RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 ZNF619Q8N2I2 560 aa3.89□□□□□ -1.79
HMGB3P5-201ENST00000428894 CCNYL1Q8N7R7 359 aa3.89□□□□□ -1.79
HMGB3P5-201ENST00000428894 CLEC1AQ8NC01 280 aa3.89□□□□□ -1.79
HMGB3P5-201ENST00000428894 CHDHQ8NE62 594 aaPredicted RBP3.89□□□□□ -1.79
HMGB3P5-201ENST00000428894 C17orf47Q8NEP4 570 aa3.89□□□□□ -1.79
HMGB3P5-201ENST00000428894 TTLQ8NG68 377 aa3.89□□□□□ -1.79
HMGB3P5-201ENST00000428894 CFAP61Q8NHU2 1237 aa3.89□□□□□ -1.79
HMGB3P5-201ENST00000428894 P3H4Q92791 437 aa3.89□□□□□ -1.79
HMGB3P5-201ENST00000428894 MR1Q95460 341 aa3.89□□□□□ -1.79
HMGB3P5-201ENST00000428894 SLC35C1Q96A29 364 aa3.89□□□□□ -1.79
HMGB3P5-201ENST00000428894 TUBGCP3Q96CW5 907 aa3.89□□□□□ -1.79
HMGB3P5-201ENST00000428894 ELMO2Q96JJ3 720 aa3.89□□□□□ -1.79
HMGB3P5-201ENST00000428894 TGM7Q96PF1 710 aa3.89□□□□□ -1.79
HMGB3P5-201ENST00000428894 OR2M4Q96R27 311 aa3.89□□□□□ -1.79
HMGB3P5-201ENST00000428894 CPXM1Q96SM3 734 aa3.89□□□□□ -1.79
HMGB3P5-201ENST00000428894 DHRS9Q9BPW9 319 aa3.89□□□□□ -1.79
HMGB3P5-201ENST00000428894 TREX2Q9BQ50 279 aaPredicted RBP3.89□□□□□ -1.79
HMGB3P5-201ENST00000428894 C9orf16Q9BUW7 83 aa3.89□□□□□ -1.79
HMGB3P5-201ENST00000428894 FUT8Q9BYC5 575 aa3.89□□□□□ -1.79
HMGB3P5-201ENST00000428894 NLNQ9BYT8 704 aa3.89□□□□□ -1.79
HMGB3P5-201ENST00000428894 RAB33BQ9H082 229 aa3.89□□□□□ -1.79
HMGB3P5-201ENST00000428894 LIN28AQ9H9Z2 209 aaKnown RBP3.89□□□□□ -1.79
HMGB3P5-201ENST00000428894 FANCEQ9HB96 536 aa3.89□□□□□ -1.79
HMGB3P5-201ENST00000428894 MRM3Q9HC36 420 aaKnown RBP3.89□□□□□ -1.79
HMGB3P5-201ENST00000428894 UBE2TQ9NPD8 197 aaPredicted RBP3.89□□□□□ -1.79
HMGB3P5-201ENST00000428894 RPRD1BQ9NQG5 326 aaKnown RBP3.89□□□□□ -1.79
HMGB3P5-201ENST00000428894 PAQR5Q9NXK6 330 aaPredicted RBP3.89□□□□□ -1.79
HMGB3P5-201ENST00000428894 HEY1Q9Y5J3 304 aa3.89□□□□□ -1.79
HMGB3P5-201ENST00000428894 COMMD3-BMI1R4GMX3 469 aa3.89□□□□□ -1.79
HMGB3P5-201ENST00000428894 ANKRD12Q6UB98 2062 aa3.89□□□□□ -1.79
HMGB3P5-201ENST00000428894 RTTNQ86VV8 2226 aa3.89□□□□□ -1.79
HMGB3P5-201ENST00000428894 CCDC88CQ9P219 2028 aa3.88□□□□□ -1.79
HMGB3P5-201ENST00000428894 OR6C74A6NCV1 312 aa3.88□□□□□ -1.79
HMGB3P5-201ENST00000428894 ACOD1A6NK06 481 aa3.88□□□□□ -1.79
HMGB3P5-201ENST00000428894 PCP4L1A6NKN8 68 aa3.88□□□□□ -1.79
HMGB3P5-201ENST00000428894 SNURFLB1AK76 121 aa3.88□□□□□ -1.79
HMGB3P5-201ENST00000428894 L7N2F9 121 aa3.88□□□□□ -1.79
HMGB3P5-201ENST00000428894 MAGEB3O15480 346 aa3.88□□□□□ -1.79
HMGB3P5-201ENST00000428894 CALCAP01258 141 aa3.88□□□□□ -1.79
HMGB3P5-201ENST00000428894 JCHAINP01591 159 aa3.88□□□□□ -1.79
HMGB3P5-201ENST00000428894 IGHV2-70P01814 119 aa3.88□□□□□ -1.79
HMGB3P5-201ENST00000428894 SNRPAP09012 282 aaKnown RBP3.88□□□□□ -1.79
HMGB3P5-201ENST00000428894 UBTFL6P0CB48 400 aaPredicted RBP3.88□□□□□ -1.79
HMGB3P5-201ENST00000428894 HSMCR30P0CW71 290 aa3.88□□□□□ -1.79
HMGB3P5-201ENST00000428894 ALOX12P18054 663 aa3.88□□□□□ -1.79
HMGB3P5-201ENST00000428894 VCLP18206 1134 aa3.88□□□□□ -1.79
HMGB3P5-201ENST00000428894 CMA1P23946 247 aa3.88□□□□□ -1.79
HMGB3P5-201ENST00000428894 MAPK3P27361 379 aaPredicted RBP3.88□□□□□ -1.79
HMGB3P5-201ENST00000428894 SLC1A1P43005 524 aa3.88□□□□□ -1.79
HMGB3P5-201ENST00000428894 SYKP43405 635 aa3.88□□□□□ -1.79
HMGB3P5-201ENST00000428894 STX17P56962 302 aa3.88□□□□□ -1.79
HMGB3P5-201ENST00000428894 KYNUQ16719 465 aa3.88□□□□□ -1.79
HMGB3P5-201ENST00000428894 PARP15Q460N3 678 aa3.88□□□□□ -1.79
HMGB3P5-201ENST00000428894 TTMPQ5BVD1 217 aa3.88□□□□□ -1.79
HMGB3P5-201ENST00000428894 C6orf163Q5TEZ5 329 aa3.88□□□□□ -1.79
HMGB3P5-201ENST00000428894 RAET1GQ6H3X3 334 aa3.88□□□□□ -1.79
HMGB3P5-201ENST00000428894 FAM199XQ6PEV8 388 aaPredicted RBP3.88□□□□□ -1.79
HMGB3P5-201ENST00000428894 FRRS1Q6ZNA5 592 aa3.88□□□□□ -1.79
HMGB3P5-201ENST00000428894 PRSS42Q7Z5A4 293 aa3.88□□□□□ -1.79
HMGB3P5-201ENST00000428894 FAM131BQ86XD5 332 aa3.88□□□□□ -1.79
HMGB3P5-201ENST00000428894 SLC22A9Q8IVM8 553 aa3.88□□□□□ -1.79
HMGB3P5-201ENST00000428894 MMD2Q8IY49 270 aa3.88□□□□□ -1.79
HMGB3P5-201ENST00000428894 TCAIMQ8N3R3 496 aa3.88□□□□□ -1.79
HMGB3P5-201ENST00000428894 POM121L12Q8N7R1 296 aa3.88□□□□□ -1.79
HMGB3P5-201ENST00000428894 SIDT2Q8NBJ9 832 aaKnown RBP3.88□□□□□ -1.79
HMGB3P5-201ENST00000428894 TMEM35BQ8NCS4 154 aa3.88□□□□□ -1.79
HMGB3P5-201ENST00000428894 ANGPTL6Q8NI99 470 aa3.88□□□□□ -1.79
HMGB3P5-201ENST00000428894 C11orf45Q8TAV5 145 aa3.88□□□□□ -1.79
HMGB3P5-201ENST00000428894 ECHDC3Q96DC8 303 aa3.88□□□□□ -1.79
HMGB3P5-201ENST00000428894 DTD2Q96FN9 168 aa3.88□□□□□ -1.79
HMGB3P5-201ENST00000428894 CHMP6Q96FZ7 201 aa3.88□□□□□ -1.79
HMGB3P5-201ENST00000428894 C17orf62Q9BQA9 187 aa3.88□□□□□ -1.79
HMGB3P5-201ENST00000428894 CENPKQ9BS16 269 aa3.88□□□□□ -1.79
HMGB3P5-201ENST00000428894 TBC1D10AQ9BXI6 508 aa3.88□□□□□ -1.79
HMGB3P5-201ENST00000428894 LRRC19Q9H756 370 aa3.88□□□□□ -1.79
HMGB3P5-201ENST00000428894 MCCC2Q9HCC0 563 aa3.88□□□□□ -1.79
HMGB3P5-201ENST00000428894 SYTL2Q9HCH5 934 aa3.88□□□□□ -1.79
HMGB3P5-201ENST00000428894 B3GAT2Q9NPZ5 323 aa3.88□□□□□ -1.79
HMGB3P5-201ENST00000428894 ERVK-19Q9WJR5 959 aa3.88□□□□□ -1.79
HMGB3P5-201ENST00000428894 SNX10Q9Y5X0 201 aa3.88□□□□□ -1.79
HMGB3P5-201ENST00000428894 DOCK10Q96BY6 2186 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 A0A0J9YVX5 310 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 LOC100653049A0A140TA62 436 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 A0A1B0GVL5 298 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 KRT87PA6NCN2 255 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 A8MX80 341 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 CENPBD1B2RD01 187 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 GPR89AB7ZAQ6 455 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 H0YAE9 185 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 SHOX2O60902 331 aaPredicted RBP3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 NOL3O60936 208 aaKnown RBP3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 SCRG1O75711 98 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 KRT34O76011 436 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 ATP6V1G2O95670 118 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 GNA14O95837 355 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 HPRP00739 348 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 OPN1MWP04001 364 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 CAPN1P07384 714 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 PABPC4LP0CB38 370 aaKnown RBP3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 GPR89BP0CG08 455 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms