RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 OCSTAMPQ9BR26 566 aa7.34□□□□□ -1.24
SMG1-202ENST00000446231 CPNE7Q9UBL6 633 aa7.34□□□□□ -1.24
SMG1-202ENST00000446231 USF3Q68DE3 2245 aa7.34□□□□□ -1.24
SMG1-202ENST00000446231 TMEM212A6NML5 194 aa7.34□□□□□ -1.24
SMG1-202ENST00000446231 GRXCR1A8MXD5 290 aa7.34□□□□□ -1.24
SMG1-202ENST00000446231 SOD1P00441 154 aa7.34□□□□□ -1.24
SMG1-202ENST00000446231 WNT1P04628 370 aa7.34□□□□□ -1.24
SMG1-202ENST00000446231 ZNF280AP59817 542 aaPredicted RBP7.34□□□□□ -1.24
SMG1-202ENST00000446231 CSNK2A1P68400 391 aaPredicted RBP7.34□□□□□ -1.24
SMG1-202ENST00000446231 GAB1Q13480 694 aa7.34□□□□□ -1.24
SMG1-202ENST00000446231 GDF7Q7Z4P5 450 aa7.34□□□□□ -1.24
SMG1-202ENST00000446231 CSNK2A3Q8NEV1 391 aa7.34□□□□□ -1.24
SMG1-202ENST00000446231 DPH7Q9BTV6 452 aa7.34□□□□□ -1.24
SMG1-202ENST00000446231 SLCO5A1Q9H2Y9 848 aa7.34□□□□□ -1.24
SMG1-202ENST00000446231 SRMSQ9H3Y6 488 aa7.34□□□□□ -1.24
SMG1-202ENST00000446231 CBLCQ9ULV8 474 aa7.34□□□□□ -1.24
SMG1-202ENST00000446231 IGKV6D-21A0A0A0MT36 114 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 DCDC2BA2VCK2 349 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 HSBP1L1C9JCN9 74 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 K7ERQ8 282 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 ADH1CP00326 375 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 ZNF28P17035 718 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 BDH1Q02338 343 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 IRF5Q13568 498 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 SLC35F3Q8IY50 421 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 NUP43Q8NFH3 380 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 OR13C5Q8NGS8 318 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 RRAGCQ9HB90 399 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 EPHA6Q9UF33 1036 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 SPP1P10451 314 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 ENTPD8Q5MY95 495 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 KCTD18Q6PI47 426 aaPredicted RBP7.33□□□□□ -1.24
SMG1-202ENST00000446231 Q6ZVL8 140 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 CBLN2Q8IUK8 224 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 C11orf84Q9BUA3 381 aaPredicted RBP7.33□□□□□ -1.24
SMG1-202ENST00000446231 CTSFQ9UBX1 484 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 SOCS6O14544 535 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 B3GALT4O96024 378 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 MFSD13AQ14CX5 517 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 ARSIQ5FYB1 569 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 ZNF704Q6ZNC4 412 aaPredicted RBP7.33□□□□□ -1.24
SMG1-202ENST00000446231 P4HA3Q7Z4N8 544 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 GLRX5Q86SX6 157 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 FAM185AQ8N0U4 392 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 CBARPQ8N350 705 aaPredicted RBP7.33□□□□□ -1.24
SMG1-202ENST00000446231 SPICQ8N5J4 248 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 UBE2J1Q9Y385 318 aaPredicted RBP7.33□□□□□ -1.24
SMG1-202ENST00000446231 ONECUT3O60422 494 aaPredicted RBP7.33□□□□□ -1.24
SMG1-202ENST00000446231 MOGAT2Q3SYC2 334 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 RNLSQ5VYX0 342 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 OR10D4PQ8NGN7 298 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 RBM7Q9Y580 266 aaKnown RBP7.33□□□□□ -1.24
SMG1-202ENST00000446231 HRO43593 1189 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 CLCNKAP51800 687 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 PRICKLE2Q7Z3G6 844 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 GAS2L1Q99501 681 aaPredicted RBP7.33□□□□□ -1.24
SMG1-202ENST00000446231 PELI2Q9HAT8 420 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 TMEM218A2RU14 115 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 OTUD1Q5VV17 481 aaPredicted RBP7.33□□□□□ -1.24
SMG1-202ENST00000446231 FAM111BQ6SJ93 734 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 ESPNLQ6ZVH7 1005 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 SULT1A3P0DMM9 295 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 SULT1A4P0DMN0 295 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 FPR3P25089 353 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 RAB1AP62820 205 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 ETFDHQ16134 617 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 KIAA0355O15063 1070 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 ATP5A1P25705 553 aaKnown RBP7.33□□□□□ -1.24
SMG1-202ENST00000446231 CX3CR1P49238 355 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 MMP15P51511 669 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 AFMIDQ63HM1 303 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 HAVCR2Q8TDQ0 301 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 EXOSC3Q9NQT5 275 aaKnown RBP7.33□□□□□ -1.24
SMG1-202ENST00000446231 CCDC85CA6NKD9 419 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 AP4M1O00189 453 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 B2MP61769 119 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 IL17RCQ8NAC3 791 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 OR4K14Q8NGD5 310 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 WDR89Q96FK6 387 aaPredicted RBP7.33□□□□□ -1.24
SMG1-202ENST00000446231 C19orf12Q9NSK7 152 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 DVL2O14641 736 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 C5orf34Q96MH7 638 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 G6PC3Q9BUM1 346 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 C17orf113A0A1B0GUU1 675 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 FABP9Q0Z7S8 132 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 SBSNQ6UWP8 590 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 CYB5D2Q8WUJ1 264 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 METTL21AQ8WXB1 218 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 FAM3DQ96BQ1 224 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 NIPSNAP3BQ9BS92 247 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 ANTXRLA6NF34 631 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 LIPCP11150 499 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 DCTDP32321 178 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 IDH3GP51553 393 aaPredicted RBP7.33□□□□□ -1.24
SMG1-202ENST00000446231 CAV2P51636 162 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 ACSM1Q08AH1 577 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 OR4C11Q6IEV9 310 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 HEPHL1Q6MZM0 1159 aa7.33□□□□□ -1.24
SMG1-202ENST00000446231 GLDNQ6ZMI3 551 aaPredicted RBP7.33□□□□□ -1.24
SMG1-202ENST00000446231 ABHD13Q7L211 337 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms