RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 ALG2Q9H553 416 aa8.3□□□□□ -1.08
NUP50-205ENST00000419387 SLC52A3Q9NQ40 469 aa8.3□□□□□ -1.08
NUP50-205ENST00000419387 FAIMQ9NVQ4 179 aa8.3□□□□□ -1.08
NUP50-205ENST00000419387 TAS2R16Q9NYV7 291 aa8.3□□□□□ -1.08
NUP50-205ENST00000419387 UPB1Q9UBR1 384 aa8.3□□□□□ -1.08
NUP50-205ENST00000419387 DCTN4Q9UJW0 460 aa8.3□□□□□ -1.08
NUP50-205ENST00000419387 ZNF232Q9UNY5 417 aa8.3□□□□□ -1.08
NUP50-205ENST00000419387 SLC9A8Q9Y2E8 581 aa8.3□□□□□ -1.08
NUP50-205ENST00000419387 SLC25A15Q9Y619 301 aa8.3□□□□□ -1.08
NUP50-205ENST00000419387 DSPPQ9NZW4 1301 aa8.29□□□□□ -1.08
NUP50-205ENST00000419387 A0A1W2PR80 420 aa8.29□□□□□ -1.08
NUP50-205ENST00000419387 FAM234BA2RU67 622 aa8.29□□□□□ -1.08
NUP50-205ENST00000419387 TMEM247A6NEH6 219 aa8.29□□□□□ -1.08
NUP50-205ENST00000419387 LIPT2A6NK58 231 aa8.29□□□□□ -1.08
NUP50-205ENST00000419387 GPIP06744 558 aa8.29□□□□□ -1.08
NUP50-205ENST00000419387 CD40P25942 277 aa8.29□□□□□ -1.08
NUP50-205ENST00000419387 PCSK6P29122 969 aa8.29□□□□□ -1.08
NUP50-205ENST00000419387 MRPL19P49406 292 aaKnown RBP8.29□□□□□ -1.08
NUP50-205ENST00000419387 ZNF83P51522 516 aa8.29□□□□□ -1.08
NUP50-205ENST00000419387 COPZ1P61923 177 aa8.29□□□□□ -1.08
NUP50-205ENST00000419387 PPP2R2BQ00005 443 aa8.29□□□□□ -1.08
NUP50-205ENST00000419387 VEZF1Q14119 521 aa8.29□□□□□ -1.08
NUP50-205ENST00000419387 LARS2Q15031 903 aaKnown RBP8.29□□□□□ -1.08
NUP50-205ENST00000419387 OR7A5Q15622 319 aa8.29□□□□□ -1.08
NUP50-205ENST00000419387 GTDC1Q4AE62 458 aa8.29□□□□□ -1.08
NUP50-205ENST00000419387 HSP90B2PQ58FF3 399 aa8.29□□□□□ -1.08
NUP50-205ENST00000419387 C6orf10Q5SRN2 563 aa8.29□□□□□ -1.08
NUP50-205ENST00000419387 OTUD3Q5T2D3 398 aaPredicted RBP8.29□□□□□ -1.08
NUP50-205ENST00000419387 TSPO2Q5TGU0 170 aa8.29□□□□□ -1.08
NUP50-205ENST00000419387 RNF220Q5VTB9 566 aa8.29□□□□□ -1.08
NUP50-205ENST00000419387 AGAP6Q5VW22 663 aa8.29□□□□□ -1.08
NUP50-205ENST00000419387 SLC22A25Q6T423 547 aa8.29□□□□□ -1.08
NUP50-205ENST00000419387 LSRQ86X29 649 aaPredicted RBP8.29□□□□□ -1.08
NUP50-205ENST00000419387 FUNDC1Q8IVP5 155 aa8.29□□□□□ -1.08
NUP50-205ENST00000419387 DEPDC4Q8N2C3 294 aa8.29□□□□□ -1.08
NUP50-205ENST00000419387 MIER2Q8N344 545 aa8.29□□□□□ -1.08
NUP50-205ENST00000419387 CLIP4Q8N3C7 705 aa8.29□□□□□ -1.08
NUP50-205ENST00000419387 CADM2Q8N3J6 435 aa8.29□□□□□ -1.08
NUP50-205ENST00000419387 TMEM99Q8N816 258 aa8.29□□□□□ -1.08
NUP50-205ENST00000419387 OR9I1Q8NGQ6 314 aa8.29□□□□□ -1.08
NUP50-205ENST00000419387 DYDC1Q8WWB3 177 aa8.29□□□□□ -1.08
NUP50-205ENST00000419387 STON2Q8WXE9 905 aa8.29□□□□□ -1.08
NUP50-205ENST00000419387 GTF2H4Q92759 462 aa8.29□□□□□ -1.08
NUP50-205ENST00000419387 VPS33AQ96AX1 596 aa8.29□□□□□ -1.08
NUP50-205ENST00000419387 TMEM45BQ96B21 275 aa8.29□□□□□ -1.08
NUP50-205ENST00000419387 THOC1Q96FV9 657 aaKnown RBP8.29□□□□□ -1.08
NUP50-205ENST00000419387 AURKBQ96GD4 344 aaPredicted RBP8.29□□□□□ -1.08
NUP50-205ENST00000419387 TMEM19Q96HH6 336 aa8.29□□□□□ -1.08
NUP50-205ENST00000419387 SF3B5Q9BWJ5 86 aaKnown RBP8.29□□□□□ -1.08
NUP50-205ENST00000419387 SPATA9Q9BWV2 254 aa8.29□□□□□ -1.08
NUP50-205ENST00000419387 TAPBPLQ9BX59 468 aa8.29□□□□□ -1.08
NUP50-205ENST00000419387 REG4Q9BYZ8 158 aa8.29□□□□□ -1.08
NUP50-205ENST00000419387 AMBRA1Q9C0C7 1298 aa8.29□□□□□ -1.08
NUP50-205ENST00000419387 SLCO5A1Q9H2Y9 848 aa8.29□□□□□ -1.08
NUP50-205ENST00000419387 PIF1Q9H611 641 aa8.29□□□□□ -1.08
NUP50-205ENST00000419387 ZNF385DQ9H6B1 395 aa8.29□□□□□ -1.08
NUP50-205ENST00000419387 ARMC7Q9H6L4 198 aa8.29□□□□□ -1.08
NUP50-205ENST00000419387 CACYBPQ9HB71 228 aaKnown RBP8.29□□□□□ -1.08
NUP50-205ENST00000419387 SLC7A10Q9NS82 523 aa8.29□□□□□ -1.08
NUP50-205ENST00000419387 ZNF443Q9Y2A4 671 aaPredicted RBP8.29□□□□□ -1.08
NUP50-205ENST00000419387 IFT52Q9Y366 437 aa8.29□□□□□ -1.08
NUP50-205ENST00000419387 PCDHB14Q9Y5E9 798 aa8.29□□□□□ -1.08
NUP50-205ENST00000419387 CADP27708 2225 aa8.29□□□□□ -1.08
NUP50-205ENST00000419387 FN1P02751 2386 aaKnown RBP8.28□□□□□ -1.08
NUP50-205ENST00000419387 AQP7P3A6NL99 342 aa8.28□□□□□ -1.08
NUP50-205ENST00000419387 A8MVM7 634 aa8.28□□□□□ -1.08
NUP50-205ENST00000419387 INAFM1C9JVW0 142 aa8.28□□□□□ -1.08
NUP50-205ENST00000419387 E7EQL1 145 aa8.28□□□□□ -1.08
NUP50-205ENST00000419387 M0R1B8 84 aa8.28□□□□□ -1.08
NUP50-205ENST00000419387 CLIC1O00299 241 aa8.28□□□□□ -1.08
NUP50-205ENST00000419387 WIPF1O43516 503 aa8.28□□□□□ -1.08
NUP50-205ENST00000419387 NDUFS7O75251 213 aa8.28□□□□□ -1.08
NUP50-205ENST00000419387 AKR7A3O95154 331 aa8.28□□□□□ -1.08
NUP50-205ENST00000419387 IGHV4-39P01824 125 aa8.28□□□□□ -1.08
NUP50-205ENST00000419387 NCF2P19878 526 aaPredicted RBP8.28□□□□□ -1.08
NUP50-205ENST00000419387 PTNP21246 168 aa8.28□□□□□ -1.08
NUP50-205ENST00000419387 TTKP33981 857 aa8.28□□□□□ -1.08
NUP50-205ENST00000419387 ACVR1BP36896 505 aa8.28□□□□□ -1.08
NUP50-205ENST00000419387 AQP5P55064 265 aa8.28□□□□□ -1.08
NUP50-205ENST00000419387 TGFBR3Q03167 851 aa8.28□□□□□ -1.08
NUP50-205ENST00000419387 BNIP2Q12982 314 aa8.28□□□□□ -1.08
NUP50-205ENST00000419387 RGNQ15493 299 aa8.28□□□□□ -1.08
NUP50-205ENST00000419387 ZNF311Q5JNZ3 666 aa8.28□□□□□ -1.08
NUP50-205ENST00000419387 RPS26P11Q5JNZ5 115 aaPredicted RBP8.28□□□□□ -1.08
NUP50-205ENST00000419387 C9orf135Q5VTT2 229 aa8.28□□□□□ -1.08
NUP50-205ENST00000419387 PRAMEF8Q5VWM4 474 aa8.28□□□□□ -1.08
NUP50-205ENST00000419387 PRAMEF7Q5VXH5 474 aa8.28□□□□□ -1.08
NUP50-205ENST00000419387 TMEM225Q6GV28 225 aa8.28□□□□□ -1.08
NUP50-205ENST00000419387 C17orf78Q8N4C9 275 aa8.28□□□□□ -1.08
NUP50-205ENST00000419387 ZIC4Q8N9L1 334 aa8.28□□□□□ -1.08
NUP50-205ENST00000419387 WDR31Q8NA23 367 aa8.28□□□□□ -1.08
NUP50-205ENST00000419387 POMGNT2Q8NAT1 580 aa8.28□□□□□ -1.08
NUP50-205ENST00000419387 C1orf162Q8NEQ5 155 aaPredicted RBP8.28□□□□□ -1.08
NUP50-205ENST00000419387 OR9K2Q8NGE7 335 aa8.28□□□□□ -1.08
NUP50-205ENST00000419387 HS6ST2Q96MM7 605 aa8.28□□□□□ -1.08
NUP50-205ENST00000419387 ZNF385AQ96PM9 386 aaKnown RBP8.28□□□□□ -1.08
NUP50-205ENST00000419387 DHRS9Q9BPW9 319 aa8.28□□□□□ -1.08
NUP50-205ENST00000419387 CCDC28BQ9BUN5 200 aa8.28□□□□□ -1.08
NUP50-205ENST00000419387 C1QTNF6Q9BXI9 259 aa8.28□□□□□ -1.08
NUP50-205ENST00000419387 PAIP1Q9H074 479 aaKnown RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms