Q8IZT8 346 aa3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 Q8N402 240 aa3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 SLC44A3Q8N4M1 653 aa3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 TMEM156Q8N614 296 aa3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 NOXO1Q8NFA2 376 aa3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 OR5B17Q8NGF7 314 aa3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 OR56A4Q8NGH8 313 aa3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 OR10V1Q8NGI7 309 aa3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 OR5M9Q8NGP3 310 aa3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 OR6K2Q8NGY2 324 aa3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 OR4Q3Q8NH05 313 aa3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 LYPD6BQ8NI32 183 aa3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 SMAP2Q8WU79 429 aaPredicted RBP3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 BAALCQ8WXS3 180 aa3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 PIK3R3Q92569 461 aa3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 MRPL24Q96A35 216 aaKnown RBP3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 NTAN1Q96AB6 310 aa3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 TMEM143Q96AN5 459 aa3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 EME1Q96AY2 570 aa3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 ITCHQ96J02 903 aa3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 TXNDC15Q96J42 360 aa3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 CDCA3Q99618 268 aaPredicted RBP3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 COPS4Q9BT78 406 aa3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 PORCNQ9H237 461 aa3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 KLHL31Q9H511 634 aa3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 HRASLSQ9HDD0 168 aa3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 CUTCQ9NTM9 273 aa3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 YARS2Q9Y2Z4 477 aaKnown RBP3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 AK6Q9Y3D8 172 aaKnown RBP3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 R4GN57 208 aa3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 ELP1O95163 1332 aa3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 ADGRA3Q8IWK6 1321 aa3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 SMARCA2P51531 1590 aa3.89□□□□□ -1.79
HMGB3P21-201ENST00000452483 GNG14A0A1W2PPG7 69 aa3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 FUOMA2VDF0 154 aa3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 GOLGA6L9A6NEM1 432 aa3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 SLC22A20A6NK97 555 aa3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 PP2D1A8MPX8 630 aa3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 ERVV-1B6SEH8 477 aa3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 TMEM238C9JI98 176 aa3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 LMO7DNF2Z398 122 aa3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 J3KR12 359 aa3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 M0R036 132 aa3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 DCTN6O00399 190 aa3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 SLC16A4O15374 487 aa3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 FGF19O95750 216 aa3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 RHOCP08134 193 aa3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 HOXC6P09630 235 aa3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 COX5BP10606 129 aa3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 NQO1P15559 274 aaKnown RBP3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 XRCC1P18887 633 aaPredicted RBP3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 ZP3P21754 424 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms