RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 CHRNEQ04844 493 aa11.51□□□□□ -0.57
CLCN4-203ENST00000421085 NXNL2Q5VZ03 156 aa11.51□□□□□ -0.57
CLCN4-203ENST00000421085 CRYGNQ8WXF5 182 aa11.51□□□□□ -0.57
CLCN4-203ENST00000421085 SGK3Q96BR1 496 aa11.51□□□□□ -0.57
CLCN4-203ENST00000421085 RSPRY1Q96DX4 576 aa11.51□□□□□ -0.57
CLCN4-203ENST00000421085 HHATLQ9HCP6 504 aa11.51□□□□□ -0.57
CLCN4-203ENST00000421085 OR2T1O43869 369 aa11.51□□□□□ -0.57
CLCN4-203ENST00000421085 TRA2BP62995 288 aaKnown RBP11.51□□□□□ -0.57
CLCN4-203ENST00000421085 ARHGAP19Q14CB8 494 aa11.51□□□□□ -0.57
CLCN4-203ENST00000421085 OR52W1Q6IF63 320 aa11.51□□□□□ -0.57
CLCN4-203ENST00000421085 LIPIQ6XZB0 460 aa11.51□□□□□ -0.57
CLCN4-203ENST00000421085 ZNF480Q8WV37 535 aa11.51□□□□□ -0.57
CLCN4-203ENST00000421085 TMEM40Q8WWA1 233 aa11.51□□□□□ -0.57
CLCN4-203ENST00000421085 APOBEC3BQ9UH17 382 aaKnown RBP11.51□□□□□ -0.57
CLCN4-203ENST00000421085 PCDHGA1Q9Y5H4 931 aa11.51□□□□□ -0.57
CLCN4-203ENST00000421085 MYH13Q9UKX3 1938 aa11.51□□□□□ -0.57
CLCN4-203ENST00000421085 TMEM72A0PK05 275 aa11.51□□□□□ -0.57
CLCN4-203ENST00000421085 TMEM212A6NML5 194 aa11.51□□□□□ -0.57
CLCN4-203ENST00000421085 SULT1C4O75897 302 aa11.51□□□□□ -0.57
CLCN4-203ENST00000421085 KIAA0141Q14154 515 aaPredicted RBP11.51□□□□□ -0.57
CLCN4-203ENST00000421085 MRPL2Q5T653 305 aaKnown RBP11.51□□□□□ -0.57
CLCN4-203ENST00000421085 ADAM5Q6NVV9 412 aa11.51□□□□□ -0.57
CLCN4-203ENST00000421085 Q6ZSR9 355 aa11.51□□□□□ -0.57
CLCN4-203ENST00000421085 USP53Q70EK8 1073 aa11.51□□□□□ -0.57
CLCN4-203ENST00000421085 OR6T1Q8NGN1 323 aa11.51□□□□□ -0.57
CLCN4-203ENST00000421085 CPNE4Q96A23 557 aaPredicted RBP11.51□□□□□ -0.57
CLCN4-203ENST00000421085 C10orf90Q96M02 699 aa11.51□□□□□ -0.57
CLCN4-203ENST00000421085 CTRCQ99895 268 aa11.51□□□□□ -0.57
CLCN4-203ENST00000421085 LIN7BQ9HAP6 207 aa11.51□□□□□ -0.57
CLCN4-203ENST00000421085 OR2T7P0C7T2 308 aa11.5□□□□□ -0.57
CLCN4-203ENST00000421085 ELAVL4P26378 380 aaKnown RBP11.5□□□□□ -0.57
CLCN4-203ENST00000421085 SERTAD2Q14140 314 aa11.5□□□□□ -0.57
CLCN4-203ENST00000421085 BAK1Q16611 211 aa11.5□□□□□ -0.57
CLCN4-203ENST00000421085 MPEG1Q2M385 716 aa11.5□□□□□ -0.57
CLCN4-203ENST00000421085 OR9A4Q8NGU2 314 aa11.5□□□□□ -0.57
CLCN4-203ENST00000421085 OR2T27Q8NH04 317 aa11.5□□□□□ -0.57
CLCN4-203ENST00000421085 CHTF18Q8WVB6 975 aa11.5□□□□□ -0.57
CLCN4-203ENST00000421085 SLC25A46Q96AG3 418 aa11.5□□□□□ -0.57
CLCN4-203ENST00000421085 CMSS1Q9BQ75 279 aaKnown RBP11.5□□□□□ -0.57
CLCN4-203ENST00000421085 SLC17A9Q9BYT1 436 aa11.5□□□□□ -0.57
CLCN4-203ENST00000421085 OR52A5Q9H2C5 316 aa11.5□□□□□ -0.57
CLCN4-203ENST00000421085 PIK3C2AO00443 1686 aa11.5□□□□□ -0.57
CLCN4-203ENST00000421085 DRGXA6NNA5 263 aa11.5□□□□□ -0.57
CLCN4-203ENST00000421085 C1orf105O95561 183 aa11.5□□□□□ -0.57
CLCN4-203ENST00000421085 HBE1P02100 147 aa11.5□□□□□ -0.57
CLCN4-203ENST00000421085 IRF2P14316 349 aa11.5□□□□□ -0.57
CLCN4-203ENST00000421085 CTSCP53634 463 aa11.5□□□□□ -0.57
CLCN4-203ENST00000421085 GPR176Q14439 515 aa11.5□□□□□ -0.57
CLCN4-203ENST00000421085 ZNF425Q6IV72 752 aa11.5□□□□□ -0.57
CLCN4-203ENST00000421085 LINC00299Q6ZSB3 139 aa11.5□□□□□ -0.57
CLCN4-203ENST00000421085 NLRC3Q7RTR2 1065 aa11.5□□□□□ -0.57
CLCN4-203ENST00000421085 NIPSNAP3BQ9BS92 247 aa11.5□□□□□ -0.57
CLCN4-203ENST00000421085 POFUT1Q9H488 388 aa11.5□□□□□ -0.57
CLCN4-203ENST00000421085 URGCP-MRPS24S4R325 110 aa11.5□□□□□ -0.57
CLCN4-203ENST00000421085 IMPA2O14732 288 aa11.5□□□□□ -0.57
CLCN4-203ENST00000421085 NSA2O95478 260 aaKnown RBP11.5□□□□□ -0.57
CLCN4-203ENST00000421085 ADRB1P08588 477 aa11.5□□□□□ -0.57
CLCN4-203ENST00000421085 ATXN1LP0C7T5 689 aaKnown RBP11.5□□□□□ -0.57
CLCN4-203ENST00000421085 HTR1FP30939 366 aa11.5□□□□□ -0.57
CLCN4-203ENST00000421085 BDH1Q02338 343 aa11.5□□□□□ -0.57
CLCN4-203ENST00000421085 ZBTB44Q8NCP5 570 aa11.5□□□□□ -0.57
CLCN4-203ENST00000421085 OR14L1PQ8NHC6 308 aa11.5□□□□□ -0.57
CLCN4-203ENST00000421085 C22orf15Q8WYQ4 148 aa11.5□□□□□ -0.57
CLCN4-203ENST00000421085 SLC39A13Q96H72 371 aa11.5□□□□□ -0.57
CLCN4-203ENST00000421085 PIGMQ9H3S5 423 aa11.5□□□□□ -0.57
CLCN4-203ENST00000421085 PCDHGA5Q9Y5G8 931 aa11.5□□□□□ -0.57
CLCN4-203ENST00000421085 MED1Q15648 1581 aaPredicted RBP11.5□□□□□ -0.57
CLCN4-203ENST00000421085 ATP1B1P05026 303 aa11.5□□□□□ -0.57
CLCN4-203ENST00000421085 CD53P19397 219 aa11.5□□□□□ -0.57
CLCN4-203ENST00000421085 TRIM23P36406 574 aa11.5□□□□□ -0.57
CLCN4-203ENST00000421085 UBE2NP61088 152 aaKnown RBP11.5□□□□□ -0.57
CLCN4-203ENST00000421085 ISL1P61371 349 aa11.5□□□□□ -0.57
CLCN4-203ENST00000421085 AKR1C1Q04828 323 aa11.5□□□□□ -0.57
CLCN4-203ENST00000421085 COX20Q5RI15 118 aa11.5□□□□□ -0.57
CLCN4-203ENST00000421085 PLCXD3Q63HM9 321 aa11.5□□□□□ -0.57
CLCN4-203ENST00000421085 ARRDC2Q8TBH0 407 aa11.5□□□□□ -0.57
CLCN4-203ENST00000421085 RAB39BQ96DA2 213 aa11.5□□□□□ -0.57
CLCN4-203ENST00000421085 SLC41A2Q96JW4 573 aa11.5□□□□□ -0.57
CLCN4-203ENST00000421085 ELF4Q99607 663 aaPredicted RBP11.5□□□□□ -0.57
CLCN4-203ENST00000421085 SAGE1Q9NXZ1 904 aa11.5□□□□□ -0.57
CLCN4-203ENST00000421085 SLC22A7Q9Y694 548 aa11.5□□□□□ -0.57
CLCN4-203ENST00000421085 GFRA2O00451 464 aa11.5□□□□□ -0.57
CLCN4-203ENST00000421085 SCO1O75880 301 aa11.5□□□□□ -0.57
CLCN4-203ENST00000421085 PMS2P2O95744 297 aa11.5□□□□□ -0.57
CLCN4-203ENST00000421085 OR13C7P0DN81 318 aa11.5□□□□□ -0.57
CLCN4-203ENST00000421085 CCR9P51686 369 aa11.5□□□□□ -0.57
CLCN4-203ENST00000421085 ASAH1Q13510 395 aa11.5□□□□□ -0.57
CLCN4-203ENST00000421085 SMAD2Q15796 467 aaKnown RBP11.5□□□□□ -0.57
CLCN4-203ENST00000421085 CTU2Q2VPK5 515 aaKnown RBP11.5□□□□□ -0.57
CLCN4-203ENST00000421085 AARDQ4LEZ3 155 aa11.5□□□□□ -0.57
CLCN4-203ENST00000421085 WBP2NLQ6ICG8 309 aa11.5□□□□□ -0.57
CLCN4-203ENST00000421085 RBMS3Q6XE24 437 aaKnown RBP11.5□□□□□ -0.57
CLCN4-203ENST00000421085 C17orf107Q6ZR85 190 aa11.5□□□□□ -0.57
CLCN4-203ENST00000421085 SLC35D2Q76EJ3 337 aa11.5□□□□□ -0.57
CLCN4-203ENST00000421085 TMEM106AQ96A25 262 aa11.5□□□□□ -0.57
CLCN4-203ENST00000421085 RAB3CQ96E17 227 aa11.5□□□□□ -0.57
CLCN4-203ENST00000421085 TEX37Q96LM6 180 aa11.5□□□□□ -0.57
CLCN4-203ENST00000421085 CHRDQ9H2X0 955 aa11.5□□□□□ -0.57
CLCN4-203ENST00000421085 SLC6A20Q9NP91 592 aa11.5□□□□□ -0.57
CLCN4-203ENST00000421085 ZNF593O00488 134 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms