RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 ZNF250P15622 560 aa17.51■□□□□ 0.39
SDCBP-204ENST00000447182 POLR2CP19387 275 aaPredicted RBP17.51■□□□□ 0.39
SDCBP-204ENST00000447182 SDHBP21912 280 aa17.51■□□□□ 0.39
SDCBP-204ENST00000447182 VEGFCP49767 419 aa17.51■□□□□ 0.39
SDCBP-204ENST00000447182 EMDP50402 254 aa17.51■□□□□ 0.39
SDCBP-204ENST00000447182 MRPS10P82664 201 aaKnown RBP17.51■□□□□ 0.39
SDCBP-204ENST00000447182 OLFML2AQ68BL7 652 aa17.51■□□□□ 0.39
SDCBP-204ENST00000447182 OR51L1Q8NGJ5 315 aa17.51■□□□□ 0.39
SDCBP-204ENST00000447182 DDOQ99489 341 aa17.51■□□□□ 0.39
SDCBP-204ENST00000447182 CCDC86Q9H6F5 360 aaKnown RBP17.51■□□□□ 0.39
SDCBP-204ENST00000447182 POMT2Q9UKY4 750 aa17.51■□□□□ 0.39
SDCBP-204ENST00000447182 COPS3Q9UNS2 423 aa17.51■□□□□ 0.39
SDCBP-204ENST00000447182 ZNF281Q9Y2X9 895 aa17.51■□□□□ 0.39
SDCBP-204ENST00000447182 RWDD3Q9Y3V2 267 aa17.51■□□□□ 0.39
SDCBP-204ENST00000447182 C2orf16Q68DN1 1984 aa17.51■□□□□ 0.39
SDCBP-204ENST00000447182 MCIDASD6RGH6 385 aa17.51■□□□□ 0.39
SDCBP-204ENST00000447182 HOXC4P09017 264 aaPredicted RBP17.51■□□□□ 0.39
SDCBP-204ENST00000447182 C4BPBP20851 252 aa17.51■□□□□ 0.39
SDCBP-204ENST00000447182 AK4P27144 223 aaPredicted RBP17.51■□□□□ 0.39
SDCBP-204ENST00000447182 PPP2CBP62714 309 aa17.51■□□□□ 0.39
SDCBP-204ENST00000447182 PPP2CAP67775 309 aa17.51■□□□□ 0.39
SDCBP-204ENST00000447182 RPL6Q02878 288 aaKnown RBP17.51■□□□□ 0.39
SDCBP-204ENST00000447182 HES5Q5TA89 166 aa17.51■□□□□ 0.39
SDCBP-204ENST00000447182 TANGO2Q6ICL3 276 aa17.51■□□□□ 0.39
SDCBP-204ENST00000447182 ULK3Q6PHR2 472 aa17.51■□□□□ 0.39
SDCBP-204ENST00000447182 TMEFF1Q8IYR6 380 aa17.51■□□□□ 0.39
SDCBP-204ENST00000447182 NPEPL1Q8NDH3 523 aa17.51■□□□□ 0.39
SDCBP-204ENST00000447182 OR2T4Q8NH00 348 aa17.51■□□□□ 0.39
SDCBP-204ENST00000447182 OMA1Q96E52 524 aa17.51■□□□□ 0.39
SDCBP-204ENST00000447182 ZFYVE21Q9BQ24 234 aa17.51■□□□□ 0.39
SDCBP-204ENST00000447182 UTP23Q9BRU9 249 aaKnown RBP17.51■□□□□ 0.39
SDCBP-204ENST00000447182 MRPL15Q9P015 296 aaKnown RBP17.51■□□□□ 0.39
SDCBP-204ENST00000447182 ANKRD20A5PA0PJZ0 165 aa17.5■□□□□ 0.39
SDCBP-204ENST00000447182 C5orf67F2Z3F1 127 aa17.5■□□□□ 0.39
SDCBP-204ENST00000447182 OR7A10O76100 309 aa17.5■□□□□ 0.39
SDCBP-204ENST00000447182 CBX7O95931 251 aa17.5■□□□□ 0.39
SDCBP-204ENST00000447182 APODP05090 189 aa17.5■□□□□ 0.39
SDCBP-204ENST00000447182 PTH2RP49190 550 aa17.5■□□□□ 0.39
SDCBP-204ENST00000447182 ISXQ2M1V0 245 aa17.5■□□□□ 0.39
SDCBP-204ENST00000447182 GLDNQ6ZMI3 551 aaPredicted RBP17.5■□□□□ 0.39
SDCBP-204ENST00000447182 DPY19L2P2Q6ZN68 376 aa17.5■□□□□ 0.39
SDCBP-204ENST00000447182 PRSS41Q7RTY9 318 aa17.5■□□□□ 0.39
SDCBP-204ENST00000447182 ADGRG3Q86Y34 549 aa17.5■□□□□ 0.39
SDCBP-204ENST00000447182 ZNF614Q8N883 585 aa17.5■□□□□ 0.39
SDCBP-204ENST00000447182 FCAMRQ8WWV6 532 aa17.5■□□□□ 0.39
SDCBP-204ENST00000447182 CCDC120Q96HB5 630 aa17.5■□□□□ 0.39
SDCBP-204ENST00000447182 NMNAT2Q9BZQ4 307 aa17.5■□□□□ 0.39
SDCBP-204ENST00000447182 POT1Q9NUX5 634 aa17.5■□□□□ 0.39
SDCBP-204ENST00000447182 C2orf42Q9NWW7 574 aa17.5■□□□□ 0.39
SDCBP-204ENST00000447182 ARPC3O15145 178 aa17.5■□□□□ 0.39
SDCBP-204ENST00000447182 TOXO94900 526 aa17.5■□□□□ 0.39
SDCBP-204ENST00000447182 RAB40ALP0C0E4 278 aa17.5■□□□□ 0.39
SDCBP-204ENST00000447182 PSMB10P40306 273 aa17.5■□□□□ 0.39
SDCBP-204ENST00000447182 MNDAP41218 407 aa17.5■□□□□ 0.39
SDCBP-204ENST00000447182 KIAA1024LP59773 190 aa17.5■□□□□ 0.39
SDCBP-204ENST00000447182 TSPAN5P62079 268 aa17.5■□□□□ 0.39
SDCBP-204ENST00000447182 TCTE1Q5JU00 501 aa17.5■□□□□ 0.39
SDCBP-204ENST00000447182 FCRLAQ7L513 359 aa17.5■□□□□ 0.39
SDCBP-204ENST00000447182 SHISA5Q8N114 240 aa17.5■□□□□ 0.39
SDCBP-204ENST00000447182 ZNRF4Q8WWF5 429 aa17.5■□□□□ 0.39
SDCBP-204ENST00000447182 RAB40AQ8WXH6 277 aa17.5■□□□□ 0.39
SDCBP-204ENST00000447182 OR1E3Q8WZA6 343 aa17.5■□□□□ 0.39
SDCBP-204ENST00000447182 SGTBQ96EQ0 304 aa17.5■□□□□ 0.39
SDCBP-204ENST00000447182 RBCK1Q9BYM8 510 aa17.5■□□□□ 0.39
SDCBP-204ENST00000447182 OR10A4Q9H209 315 aa17.5■□□□□ 0.39
SDCBP-204ENST00000447182 MKKSQ9NPJ1 570 aaPredicted RBP17.5■□□□□ 0.39
SDCBP-204ENST00000447182 EVA1BQ9NVM1 165 aa17.5■□□□□ 0.39
SDCBP-204ENST00000447182 GDE1Q9NZC3 331 aa17.5■□□□□ 0.39
SDCBP-204ENST00000447182 V9GY05 133 aa17.5■□□□□ 0.39
SDCBP-204ENST00000447182 H0YGG7 62 aa17.49■□□□□ 0.39
SDCBP-204ENST00000447182 SLC31A1O15431 190 aa17.49■□□□□ 0.39
SDCBP-204ENST00000447182 SELENOFO60613 162 aa17.49■□□□□ 0.39
SDCBP-204ENST00000447182 IFNGR1P15260 489 aa17.49■□□□□ 0.39
SDCBP-204ENST00000447182 SPI1P17947 270 aa17.49■□□□□ 0.39
SDCBP-204ENST00000447182 MECP2P51608 486 aaKnown RBP17.49■□□□□ 0.39
SDCBP-204ENST00000447182 ADPRHP54922 357 aa17.49■□□□□ 0.39
SDCBP-204ENST00000447182 ARF3P61204 181 aaPredicted RBP17.49■□□□□ 0.39
SDCBP-204ENST00000447182 PSG6Q00889 435 aa17.49■□□□□ 0.39
SDCBP-204ENST00000447182 IL10RAQ13651 578 aa17.49■□□□□ 0.39
SDCBP-204ENST00000447182 PRRT3Q5FWE3 981 aa17.49■□□□□ 0.39
SDCBP-204ENST00000447182 TMEM65Q6PI78 240 aa17.49■□□□□ 0.39
SDCBP-204ENST00000447182 ZNF550Q7Z398 422 aa17.49■□□□□ 0.39
SDCBP-204ENST00000447182 SLC35F3Q8IY50 421 aa17.49■□□□□ 0.39
SDCBP-204ENST00000447182 SIX5Q8N196 739 aa17.49■□□□□ 0.39
SDCBP-204ENST00000447182 RERGQ96A58 199 aaPredicted RBP17.49■□□□□ 0.39
SDCBP-204ENST00000447182 S100A16Q96FQ6 103 aaKnown RBP17.49■□□□□ 0.39
SDCBP-204ENST00000447182 LMF2Q9BU23 707 aaKnown RBP17.49■□□□□ 0.39
SDCBP-204ENST00000447182 LIN7BQ9HAP6 207 aa17.49■□□□□ 0.39
SDCBP-204ENST00000447182 PIPOXQ9P0Z9 390 aa17.49■□□□□ 0.39
SDCBP-204ENST00000447182 KLK11Q9UBX7 282 aa17.49■□□□□ 0.39
SDCBP-204ENST00000447182 KIF25Q9UIL4 384 aa17.49■□□□□ 0.39
SDCBP-204ENST00000447182 FOXJ3Q9UPW0 622 aa17.49■□□□□ 0.39
SDCBP-204ENST00000447182 ADAM18Q9Y3Q7 739 aa17.49■□□□□ 0.39
SDCBP-204ENST00000447182 A0A1W2PPL8 197 aa17.48■□□□□ 0.39
SDCBP-204ENST00000447182 LINC01553A4QN01 128 aa17.48■□□□□ 0.39
SDCBP-204ENST00000447182 GIPP09681 153 aaPredicted RBP17.48■□□□□ 0.39
SDCBP-204ENST00000447182 CALCBP10092 127 aa17.48■□□□□ 0.39
SDCBP-204ENST00000447182 GPR143P51810 404 aa17.48■□□□□ 0.39
SDCBP-204ENST00000447182 OPCMLQ14982 345 aa17.48■□□□□ 0.39
SDCBP-204ENST00000447182 MANEAQ5SRI9 462 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms