RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 IGHV2-70P01814 119 aa6.9□□□□□ -1.31
CPSF6-202ENST00000435070 MGMTP16455 207 aa6.9□□□□□ -1.31
CPSF6-202ENST00000435070 SOX2P48431 317 aa6.9□□□□□ -1.31
CPSF6-202ENST00000435070 GUCA2AQ02747 115 aa6.9□□□□□ -1.31
CPSF6-202ENST00000435070 PRPF38BQ5VTL8 546 aaKnown RBP6.9□□□□□ -1.31
CPSF6-202ENST00000435070 OR51S1Q8NGJ8 323 aa6.9□□□□□ -1.31
CPSF6-202ENST00000435070 OR4C6Q8NH72 309 aa6.9□□□□□ -1.31
CPSF6-202ENST00000435070 TMEM255BQ8WV15 326 aa6.9□□□□□ -1.31
CPSF6-202ENST00000435070 SLC25A38Q96DW6 304 aa6.9□□□□□ -1.31
CPSF6-202ENST00000435070 LIN37Q96GY3 246 aaPredicted RBP6.9□□□□□ -1.31
CPSF6-202ENST00000435070 NRTNQ99748 197 aa6.9□□□□□ -1.31
CPSF6-202ENST00000435070 DPH1Q9BZG8 443 aa6.9□□□□□ -1.31
CPSF6-202ENST00000435070 TGIF2Q9GZN2 237 aa6.9□□□□□ -1.31
CPSF6-202ENST00000435070 UBQLN3Q9H347 655 aa6.9□□□□□ -1.31
CPSF6-202ENST00000435070 KCNIP3Q9Y2W7 256 aa6.9□□□□□ -1.31
CPSF6-202ENST00000435070 LOC285556D6RIA3 1793 aa6.89□□□□□ -1.31
CPSF6-202ENST00000435070 A0A0A6YYC8 382 aaPredicted RBP6.89□□□□□ -1.31
CPSF6-202ENST00000435070 CARNS1A5YM72 827 aa6.89□□□□□ -1.31
CPSF6-202ENST00000435070 I3L1I5 382 aaPredicted RBP6.89□□□□□ -1.31
CPSF6-202ENST00000435070 CCL16O15467 120 aa6.89□□□□□ -1.31
CPSF6-202ENST00000435070 RBMXL2O75526 392 aaKnown RBP6.89□□□□□ -1.31
CPSF6-202ENST00000435070 DAOP14920 347 aa6.89□□□□□ -1.31
CPSF6-202ENST00000435070 IMPA1P29218 277 aa6.89□□□□□ -1.31
CPSF6-202ENST00000435070 P2RX1P51575 399 aa6.89□□□□□ -1.31
CPSF6-202ENST00000435070 MICBQ29980 383 aa6.89□□□□□ -1.31
CPSF6-202ENST00000435070 DHRS7BQ6IAN0 325 aaPredicted RBP6.89□□□□□ -1.31
CPSF6-202ENST00000435070 MAMSTRQ6ZN01 415 aa6.89□□□□□ -1.31
CPSF6-202ENST00000435070 NUDT13Q86X67 352 aa6.89□□□□□ -1.31
CPSF6-202ENST00000435070 OSTF1Q92882 214 aa6.89□□□□□ -1.31
CPSF6-202ENST00000435070 MEGF10Q96KG7 1140 aa6.89□□□□□ -1.31
CPSF6-202ENST00000435070 PRRC1Q96M27 445 aa6.89□□□□□ -1.31
CPSF6-202ENST00000435070 ADAM2Q99965 735 aa6.89□□□□□ -1.31
CPSF6-202ENST00000435070 ZMIZ1Q9ULJ6 1067 aa6.89□□□□□ -1.31
CPSF6-202ENST00000435070 MRPS23Q9Y3D9 190 aaKnown RBP6.89□□□□□ -1.31
CPSF6-202ENST00000435070 DOCK6Q96HP0 2047 aa6.89□□□□□ -1.31
CPSF6-202ENST00000435070 GFYI3L273 518 aa6.89□□□□□ -1.31
CPSF6-202ENST00000435070 AKT2P31751 481 aa6.89□□□□□ -1.31
CPSF6-202ENST00000435070 AQP2P41181 271 aa6.89□□□□□ -1.31
CPSF6-202ENST00000435070 CLDN2P57739 230 aa6.89□□□□□ -1.31
CPSF6-202ENST00000435070 RNF151Q2KHN1 245 aa6.89□□□□□ -1.31
CPSF6-202ENST00000435070 ADAM5Q6NVV9 412 aa6.89□□□□□ -1.31
CPSF6-202ENST00000435070 C3orf33Q6P1S2 294 aa6.89□□□□□ -1.31
CPSF6-202ENST00000435070 ZNF615Q8N8J6 731 aa6.89□□□□□ -1.31
CPSF6-202ENST00000435070 NEURL3Q96EH8 262 aa6.89□□□□□ -1.31
CPSF6-202ENST00000435070 ZNF558Q96NG5 402 aa6.89□□□□□ -1.31
CPSF6-202ENST00000435070 CNTNAP3BQ96NU0 1288 aa6.89□□□□□ -1.31
CPSF6-202ENST00000435070 F2RL3Q96RI0 385 aa6.89□□□□□ -1.31
CPSF6-202ENST00000435070 CLCC1Q96S66 551 aa6.89□□□□□ -1.31
CPSF6-202ENST00000435070 PTPN18Q99952 460 aa6.89□□□□□ -1.31
CPSF6-202ENST00000435070 NOX4Q9NPH5 578 aa6.89□□□□□ -1.31
CPSF6-202ENST00000435070 P2RX2Q9UBL9 471 aa6.89□□□□□ -1.31
CPSF6-202ENST00000435070 MBLAC1A4D2B0 266 aaPredicted RBP6.89□□□□□ -1.31
CPSF6-202ENST00000435070 PNPP00491 289 aa6.89□□□□□ -1.31
CPSF6-202ENST00000435070 CATP04040 527 aaKnown RBP6.89□□□□□ -1.31
CPSF6-202ENST00000435070 PCCBP05166 539 aa6.89□□□□□ -1.31
CPSF6-202ENST00000435070 ZNF3P17036 446 aa6.89□□□□□ -1.31
CPSF6-202ENST00000435070 CDK2P24941 298 aa6.89□□□□□ -1.31
CPSF6-202ENST00000435070 SDHAP31040 664 aa6.89□□□□□ -1.31
CPSF6-202ENST00000435070 TRHRP34981 398 aaPredicted RBP6.89□□□□□ -1.31
CPSF6-202ENST00000435070 POLR2LP62875 67 aaKnown RBP6.89□□□□□ -1.31
CPSF6-202ENST00000435070 POU4F2Q12837 409 aa6.89□□□□□ -1.31
CPSF6-202ENST00000435070 TEAD2Q15562 447 aa6.89□□□□□ -1.31
CPSF6-202ENST00000435070 ZNF805Q5CZA5 627 aa6.89□□□□□ -1.31
CPSF6-202ENST00000435070 SLCO4C1Q6ZQN7 724 aa6.89□□□□□ -1.31
CPSF6-202ENST00000435070 C12orf40Q86WS4 652 aa6.89□□□□□ -1.31
CPSF6-202ENST00000435070 WFDC5Q8TCV5 224 aa6.89□□□□□ -1.31
CPSF6-202ENST00000435070 S100A16Q96FQ6 103 aaKnown RBP6.89□□□□□ -1.31
CPSF6-202ENST00000435070 SLC35G5Q96KT7 338 aa6.89□□□□□ -1.31
CPSF6-202ENST00000435070 IL17FQ96PD4 163 aa6.89□□□□□ -1.31
CPSF6-202ENST00000435070 BRF2Q9HAW0 419 aa6.89□□□□□ -1.31
CPSF6-202ENST00000435070 TRBV5-4A0A0C4DH59 114 aa6.89□□□□□ -1.31
CPSF6-202ENST00000435070 CHRM4P08173 479 aa6.89□□□□□ -1.31
CPSF6-202ENST00000435070 SAGP10523 405 aaPredicted RBP6.89□□□□□ -1.31
CPSF6-202ENST00000435070 ATP1B2P14415 290 aaPredicted RBP6.89□□□□□ -1.31
CPSF6-202ENST00000435070 ABCD3P28288 659 aa6.89□□□□□ -1.31
CPSF6-202ENST00000435070 DLSTP36957 453 aa6.89□□□□□ -1.31
CPSF6-202ENST00000435070 SSX2Q16385 188 aa6.89□□□□□ -1.31
CPSF6-202ENST00000435070 OR4C16Q8NGL9 310 aa6.89□□□□□ -1.31
CPSF6-202ENST00000435070 OR51A7Q8NH64 312 aa6.89□□□□□ -1.31
CPSF6-202ENST00000435070 TMED6Q8WW62 240 aa6.89□□□□□ -1.31
CPSF6-202ENST00000435070 C16orf58Q96GQ5 468 aa6.89□□□□□ -1.31
CPSF6-202ENST00000435070 TRMT61BQ9BVS5 477 aaKnown RBP6.89□□□□□ -1.31
CPSF6-202ENST00000435070 DMRT3Q9NQL9 472 aa6.89□□□□□ -1.31
CPSF6-202ENST00000435070 OR2S2Q9NQN1 319 aa6.89□□□□□ -1.31
CPSF6-202ENST00000435070 EXOGQ9Y2C4 368 aaKnown RBP6.89□□□□□ -1.31
CPSF6-202ENST00000435070 KCNE3Q9Y6H6 103 aa6.89□□□□□ -1.31
CPSF6-202ENST00000435070 TRAV14DV4A0A0A6YYC5 116 aa6.89□□□□□ -1.31
CPSF6-202ENST00000435070 SNRPGP15A8MWD9 76 aa6.89□□□□□ -1.31
CPSF6-202ENST00000435070 C1QTNF3-AMACRE9PGA6 284 aa6.89□□□□□ -1.31
CPSF6-202ENST00000435070 C8orf89P0DMQ9 161 aa6.89□□□□□ -1.31
CPSF6-202ENST00000435070 APEHP13798 732 aaKnown RBP6.89□□□□□ -1.31
CPSF6-202ENST00000435070 GTF2F2P13984 249 aa6.89□□□□□ -1.31
CPSF6-202ENST00000435070 RGS8P57771 180 aaPredicted RBP6.89□□□□□ -1.31
CPSF6-202ENST00000435070 C21orf58P58505 322 aa6.89□□□□□ -1.31
CPSF6-202ENST00000435070 TBPL1P62380 186 aa6.89□□□□□ -1.31
CPSF6-202ENST00000435070 MAPK14Q16539 360 aa6.89□□□□□ -1.31
CPSF6-202ENST00000435070 GFOD2Q3B7J2 385 aa6.89□□□□□ -1.31
CPSF6-202ENST00000435070 ZNF311Q5JNZ3 666 aa6.89□□□□□ -1.31
CPSF6-202ENST00000435070 C20orf24Q9BUV8 137 aa6.89□□□□□ -1.31
CPSF6-202ENST00000435070 WBP1LQ9NX94 342 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms