RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 SLC25A19Q9HC21 320 aa17.35■□□□□ 0.37
RPS28-202ENST00000449223 MCCC2Q9HCC0 563 aa17.35■□□□□ 0.37
RPS28-202ENST00000449223 TP53TG5Q9Y2B4 290 aa17.35■□□□□ 0.37
RPS28-202ENST00000449223 MED12Q93074 2177 aa17.34■□□□□ 0.37
RPS28-202ENST00000449223 LIPT2A6NK58 231 aa17.34■□□□□ 0.37
RPS28-202ENST00000449223 FAM166BA8MTA8 275 aa17.34■□□□□ 0.37
RPS28-202ENST00000449223 H3BN98 237 aa17.34■□□□□ 0.37
RPS28-202ENST00000449223 BCKDKO14874 412 aa17.34■□□□□ 0.37
RPS28-202ENST00000449223 IMPDH2P12268 514 aa17.34■□□□□ 0.37
RPS28-202ENST00000449223 GIPRP48546 466 aa17.34■□□□□ 0.37
RPS28-202ENST00000449223 PRPS1P60891 318 aa17.34■□□□□ 0.37
RPS28-202ENST00000449223 MYBPHQ13203 477 aa17.34■□□□□ 0.37
RPS28-202ENST00000449223 SGCBQ16585 318 aa17.34■□□□□ 0.37
RPS28-202ENST00000449223 SLC6A19Q695T7 634 aa17.34■□□□□ 0.37
RPS28-202ENST00000449223 MAMDC2Q7Z304 686 aaPredicted RBP17.34■□□□□ 0.37
RPS28-202ENST00000449223 LRRC17Q8N6Y2 441 aa17.34■□□□□ 0.37
RPS28-202ENST00000449223 SCAIQ8N9R8 606 aa17.34■□□□□ 0.37
RPS28-202ENST00000449223 OR8D4Q8NGM9 314 aa17.34■□□□□ 0.37
RPS28-202ENST00000449223 TEX47Q8TBZ9 253 aa17.34■□□□□ 0.37
RPS28-202ENST00000449223 FANK1Q8TC84 345 aa17.34■□□□□ 0.37
RPS28-202ENST00000449223 EGLN3Q9H6Z9 239 aa17.34■□□□□ 0.37
RPS28-202ENST00000449223 MRPL39Q9NYK5 338 aaKnown RBP17.34■□□□□ 0.37
RPS28-202ENST00000449223 LRCH1Q9Y2L9 728 aa17.34■□□□□ 0.37
RPS28-202ENST00000449223 HSPE1-MOB4S4R3N1 261 aa17.34■□□□□ 0.37
RPS28-202ENST00000449223 BOD1L1Q8NFC6 3051 aa17.33■□□□□ 0.37
RPS28-202ENST00000449223 TRAV27A0A087WT01 109 aa17.33■□□□□ 0.37
RPS28-202ENST00000449223 PMS2P2O95744 297 aa17.33■□□□□ 0.37
RPS28-202ENST00000449223 IGHG3P01860 377 aa17.33■□□□□ 0.37
RPS28-202ENST00000449223 IGFBP1P08833 259 aaPredicted RBP17.33■□□□□ 0.37
RPS28-202ENST00000449223 CELA3AP09093 270 aa17.33■□□□□ 0.37
RPS28-202ENST00000449223 GNAO1P09471 354 aa17.33■□□□□ 0.37
RPS28-202ENST00000449223 PEPDP12955 493 aa17.33■□□□□ 0.37
RPS28-202ENST00000449223 ZNF24P17028 368 aa17.33■□□□□ 0.37
RPS28-202ENST00000449223 TCEA1P23193 301 aaKnown RBP17.33■□□□□ 0.37
RPS28-202ENST00000449223 MYF6P23409 242 aa17.33■□□□□ 0.37
RPS28-202ENST00000449223 SHC1P29353 583 aa17.33■□□□□ 0.37
RPS28-202ENST00000449223 GGT2P36268 569 aa17.33■□□□□ 0.37
RPS28-202ENST00000449223 SLC10A1Q14973 349 aa17.33■□□□□ 0.37
RPS28-202ENST00000449223 TAF11Q15544 211 aa17.33■□□□□ 0.37
RPS28-202ENST00000449223 ZNF239Q16600 458 aaKnown RBP17.33■□□□□ 0.37
RPS28-202ENST00000449223 ZNF691Q5VV52 312 aa17.33■□□□□ 0.37
RPS28-202ENST00000449223 SLX4IPQ5VYV7 408 aa17.33■□□□□ 0.37
RPS28-202ENST00000449223 SLC27A4Q6P1M0 643 aa17.33■□□□□ 0.37
RPS28-202ENST00000449223 ASB18Q6ZVZ8 466 aa17.33■□□□□ 0.37
RPS28-202ENST00000449223 GGNQ86UU5 652 aa17.33■□□□□ 0.37
RPS28-202ENST00000449223 MARVELD2Q8N4S9 558 aa17.33■□□□□ 0.37
RPS28-202ENST00000449223 ADPRHL1Q8NDY3 354 aa17.33■□□□□ 0.37
RPS28-202ENST00000449223 TNFRSF13CQ96RJ3 184 aa17.33■□□□□ 0.37
RPS28-202ENST00000449223 FANCFQ9NPI8 374 aa17.33■□□□□ 0.37
RPS28-202ENST00000449223 ALKBH4Q9NXW9 302 aa17.33■□□□□ 0.37
RPS28-202ENST00000449223 DNPH1O43598 174 aa17.32■□□□□ 0.36
RPS28-202ENST00000449223 NDUFB2O95178 105 aa17.32■□□□□ 0.36
RPS28-202ENST00000449223 BMP7P18075 431 aa17.32■□□□□ 0.36
RPS28-202ENST00000449223 NUP107P57740 925 aa17.32■□□□□ 0.36
RPS28-202ENST00000449223 BCL2A1Q16548 175 aa17.32■□□□□ 0.36
RPS28-202ENST00000449223 CTU2Q2VPK5 515 aaKnown RBP17.32■□□□□ 0.36
RPS28-202ENST00000449223 TMEM176BQ3YBM2 270 aaPredicted RBP17.32■□□□□ 0.36
RPS28-202ENST00000449223 C12orf73Q69YU5 71 aa17.32■□□□□ 0.36
RPS28-202ENST00000449223 TMPPEQ6ZT21 453 aa17.32■□□□□ 0.36
RPS28-202ENST00000449223 ESPNLQ6ZVH7 1005 aa17.32■□□□□ 0.36
RPS28-202ENST00000449223 OR5J2Q8NH18 312 aa17.32■□□□□ 0.36
RPS28-202ENST00000449223 OR51A7Q8NH64 312 aa17.32■□□□□ 0.36
RPS28-202ENST00000449223 C9orf43Q8TAL5 461 aaPredicted RBP17.32■□□□□ 0.36
RPS28-202ENST00000449223 NEIL3Q8TAT5 605 aa17.32■□□□□ 0.36
RPS28-202ENST00000449223 ADGRG7Q96K78 797 aa17.32■□□□□ 0.36
RPS28-202ENST00000449223 KLHL15Q96M94 604 aa17.32■□□□□ 0.36
RPS28-202ENST00000449223 ZNF570Q96NI8 536 aa17.32■□□□□ 0.36
RPS28-202ENST00000449223 TMEM185BQ9H7F4 350 aa17.32■□□□□ 0.36
RPS28-202ENST00000449223 LHX6Q9UPM6 363 aa17.32■□□□□ 0.36
RPS28-202ENST00000449223 KIAA1549Q9HCM3 1950 aa17.32■□□□□ 0.36
RPS28-202ENST00000449223 ACACBO00763 2458 aa17.32■□□□□ 0.36
RPS28-202ENST00000449223 BHLHE40O14503 412 aa17.31■□□□□ 0.36
RPS28-202ENST00000449223 ACTL6AO96019 429 aa17.31■□□□□ 0.36
RPS28-202ENST00000449223 TFPIP10646 304 aa17.31■□□□□ 0.36
RPS28-202ENST00000449223 GRPRP30550 384 aa17.31■□□□□ 0.36
RPS28-202ENST00000449223 SFTPDP35247 375 aa17.31■□□□□ 0.36
RPS28-202ENST00000449223 LHX2P50458 406 aa17.31■□□□□ 0.36
RPS28-202ENST00000449223 SMSP52788 366 aa17.31■□□□□ 0.36
RPS28-202ENST00000449223 PMP22Q01453 160 aa17.31■□□□□ 0.36
RPS28-202ENST00000449223 MED21Q13503 144 aa17.31■□□□□ 0.36
RPS28-202ENST00000449223 THSD4Q6ZMP0 1018 aa17.31■□□□□ 0.36
RPS28-202ENST00000449223 Q6ZPB1 254 aaPredicted RBP17.31■□□□□ 0.36
RPS28-202ENST00000449223 NANOGNBQ7Z5D8 188 aa17.31■□□□□ 0.36
RPS28-202ENST00000449223 CCDC71Q8IV32 467 aaPredicted RBP17.31■□□□□ 0.36
RPS28-202ENST00000449223 SIAH3Q8IW03 269 aa17.31■□□□□ 0.36
RPS28-202ENST00000449223 C10orf53Q8N6V4 93 aa17.31■□□□□ 0.36
RPS28-202ENST00000449223 LRRC75AQ8NAA5 344 aa17.31■□□□□ 0.36
RPS28-202ENST00000449223 ATP6V1C2Q8NEY4 427 aa17.31■□□□□ 0.36
RPS28-202ENST00000449223 OR2T33Q8NG76 320 aa17.31■□□□□ 0.36
RPS28-202ENST00000449223 OR52L1Q8NGH7 329 aa17.31■□□□□ 0.36
RPS28-202ENST00000449223 PNPLA2Q96AD5 504 aa17.31■□□□□ 0.36
RPS28-202ENST00000449223 SAMD8Q96LT4 415 aa17.31■□□□□ 0.36
RPS28-202ENST00000449223 MUS81Q96NY9 551 aa17.31■□□□□ 0.36
RPS28-202ENST00000449223 OR5B2Q96R09 309 aa17.31■□□□□ 0.36
RPS28-202ENST00000449223 TAPBPLQ9BX59 468 aa17.31■□□□□ 0.36
RPS28-202ENST00000449223 PLSCR2Q9NRY7 297 aa17.31■□□□□ 0.36
RPS28-202ENST00000449223 TBC1D23Q9NUY8 699 aa17.31■□□□□ 0.36
RPS28-202ENST00000449223 GMPPBQ9Y5P6 360 aa17.31■□□□□ 0.36
RPS28-202ENST00000449223 ZNF407Q9C0G0 2248 aa17.31■□□□□ 0.36
RPS28-202ENST00000449223 TFECO14948 347 aaPredicted RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms