RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 P2RY13Q9BPV8 354 aa3.57□□□□□ -1.84
HMGB1P48-201ENST00000446155 ZNF670Q9BS34 389 aa3.57□□□□□ -1.84
HMGB1P48-201ENST00000446155 TRIM15Q9C019 465 aa3.57□□□□□ -1.84
HMGB1P48-201ENST00000446155 IL22Q9GZX6 179 aa3.57□□□□□ -1.84
HMGB1P48-201ENST00000446155 PPDPFQ9H3Y8 114 aa3.57□□□□□ -1.84
HMGB1P48-201ENST00000446155 SMYD3Q9H7B4 428 aa3.57□□□□□ -1.84
HMGB1P48-201ENST00000446155 C8orf33Q9H7E9 229 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P48-201ENST00000446155 NIPAL2Q9H841 368 aa3.57□□□□□ -1.84
HMGB1P48-201ENST00000446155 LYRM4Q9HD34 91 aa3.57□□□□□ -1.84
HMGB1P48-201ENST00000446155 AGPAT3Q9NRZ7 376 aa3.57□□□□□ -1.84
HMGB1P48-201ENST00000446155 ABCC13Q9NSE7 274 aa3.57□□□□□ -1.84
HMGB1P48-201ENST00000446155 CUTCQ9NTM9 273 aa3.57□□□□□ -1.84
HMGB1P48-201ENST00000446155 NUDT15Q9NV35 164 aa3.57□□□□□ -1.84
HMGB1P48-201ENST00000446155 LYARQ9NX58 379 aaKnown RBP3.57□□□□□ -1.84
HMGB1P48-201ENST00000446155 EHFQ9NZC4 300 aa3.57□□□□□ -1.84
HMGB1P48-201ENST00000446155 MTCH1Q9NZJ7 389 aa3.57□□□□□ -1.84
HMGB1P48-201ENST00000446155 FRMPD1Q5SYB0 1578 aa3.56□□□□□ -1.84
HMGB1P48-201ENST00000446155 A0A0J9YYE9 177 aa3.56□□□□□ -1.84
HMGB1P48-201ENST00000446155 IQANK1A0A1B0GTG1 560 aa3.56□□□□□ -1.84
HMGB1P48-201ENST00000446155 TEX48A0A1B0GUV7 120 aa3.56□□□□□ -1.84
HMGB1P48-201ENST00000446155 A0A1W2PPR1 153 aa3.56□□□□□ -1.84
HMGB1P48-201ENST00000446155 TRABD2BA6NFA1 517 aa3.56□□□□□ -1.84
HMGB1P48-201ENST00000446155 A8MXQ7 604 aa3.56□□□□□ -1.84
HMGB1P48-201ENST00000446155 TFECO14948 347 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P48-201ENST00000446155 CHMP2AO43633 222 aa3.56□□□□□ -1.84
HMGB1P48-201ENST00000446155 IDH3BO43837 385 aa3.56□□□□□ -1.84
HMGB1P48-201ENST00000446155 PRKYO43930 277 aa3.56□□□□□ -1.84
HMGB1P48-201ENST00000446155 TGM6O95932 706 aa3.56□□□□□ -1.84
HMGB1P48-201ENST00000446155 TRBC1P01850 177 aa3.56□□□□□ -1.84
HMGB1P48-201ENST00000446155 SNRPCP09234 159 aaKnown RBP3.56□□□□□ -1.84
HMGB1P48-201ENST00000446155 TRIM49P0CI25 452 aa3.56□□□□□ -1.84
HMGB1P48-201ENST00000446155 TRIM49CP0CI26 452 aa3.56□□□□□ -1.84
HMGB1P48-201ENST00000446155 STAG3L2P0CL84 134 aa3.56□□□□□ -1.84
HMGB1P48-201ENST00000446155 RNH1P13489 461 aaKnown RBP3.56□□□□□ -1.84
HMGB1P48-201ENST00000446155 GTF2E2P29084 291 aaKnown RBP3.56□□□□□ -1.84
HMGB1P48-201ENST00000446155 RRM2P31350 389 aa3.56□□□□□ -1.84
HMGB1P48-201ENST00000446155 LONP1P36776 959 aaKnown RBP3.56□□□□□ -1.84
HMGB1P48-201ENST00000446155 XCR1P46094 333 aa3.56□□□□□ -1.84
HMGB1P48-201ENST00000446155 UQCRFS1P47985 274 aa3.56□□□□□ -1.84
HMGB1P48-201ENST00000446155 DAP3P51398 398 aaKnown RBP3.56□□□□□ -1.84
HMGB1P48-201ENST00000446155 PRKXP51817 358 aa3.56□□□□□ -1.84
HMGB1P48-201ENST00000446155 RIPK4P57078 832 aa3.56□□□□□ -1.84
HMGB1P48-201ENST00000446155 KRTAP10-7P60409 375 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P48-201ENST00000446155 YWHAGP61981 247 aaKnown RBP eCLIP3.56□□□□□ -1.84
HMGB1P48-201ENST00000446155 VLDLRP98155 873 aa3.56□□□□□ -1.84
HMGB1P48-201ENST00000446155 FKBP3Q00688 224 aaKnown RBP3.56□□□□□ -1.84
HMGB1P48-201ENST00000446155 ITIH4Q14624 930 aa3.56□□□□□ -1.84
HMGB1P48-201ENST00000446155 KRTAP27-1Q3LI81 207 aa3.56□□□□□ -1.84
HMGB1P48-201ENST00000446155 LIN9Q5TKA1 542 aa3.56□□□□□ -1.84
HMGB1P48-201ENST00000446155 MEDAGQ5VYS4 303 aa3.56□□□□□ -1.84
HMGB1P48-201ENST00000446155 GDPGP1Q6ZNW5 385 aa3.56□□□□□ -1.84
HMGB1P48-201ENST00000446155 LRRC74BQ6ZQY2 392 aa3.56□□□□□ -1.84
HMGB1P48-201ENST00000446155 NIPA1Q7RTP0 329 aa3.56□□□□□ -1.84
HMGB1P48-201ENST00000446155 ERICH1Q86X53 443 aa3.56□□□□□ -1.84
HMGB1P48-201ENST00000446155 ZFAND4Q86XD8 727 aa3.56□□□□□ -1.84
HMGB1P48-201ENST00000446155 METTL4Q8N3J2 472 aa3.56□□□□□ -1.84
HMGB1P48-201ENST00000446155 CSGALNACT2Q8N6G5 542 aa3.56□□□□□ -1.84
HMGB1P48-201ENST00000446155 Q8NBF4 154 aa3.56□□□□□ -1.84
HMGB1P48-201ENST00000446155 B3GNT7Q8NFL0 401 aa3.56□□□□□ -1.84
HMGB1P48-201ENST00000446155 LILRB4Q8NHJ6 448 aa3.56□□□□□ -1.84
HMGB1P48-201ENST00000446155 RHEBL1Q8TAI7 183 aa3.56□□□□□ -1.84
HMGB1P48-201ENST00000446155 MRPS31Q92665 395 aaKnown RBP3.56□□□□□ -1.84
HMGB1P48-201ENST00000446155 KIFAP3Q92845 792 aa3.56□□□□□ -1.84
HMGB1P48-201ENST00000446155 TMIGD2Q96BF3 282 aa3.56□□□□□ -1.84
HMGB1P48-201ENST00000446155 CELF6Q96J87 481 aaKnown RBP3.56□□□□□ -1.84
HMGB1P48-201ENST00000446155 ATP6V1G3Q96LB4 118 aa3.56□□□□□ -1.84
HMGB1P48-201ENST00000446155 ATOH8Q96SQ7 321 aa3.56□□□□□ -1.84
HMGB1P48-201ENST00000446155 RNF2Q99496 336 aa3.56□□□□□ -1.84
HMGB1P48-201ENST00000446155 VGLL1Q99990 258 aa3.56□□□□□ -1.84
HMGB1P48-201ENST00000446155 TRIM51Q9BSJ1 452 aa3.56□□□□□ -1.84
HMGB1P48-201ENST00000446155 NAT10Q9H0A0 1025 aaKnown RBP3.56□□□□□ -1.84
HMGB1P48-201ENST00000446155 FBXO44Q9H4M3 255 aa3.56□□□□□ -1.84
HMGB1P48-201ENST00000446155 CCNB1IP1Q9NPC3 277 aa3.56□□□□□ -1.84
HMGB1P48-201ENST00000446155 EXOSC3Q9NQT5 275 aaKnown RBP3.56□□□□□ -1.84
HMGB1P48-201ENST00000446155 PAK5Q9P286 719 aa3.56□□□□□ -1.84
HMGB1P48-201ENST00000446155 PHF11Q9UIL8 331 aa3.56□□□□□ -1.84
HMGB1P48-201ENST00000446155 NUP50Q9UKX7 468 aa3.56□□□□□ -1.84
HMGB1P48-201ENST00000446155 CPQQ9Y646 472 aa3.56□□□□□ -1.84
HMGB1P48-201ENST00000446155 ALKQ9UM73 1620 aa3.55□□□□□ -1.84
HMGB1P48-201ENST00000446155 MAGI2Q86UL8 1455 aa3.55□□□□□ -1.84
HMGB1P48-201ENST00000446155 SHANK2Q9UPX8 1470 aa3.55□□□□□ -1.84
HMGB1P48-201ENST00000446155 USP6P35125 1406 aa3.55□□□□□ -1.84
HMGB1P48-201ENST00000446155 LOC100506127A0A0U1RQW1 187 aa3.55□□□□□ -1.84
HMGB1P48-201ENST00000446155 TCRBV9S1A1TA0A576 114 aa3.55□□□□□ -1.84
HMGB1P48-201ENST00000446155 VSTM2BA6NLU5 285 aa3.55□□□□□ -1.84
HMGB1P48-201ENST00000446155 LATO43561 262 aa3.55□□□□□ -1.84
HMGB1P48-201ENST00000446155 SNAI1O95863 264 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P48-201ENST00000446155 MBP02144 154 aa3.55□□□□□ -1.84
HMGB1P48-201ENST00000446155 PVRP15151 417 aa3.55□□□□□ -1.84
HMGB1P48-201ENST00000446155 COX5AP20674 150 aa3.55□□□□□ -1.84
HMGB1P48-201ENST00000446155 BCL3P20749 454 aa3.55□□□□□ -1.84
HMGB1P48-201ENST00000446155 PTNP21246 168 aa3.55□□□□□ -1.84
HMGB1P48-201ENST00000446155 PRDX3P30048 256 aaKnown RBP3.55□□□□□ -1.84
HMGB1P48-201ENST00000446155 HMOX2P30519 316 aa3.55□□□□□ -1.84
HMGB1P48-201ENST00000446155 ACVR1BP36896 505 aa3.55□□□□□ -1.84
HMGB1P48-201ENST00000446155 LEPP41159 167 aa3.55□□□□□ -1.84
HMGB1P48-201ENST00000446155 ARHGDIAP52565 204 aa3.55□□□□□ -1.84
HMGB1P48-201ENST00000446155 LIM2P55344 173 aa3.55□□□□□ -1.84
HMGB1P48-201ENST00000446155 RAB10P61026 200 aa3.55□□□□□ -1.84
HMGB1P48-201ENST00000446155 PUDPQ08623 228 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms