RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 COX4I1P13073 169 aa12.05□□□□□ -0.48
SNX3-204ENST00000426155 PSMB1P20618 241 aaKnown RBP12.05□□□□□ -0.48
SNX3-204ENST00000426155 DRD4P21917 467 aa12.05□□□□□ -0.48
SNX3-204ENST00000426155 CBLP22681 906 aa12.05□□□□□ -0.48
SNX3-204ENST00000426155 IGHV1-2P23083 117 aa12.05□□□□□ -0.48
SNX3-204ENST00000426155 LOXP28300 417 aaPredicted RBP12.05□□□□□ -0.48
SNX3-204ENST00000426155 LSP1P33241 339 aa12.05□□□□□ -0.48
SNX3-204ENST00000426155 RPS5P46782 204 aaKnown RBP12.05□□□□□ -0.48
SNX3-204ENST00000426155 P2RY4P51582 365 aa12.05□□□□□ -0.48
SNX3-204ENST00000426155 MAP2K6P52564 334 aa12.05□□□□□ -0.48
SNX3-204ENST00000426155 SLC16A1P53985 500 aa12.05□□□□□ -0.48
SNX3-204ENST00000426155 IST1P53990 364 aa12.05□□□□□ -0.48
SNX3-204ENST00000426155 FOXG1P55316 489 aaPredicted RBP12.05□□□□□ -0.48
SNX3-204ENST00000426155 NCALDP61601 193 aa12.05□□□□□ -0.48
SNX3-204ENST00000426155 PDK3Q15120 406 aa12.05□□□□□ -0.48
SNX3-204ENST00000426155 ALG10BQ5I7T1 473 aa12.05□□□□□ -0.48
SNX3-204ENST00000426155 SFRP5Q5T4F7 317 aa12.05□□□□□ -0.48
SNX3-204ENST00000426155 PAQR6Q6TCH4 344 aa12.05□□□□□ -0.48
SNX3-204ENST00000426155 C6orf89Q6UWU4 347 aa12.05□□□□□ -0.48
SNX3-204ENST00000426155 CASP12Q6UXS9 341 aa12.05□□□□□ -0.48
SNX3-204ENST00000426155 Q6ZT83 130 aa12.05□□□□□ -0.48
SNX3-204ENST00000426155 TSPYL5Q86VY4 417 aaPredicted RBP12.05□□□□□ -0.48
SNX3-204ENST00000426155 WFDC8Q8IUA0 241 aa12.05□□□□□ -0.48
SNX3-204ENST00000426155 ZNF100Q8IYN0 542 aa12.05□□□□□ -0.48
SNX3-204ENST00000426155 LSMEM1Q8N8F7 131 aa12.05□□□□□ -0.48
SNX3-204ENST00000426155 OR6T1Q8NGN1 323 aa12.05□□□□□ -0.48
SNX3-204ENST00000426155 RNF217Q8TC41 542 aa12.05□□□□□ -0.48
SNX3-204ENST00000426155 ZNF583Q96ND8 569 aa12.05□□□□□ -0.48
SNX3-204ENST00000426155 ECSITQ9BQ95 431 aa12.05□□□□□ -0.48
SNX3-204ENST00000426155 NAA11Q9BSU3 229 aaPredicted RBP12.05□□□□□ -0.48
SNX3-204ENST00000426155 CCM2LQ9NUG4 571 aaPredicted RBP12.05□□□□□ -0.48
SNX3-204ENST00000426155 MRGBPQ9NV56 204 aa12.05□□□□□ -0.48
SNX3-204ENST00000426155 ZNF226Q9NYT6 803 aa12.05□□□□□ -0.48
SNX3-204ENST00000426155 EMC3Q9P0I2 261 aa12.05□□□□□ -0.48
SNX3-204ENST00000426155 ST6GALNAC2Q9UJ37 374 aa12.05□□□□□ -0.48
SNX3-204ENST00000426155 SLC13A4Q9UKG4 626 aa12.05□□□□□ -0.48
SNX3-204ENST00000426155 GPR52Q9Y2T5 361 aa12.05□□□□□ -0.48
SNX3-204ENST00000426155 FLVCR1Q9Y5Y0 555 aa12.05□□□□□ -0.48
SNX3-204ENST00000426155 VPS13CQ709C8 3753 aa12.05□□□□□ -0.48
SNX3-204ENST00000426155 A0A0B4J2E0 115 aa12.04□□□□□ -0.48
SNX3-204ENST00000426155 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.04□□□□□ -0.48
SNX3-204ENST00000426155 A0A1B0GX12 115 aa12.04□□□□□ -0.48
SNX3-204ENST00000426155 AQP7P3A6NL99 342 aa12.04□□□□□ -0.48
SNX3-204ENST00000426155 CPSF4LA6NMK7 179 aaKnown RBP12.04□□□□□ -0.48
SNX3-204ENST00000426155 FTCDNL1E5RQL4 147 aa12.04□□□□□ -0.48
SNX3-204ENST00000426155 EIF1BO60739 113 aaKnown RBP12.04□□□□□ -0.48
SNX3-204ENST00000426155 LGI1O95970 557 aa12.04□□□□□ -0.48
SNX3-204ENST00000426155 TNFRSF1BP20333 461 aa12.04□□□□□ -0.48
SNX3-204ENST00000426155 IL32P24001 234 aa12.04□□□□□ -0.48
SNX3-204ENST00000426155 SLC17A1Q14916 467 aa12.04□□□□□ -0.48
SNX3-204ENST00000426155 OR1Q1Q15612 314 aa12.04□□□□□ -0.48
SNX3-204ENST00000426155 NRF1Q16656 503 aa12.04□□□□□ -0.48
SNX3-204ENST00000426155 PAMR1Q6UXH9 720 aa12.04□□□□□ -0.48
SNX3-204ENST00000426155 GPAT4Q86UL3 456 aa12.04□□□□□ -0.48
SNX3-204ENST00000426155 UBE2J2Q8N2K1 259 aa12.04□□□□□ -0.48
SNX3-204ENST00000426155 KDM8Q8N371 416 aa12.04□□□□□ -0.48
SNX3-204ENST00000426155 PCYOX1LQ8NBM8 494 aa12.04□□□□□ -0.48
SNX3-204ENST00000426155 STK35Q8TDR2 534 aa12.04□□□□□ -0.48
SNX3-204ENST00000426155 APH1AQ96BI3 265 aa12.04□□□□□ -0.48
SNX3-204ENST00000426155 SLC25A36Q96CQ1 311 aa12.04□□□□□ -0.48
SNX3-204ENST00000426155 ZNF385AQ96PM9 386 aaKnown RBP12.04□□□□□ -0.48
SNX3-204ENST00000426155 TAPBPLQ9BX59 468 aa12.04□□□□□ -0.48
SNX3-204ENST00000426155 TRIM2Q9C040 744 aa12.04□□□□□ -0.48
SNX3-204ENST00000426155 CMTM6Q9NX76 183 aa12.04□□□□□ -0.48
SNX3-204ENST00000426155 ENO4A6NNW6 628 aa12.03□□□□□ -0.48
SNX3-204ENST00000426155 GPR171O14626 319 aa12.03□□□□□ -0.48
SNX3-204ENST00000426155 AIM2O14862 343 aa12.03□□□□□ -0.48
SNX3-204ENST00000426155 SLC22A2O15244 555 aa12.03□□□□□ -0.48
SNX3-204ENST00000426155 KLF4O43474 513 aa12.03□□□□□ -0.48
SNX3-204ENST00000426155 AHSA1O95433 338 aa12.03□□□□□ -0.48
SNX3-204ENST00000426155 THY1P04216 161 aa12.03□□□□□ -0.48
SNX3-204ENST00000426155 PNMTP11086 282 aa12.03□□□□□ -0.48
SNX3-204ENST00000426155 COX5AP20674 150 aa12.03□□□□□ -0.48
SNX3-204ENST00000426155 CDH12P55289 794 aa12.03□□□□□ -0.48
SNX3-204ENST00000426155 GNGT1P63211 74 aa12.03□□□□□ -0.48
SNX3-204ENST00000426155 ITGADQ13349 1161 aa12.03□□□□□ -0.48
SNX3-204ENST00000426155 TESK1Q15569 626 aa12.03□□□□□ -0.48
SNX3-204ENST00000426155 TAB1Q15750 504 aa12.03□□□□□ -0.48
SNX3-204ENST00000426155 STK11Q15831 433 aa12.03□□□□□ -0.48
SNX3-204ENST00000426155 C9orf135Q5VTT2 229 aa12.03□□□□□ -0.48
SNX3-204ENST00000426155 ULK3Q6PHR2 472 aa12.03□□□□□ -0.48
SNX3-204ENST00000426155 SEZ6L2Q6UXD5 910 aa12.03□□□□□ -0.48
SNX3-204ENST00000426155 BHLHA15Q7RTS1 189 aaPredicted RBP12.03□□□□□ -0.48
SNX3-204ENST00000426155 PATL1Q86TB9 770 aaKnown RBP12.03□□□□□ -0.48
SNX3-204ENST00000426155 RANBP3LQ86VV4 465 aaPredicted RBP12.03□□□□□ -0.48
SNX3-204ENST00000426155 SLC30A8Q8IWU4 369 aa12.03□□□□□ -0.48
SNX3-204ENST00000426155 ZIC4Q8N9L1 334 aa12.03□□□□□ -0.48
SNX3-204ENST00000426155 BHLHE22Q8NFJ8 381 aaPredicted RBP12.03□□□□□ -0.48
SNX3-204ENST00000426155 OR9K2Q8NGE7 335 aa12.03□□□□□ -0.48
SNX3-204ENST00000426155 RP9Q8TA86 221 aaKnown RBP12.03□□□□□ -0.48
SNX3-204ENST00000426155 KISS1RQ969F8 398 aaPredicted RBP12.03□□□□□ -0.48
SNX3-204ENST00000426155 TAAR8Q969N4 342 aa12.03□□□□□ -0.48
SNX3-204ENST00000426155 MCHR1Q99705 422 aa12.03□□□□□ -0.48
SNX3-204ENST00000426155 SH3GL1Q99961 368 aa12.03□□□□□ -0.48
SNX3-204ENST00000426155 MYLK2Q9H1R3 596 aa12.03□□□□□ -0.48
SNX3-204ENST00000426155 FANCFQ9NPI8 374 aa12.03□□□□□ -0.48
SNX3-204ENST00000426155 GID8Q9NWU2 228 aa12.03□□□□□ -0.48
SNX3-204ENST00000426155 PLA2G2EQ9NZK7 142 aa12.03□□□□□ -0.48
SNX3-204ENST00000426155 TEP1Q99973 2627 aaKnown RBP12.03□□□□□ -0.48
SNX3-204ENST00000426155 ZNF469Q96JG9 3925 aaPredicted RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms