RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 SLC24A3Q9HC58 644 aa17.75■□□□□ 0.43
COL9A3-202ENST00000452372 ADA2Q9NZK5 511 aa17.75■□□□□ 0.43
COL9A3-202ENST00000452372 FREM1Q5H8C1 2179 aa17.74■□□□□ 0.43
COL9A3-202ENST00000452372 HRNRQ86YZ3 2850 aaPredicted RBP17.74■□□□□ 0.43
COL9A3-202ENST00000452372 A0A087WUJ7 227 aa17.74■□□□□ 0.43
COL9A3-202ENST00000452372 ZNF724A8MTY0 619 aa17.74■□□□□ 0.43
COL9A3-202ENST00000452372 CDH12P55289 794 aa17.74■□□□□ 0.43
COL9A3-202ENST00000452372 SLC25A3Q00325 362 aa17.74■□□□□ 0.43
COL9A3-202ENST00000452372 ENTPD8Q5MY95 495 aa17.74■□□□□ 0.43
COL9A3-202ENST00000452372 PAQR6Q6TCH4 344 aa17.74■□□□□ 0.43
COL9A3-202ENST00000452372 C5orf46Q6UWT4 87 aa17.74■□□□□ 0.43
COL9A3-202ENST00000452372 SPNS3Q6ZMD2 512 aa17.74■□□□□ 0.43
COL9A3-202ENST00000452372 CARM1Q86X55 608 aa17.74■□□□□ 0.43
COL9A3-202ENST00000452372 TAPBPLQ9BX59 468 aa17.74■□□□□ 0.43
COL9A3-202ENST00000452372 NDE1Q9NXR1 346 aa17.74■□□□□ 0.43
COL9A3-202ENST00000452372 GALNT8Q9NY28 637 aa17.74■□□□□ 0.43
COL9A3-202ENST00000452372 KCNN3Q9UGI6 736 aa17.74■□□□□ 0.43
COL9A3-202ENST00000452372 PRRC2AP48634 2157 aaKnown RBP17.74■□□□□ 0.43
COL9A3-202ENST00000452372 ABCA4P78363 2273 aa17.73■□□□□ 0.43
COL9A3-202ENST00000452372 IGKV3D-15A0A087WSY6 115 aa17.73■□□□□ 0.43
COL9A3-202ENST00000452372 ZNF716A6NP11 495 aa17.73■□□□□ 0.43
COL9A3-202ENST00000452372 ZNF814B7Z6K7 855 aa17.73■□□□□ 0.43
COL9A3-202ENST00000452372 AHSA1O95433 338 aa17.73■□□□□ 0.43
COL9A3-202ENST00000452372 SLC16A1P53985 500 aa17.73■□□□□ 0.43
COL9A3-202ENST00000452372 SORDQ00796 357 aa17.73■□□□□ 0.43
COL9A3-202ENST00000452372 OR7A5Q15622 319 aa17.73■□□□□ 0.43
COL9A3-202ENST00000452372 C16orf89Q6UX73 402 aa17.73■□□□□ 0.43
COL9A3-202ENST00000452372 NUFIP2Q7Z417 695 aaKnown RBP17.73■□□□□ 0.43
COL9A3-202ENST00000452372 CCDC103Q8IW40 242 aa17.73■□□□□ 0.43
COL9A3-202ENST00000452372 MFSD8Q8NHS3 518 aa17.73■□□□□ 0.43
COL9A3-202ENST00000452372 PIGXQ8TBF5 258 aa17.73■□□□□ 0.43
COL9A3-202ENST00000452372 LZICQ8WZA0 190 aa17.73■□□□□ 0.43
COL9A3-202ENST00000452372 ELOVL5Q9NYP7 299 aa17.73■□□□□ 0.43
COL9A3-202ENST00000452372 ZNF469Q96JG9 3925 aaPredicted RBP17.73■□□□□ 0.43
COL9A3-202ENST00000452372 IGKV1D-42A0A075B6H8 117 aa17.72■□□□□ 0.43
COL9A3-202ENST00000452372 CPSF4LA6NMK7 179 aaKnown RBP17.72■□□□□ 0.43
COL9A3-202ENST00000452372 FTCDNL1E5RQL4 147 aa17.72■□□□□ 0.43
COL9A3-202ENST00000452372 GGT1P19440 569 aa17.72■□□□□ 0.43
COL9A3-202ENST00000452372 TNFRSF1BP20333 461 aa17.72■□□□□ 0.43
COL9A3-202ENST00000452372 CPOXP36551 454 aa17.72■□□□□ 0.43
COL9A3-202ENST00000452372 CD79BP40259 229 aa17.72■□□□□ 0.43
COL9A3-202ENST00000452372 LINC00114Q6XXX2 140 aa17.72■□□□□ 0.43
COL9A3-202ENST00000452372 TSPYL5Q86VY4 417 aaPredicted RBP17.72■□□□□ 0.43
COL9A3-202ENST00000452372 TMEM99Q8N816 258 aa17.72■□□□□ 0.43
COL9A3-202ENST00000452372 RNF217Q8TC41 542 aa17.72■□□□□ 0.43
COL9A3-202ENST00000452372 ADAMTS16Q8TE57 1224 aa17.72■□□□□ 0.43
COL9A3-202ENST00000452372 KTI12Q96EK9 354 aaPredicted RBP17.72■□□□□ 0.43
COL9A3-202ENST00000452372 TPD52L3Q96J77 140 aa17.72■□□□□ 0.43
COL9A3-202ENST00000452372 ZNF300Q96RE9 604 aaPredicted RBP17.72■□□□□ 0.43
COL9A3-202ENST00000452372 CDRT15Q96T59 188 aa17.72■□□□□ 0.43
COL9A3-202ENST00000452372 PTDSS2Q9BVG9 487 aa17.72■□□□□ 0.43
COL9A3-202ENST00000452372 ADPRHL2Q9NX46 363 aa17.72■□□□□ 0.43
COL9A3-202ENST00000452372 TRAPPC13A5PLN9 417 aa17.71■□□□□ 0.43
COL9A3-202ENST00000452372 B2RBV5 119 aa17.71■□□□□ 0.43
COL9A3-202ENST00000452372 GPR171O14626 319 aa17.71■□□□□ 0.43
COL9A3-202ENST00000452372 CHP2O43745 196 aa17.71■□□□□ 0.43
COL9A3-202ENST00000452372 OR2T1O43869 369 aa17.71■□□□□ 0.43
COL9A3-202ENST00000452372 RAMP1O60894 148 aa17.71■□□□□ 0.43
COL9A3-202ENST00000452372 AKR7A3O95154 331 aa17.71■□□□□ 0.43
COL9A3-202ENST00000452372 LYPD3O95274 346 aa17.71■□□□□ 0.43
COL9A3-202ENST00000452372 THY1P04216 161 aa17.71■□□□□ 0.43
COL9A3-202ENST00000452372 HSD17B1P14061 328 aa17.71■□□□□ 0.43
COL9A3-202ENST00000452372 KIR2DL3P43628 341 aa17.71■□□□□ 0.43
COL9A3-202ENST00000452372 RPS5P46782 204 aaKnown RBP17.71■□□□□ 0.43
COL9A3-202ENST00000452372 OR1E2P47887 323 aa17.71■□□□□ 0.43
COL9A3-202ENST00000452372 MXRA7P84157 204 aa17.71■□□□□ 0.43
COL9A3-202ENST00000452372 FAM27E3Q08E93 113 aa17.71■□□□□ 0.43
COL9A3-202ENST00000452372 SNTB1Q13884 538 aaKnown RBP17.71■□□□□ 0.43
COL9A3-202ENST00000452372 OTUD3Q5T2D3 398 aaPredicted RBP17.71■□□□□ 0.43
COL9A3-202ENST00000452372 BEND4Q6ZU67 534 aa17.71■□□□□ 0.43
COL9A3-202ENST00000452372 CBLL1Q75N03 491 aa17.71■□□□□ 0.43
COL9A3-202ENST00000452372 GALNT5Q7Z7M9 940 aa17.71■□□□□ 0.43
COL9A3-202ENST00000452372 STK32CQ86UX6 486 aa17.71■□□□□ 0.43
COL9A3-202ENST00000452372 DEFB107AQ8IZN7 70 aa17.71■□□□□ 0.43
COL9A3-202ENST00000452372 RNF148Q8N7C7 305 aa17.71■□□□□ 0.43
COL9A3-202ENST00000452372 NRGNQ92686 78 aa17.71■□□□□ 0.43
COL9A3-202ENST00000452372 TAAR8Q969N4 342 aa17.71■□□□□ 0.43
COL9A3-202ENST00000452372 ZNF775Q96BV0 537 aaPredicted RBP17.71■□□□□ 0.43
COL9A3-202ENST00000452372 TMEM43Q9BTV4 400 aa17.71■□□□□ 0.43
COL9A3-202ENST00000452372 POLR2J2Q9GZM3 115 aaKnown RBP17.71■□□□□ 0.43
COL9A3-202ENST00000452372 POLR2J3Q9H1A7 115 aaKnown RBP17.71■□□□□ 0.43
COL9A3-202ENST00000452372 C12orf49Q9H741 205 aa17.71■□□□□ 0.43
COL9A3-202ENST00000452372 EMC3Q9P0I2 261 aa17.71■□□□□ 0.43
COL9A3-202ENST00000452372 CD300AQ9UGN4 299 aa17.71■□□□□ 0.43
COL9A3-202ENST00000452372 EGFL7Q9UHF1 273 aa17.71■□□□□ 0.43
COL9A3-202ENST00000452372 TRAV36DV7A0A075B6V5 113 aa17.7■□□□□ 0.42
COL9A3-202ENST00000452372 AQP7P3A6NL99 342 aa17.7■□□□□ 0.42
COL9A3-202ENST00000452372 FZD7O75084 574 aa17.7■□□□□ 0.42
COL9A3-202ENST00000452372 T-ENOLP0DO92 83 aa17.7■□□□□ 0.42
COL9A3-202ENST00000452372 CALB2P22676 271 aa17.7■□□□□ 0.42
COL9A3-202ENST00000452372 FXNQ16595 210 aa17.7■□□□□ 0.42
COL9A3-202ENST00000452372 SPATS1Q496A3 300 aa17.7■□□□□ 0.42
COL9A3-202ENST00000452372 SAMD4BQ5PRF9 694 aaKnown RBP17.7■□□□□ 0.42
COL9A3-202ENST00000452372 FAM69AQ5T7M9 428 aa17.7■□□□□ 0.42
COL9A3-202ENST00000452372 GLYATQ6IB77 296 aa17.7■□□□□ 0.42
COL9A3-202ENST00000452372 P3H2Q8IVL5 708 aa17.7■□□□□ 0.42
COL9A3-202ENST00000452372 OR6S1Q8NH40 331 aa17.7■□□□□ 0.42
COL9A3-202ENST00000452372 FAM162AQ96A26 154 aa17.7■□□□□ 0.42
COL9A3-202ENST00000452372 MPP4Q96JB8 637 aa17.7■□□□□ 0.42
COL9A3-202ENST00000452372 EPYCQ99645 322 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms