RNA–Protein interactions for RNA: ENST00000448905.6

HMGB3-204, Transcript of high mobility group box 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGB3, Length 812 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-204ENST00000448905 ATP6V1G2-DDX39BF2Z307 99 aa11.61□□□□□ -0.55
HMGB3-204ENST00000448905 AP3D1O14617 1153 aa11.61□□□□□ -0.55
HMGB3-204ENST00000448905 BCAS1O75363 584 aaPredicted RBP11.61□□□□□ -0.55
HMGB3-204ENST00000448905 AKR7A3O95154 331 aa11.61□□□□□ -0.55
HMGB3-204ENST00000448905 TGFAP01135 160 aa11.61□□□□□ -0.55
HMGB3-204ENST00000448905 OR7A5Q15622 319 aa11.61□□□□□ -0.55
HMGB3-204ENST00000448905 CHI3L2Q15782 390 aa11.61□□□□□ -0.55
HMGB3-204ENST00000448905 SYPL1Q16563 259 aa11.61□□□□□ -0.55
HMGB3-204ENST00000448905 MST1LQ2TV78 715 aa11.61□□□□□ -0.55
HMGB3-204ENST00000448905 FAM174BQ3ZCQ3 159 aa11.61□□□□□ -0.55
HMGB3-204ENST00000448905 SPANXN4Q5MJ08 99 aa11.61□□□□□ -0.55
HMGB3-204ENST00000448905 FAM120AOSQ5T036 256 aa11.61□□□□□ -0.55
HMGB3-204ENST00000448905 ANKRD16Q6P6B7 361 aa11.61□□□□□ -0.55
HMGB3-204ENST00000448905 SPATA19Q7Z5L4 167 aa11.61□□□□□ -0.55
HMGB3-204ENST00000448905 HMGN2P46Q86SG4 172 aa11.61□□□□□ -0.55
HMGB3-204ENST00000448905 TMEM99Q8N816 258 aa11.61□□□□□ -0.55
HMGB3-204ENST00000448905 ZNF781Q8N8C0 355 aa11.61□□□□□ -0.55
HMGB3-204ENST00000448905 OR4F15Q8NGB8 312 aa11.61□□□□□ -0.55
HMGB3-204ENST00000448905 FOXN4Q96NZ1 517 aa11.61□□□□□ -0.55
HMGB3-204ENST00000448905 SLC38A2Q96QD8 506 aa11.61□□□□□ -0.55
HMGB3-204ENST00000448905 KATNB1Q9BVA0 655 aa11.61□□□□□ -0.55
HMGB3-204ENST00000448905 CALML5Q9NZT1 146 aa11.61□□□□□ -0.55
HMGB3-204ENST00000448905 TMEM247A6NEH6 219 aa11.6□□□□□ -0.55
HMGB3-204ENST00000448905 LIPT2A6NK58 231 aa11.6□□□□□ -0.55
HMGB3-204ENST00000448905 AQP7P3A6NL99 342 aa11.6□□□□□ -0.55
HMGB3-204ENST00000448905 HAX1O00165 279 aa11.6□□□□□ -0.55
HMGB3-204ENST00000448905 ITM2AO43736 263 aa11.6□□□□□ -0.55
HMGB3-204ENST00000448905 TYROBPO43914 113 aa11.6□□□□□ -0.55
HMGB3-204ENST00000448905 ZNF16P17020 682 aaPredicted RBP11.6□□□□□ -0.55
HMGB3-204ENST00000448905 NCF2P19878 526 aaPredicted RBP11.6□□□□□ -0.55
HMGB3-204ENST00000448905 ETV4P43268 484 aa11.6□□□□□ -0.55
HMGB3-204ENST00000448905 SLC1A6P48664 564 aa11.6□□□□□ -0.55
HMGB3-204ENST00000448905 EPS8Q12929 822 aa11.6□□□□□ -0.55
HMGB3-204ENST00000448905 LARS2Q15031 903 aaKnown RBP11.6□□□□□ -0.55
HMGB3-204ENST00000448905 HIKESHIQ53FT3 197 aa11.6□□□□□ -0.55
HMGB3-204ENST00000448905 WBP2NLQ6ICG8 309 aa11.6□□□□□ -0.55
HMGB3-204ENST00000448905 UGT2A3Q6UWM9 527 aa11.6□□□□□ -0.55
HMGB3-204ENST00000448905 CADM2Q8N3J6 435 aa11.6□□□□□ -0.55
HMGB3-204ENST00000448905 ARIH2OSQ8N7S6 290 aa11.6□□□□□ -0.55
HMGB3-204ENST00000448905 ANKFN1Q8N957 763 aa11.6□□□□□ -0.55
HMGB3-204ENST00000448905 ZIC4Q8N9L1 334 aa11.6□□□□□ -0.55
HMGB3-204ENST00000448905 C3orf49Q96BT1 292 aa11.6□□□□□ -0.55
HMGB3-204ENST00000448905 TRIM44Q96DX7 344 aaPredicted RBP11.6□□□□□ -0.55
HMGB3-204ENST00000448905 OR52E6Q96RD3 313 aa11.6□□□□□ -0.55
HMGB3-204ENST00000448905 SLC38A1Q9H2H9 487 aa11.6□□□□□ -0.55
HMGB3-204ENST00000448905 CHODLQ9H9P2 273 aa11.6□□□□□ -0.55
HMGB3-204ENST00000448905 CA10Q9NS85 328 aa11.6□□□□□ -0.55
HMGB3-204ENST00000448905 ADPRHL2Q9NX46 363 aa11.6□□□□□ -0.55
HMGB3-204ENST00000448905 RASD1Q9Y272 281 aa11.6□□□□□ -0.55
HMGB3-204ENST00000448905 A0A096LPI6 279 aa11.59□□□□□ -0.55
HMGB3-204ENST00000448905 IGHV1-18A0A0C4DH31 117 aa11.59□□□□□ -0.55
HMGB3-204ENST00000448905 ZC3H12DA2A288 527 aaKnown RBP11.59□□□□□ -0.55
HMGB3-204ENST00000448905 PRAMEF27A3QJZ7 478 aa11.59□□□□□ -0.55
HMGB3-204ENST00000448905 VWC2LB2RUY7 222 aa11.59□□□□□ -0.55
HMGB3-204ENST00000448905 TM9SF1O15321 606 aa11.59□□□□□ -0.55
HMGB3-204ENST00000448905 PDE5AO76074 875 aa11.59□□□□□ -0.55
HMGB3-204ENST00000448905 LY6HO94772 140 aa11.59□□□□□ -0.55
HMGB3-204ENST00000448905 PGRP06401 933 aa11.59□□□□□ -0.55
HMGB3-204ENST00000448905 C8BP07358 591 aa11.59□□□□□ -0.55
HMGB3-204ENST00000448905 TFPTP0C1Z6 253 aa11.59□□□□□ -0.55
HMGB3-204ENST00000448905 OR4A8P0C604 315 aa11.59□□□□□ -0.55
HMGB3-204ENST00000448905 CREB1P16220 341 aa11.59□□□□□ -0.55
HMGB3-204ENST00000448905 FUT5Q11128 374 aa11.59□□□□□ -0.55
HMGB3-204ENST00000448905 STX3Q13277 289 aa11.59□□□□□ -0.55
HMGB3-204ENST00000448905 C3orf36Q3SXR2 165 aa11.59□□□□□ -0.55
HMGB3-204ENST00000448905 TBRG1Q3YBR2 411 aa11.59□□□□□ -0.55
HMGB3-204ENST00000448905 LIN52Q52LA3 116 aa11.59□□□□□ -0.55
HMGB3-204ENST00000448905 MRPL2Q5T653 305 aaKnown RBP11.59□□□□□ -0.55
HMGB3-204ENST00000448905 CREB3L2Q70SY1 520 aa11.59□□□□□ -0.55
HMGB3-204ENST00000448905 FAM169BQ8N8A8 192 aa11.59□□□□□ -0.55
HMGB3-204ENST00000448905 OR1K1Q8NGR3 316 aa11.59□□□□□ -0.55
HMGB3-204ENST00000448905 OR52P1PQ8NH57 321 aa11.59□□□□□ -0.55
HMGB3-204ENST00000448905 MAGEE2Q8TD90 523 aaPredicted RBP11.59□□□□□ -0.55
HMGB3-204ENST00000448905 MSI2Q96DH6 328 aaKnown RBP11.59□□□□□ -0.55
HMGB3-204ENST00000448905 ANKRD27Q96NW4 1050 aa11.59□□□□□ -0.55
HMGB3-204ENST00000448905 ZNF385AQ96PM9 386 aaKnown RBP11.59□□□□□ -0.55
HMGB3-204ENST00000448905 C19orf24Q9BVV8 132 aa11.59□□□□□ -0.55
HMGB3-204ENST00000448905 NUF2Q9BZD4 464 aa11.59□□□□□ -0.55
HMGB3-204ENST00000448905 THUMPD1Q9NXG2 353 aaKnown RBP11.59□□□□□ -0.55
HMGB3-204ENST00000448905 SONP18583 2426 aaKnown RBP11.59□□□□□ -0.55
HMGB3-204ENST00000448905 CDHR4A6H8M9 788 aa11.58□□□□□ -0.56
HMGB3-204ENST00000448905 RFXANKO14593 260 aa11.58□□□□□ -0.56
HMGB3-204ENST00000448905 RGS16O15492 202 aaPredicted RBP11.58□□□□□ -0.56
HMGB3-204ENST00000448905 LGI1O95970 557 aa11.58□□□□□ -0.56
HMGB3-204ENST00000448905 CHRM4P08173 479 aa11.58□□□□□ -0.56
HMGB3-204ENST00000448905 ZNF23P17027 643 aa11.58□□□□□ -0.56
HMGB3-204ENST00000448905 IDH3GP51553 393 aaPredicted RBP11.58□□□□□ -0.56
HMGB3-204ENST00000448905 CRISP3P54108 245 aa11.58□□□□□ -0.56
HMGB3-204ENST00000448905 SH3BGRP55822 239 aaPredicted RBP11.58□□□□□ -0.56
HMGB3-204ENST00000448905 NME5P56597 212 aa11.58□□□□□ -0.56
HMGB3-204ENST00000448905 SLC25A3Q00325 362 aa11.58□□□□□ -0.56
HMGB3-204ENST00000448905 EFNB3Q15768 340 aa11.58□□□□□ -0.56
HMGB3-204ENST00000448905 KRTAP24-1Q3LI83 254 aa11.58□□□□□ -0.56
HMGB3-204ENST00000448905 NIPAL3Q6P499 406 aa11.58□□□□□ -0.56
HMGB3-204ENST00000448905 VHLLQ6RSH7 139 aa11.58□□□□□ -0.56
HMGB3-204ENST00000448905 CCDC36Q8IYA8 594 aa11.58□□□□□ -0.56
HMGB3-204ENST00000448905 GLB1L3Q8NCI6 653 aaPredicted RBP11.58□□□□□ -0.56
HMGB3-204ENST00000448905 ANKK1Q8NFD2 765 aa11.58□□□□□ -0.56
HMGB3-204ENST00000448905 IL17RDQ8NFM7 739 aa11.58□□□□□ -0.56
HMGB3-204ENST00000448905 NEU4Q8WWR8 484 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms