RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 HIST1H2ACQ93077 130 aa13.27□□□□□ -0.28
HLA-DPA1-242ENST00000419277 ADOQ96SZ5 270 aa13.27□□□□□ -0.28
HLA-DPA1-242ENST00000419277 DDOQ99489 341 aa13.27□□□□□ -0.28
HLA-DPA1-242ENST00000419277 NUDT9Q9BW91 350 aa13.27□□□□□ -0.28
HLA-DPA1-242ENST00000419277 HDHD5Q9BXW7 423 aa13.27□□□□□ -0.28
HLA-DPA1-242ENST00000419277 SLC22A4Q9H015 551 aa13.27□□□□□ -0.28
HLA-DPA1-242ENST00000419277 TRIOBPQ9H2D6 2365 aa13.27□□□□□ -0.28
HLA-DPA1-242ENST00000419277 TRAV36DV7A0A075B6V5 113 aa13.27□□□□□ -0.29
HLA-DPA1-242ENST00000419277 HCRTR2O43614 444 aa13.27□□□□□ -0.29
HLA-DPA1-242ENST00000419277 TMCC2O75069 709 aa13.27□□□□□ -0.29
HLA-DPA1-242ENST00000419277 ICOSLGO75144 302 aa13.27□□□□□ -0.29
HLA-DPA1-242ENST00000419277 SLC25A12O75746 678 aa13.27□□□□□ -0.29
HLA-DPA1-242ENST00000419277 TACSTD2P09758 323 aa13.27□□□□□ -0.29
HLA-DPA1-242ENST00000419277 IL7P13232 177 aa13.27□□□□□ -0.29
HLA-DPA1-242ENST00000419277 SPI1P17947 270 aa13.27□□□□□ -0.29
HLA-DPA1-242ENST00000419277 PTNP21246 168 aa13.27□□□□□ -0.29
HLA-DPA1-242ENST00000419277 CXCR1P25024 350 aa13.27□□□□□ -0.29
HLA-DPA1-242ENST00000419277 ABCD3P28288 659 aa13.27□□□□□ -0.29
HLA-DPA1-242ENST00000419277 GTF2E2P29084 291 aaKnown RBP13.27□□□□□ -0.29
HLA-DPA1-242ENST00000419277 P2RX1P51575 399 aa13.27□□□□□ -0.29
HLA-DPA1-242ENST00000419277 SRSF5Q13243 272 aaKnown RBP13.27□□□□□ -0.29
HLA-DPA1-242ENST00000419277 MFSD13AQ14CX5 517 aa13.27□□□□□ -0.29
HLA-DPA1-242ENST00000419277 CDK5R1Q15078 307 aa13.27□□□□□ -0.29
HLA-DPA1-242ENST00000419277 SHBQ15464 509 aa13.27□□□□□ -0.29
HLA-DPA1-242ENST00000419277 HACD4Q5VWC8 232 aa13.27□□□□□ -0.29
HLA-DPA1-242ENST00000419277 FAM122BQ7Z309 247 aa13.27□□□□□ -0.29
HLA-DPA1-242ENST00000419277 SNX29P2Q8IUI4 249 aa13.27□□□□□ -0.29
HLA-DPA1-242ENST00000419277 CADM3Q8N126 398 aa13.27□□□□□ -0.29
HLA-DPA1-242ENST00000419277 SYT14Q8NB59 555 aa13.27□□□□□ -0.29
HLA-DPA1-242ENST00000419277 CYB561A3Q8NBI2 242 aa13.27□□□□□ -0.29
HLA-DPA1-242ENST00000419277 OR2T4Q8NH00 348 aa13.27□□□□□ -0.29
HLA-DPA1-242ENST00000419277 OMA1Q96E52 524 aa13.27□□□□□ -0.29
HLA-DPA1-242ENST00000419277 PGLYRP3Q96LB9 341 aa13.27□□□□□ -0.29
HLA-DPA1-242ENST00000419277 CMTM3Q96MX0 182 aa13.27□□□□□ -0.29
HLA-DPA1-242ENST00000419277 CDX2Q99626 313 aaPredicted RBP13.27□□□□□ -0.29
HLA-DPA1-242ENST00000419277 MRI1Q9BV20 369 aa13.27□□□□□ -0.29
HLA-DPA1-242ENST00000419277 MIXL1Q9H2W2 232 aa13.27□□□□□ -0.29
HLA-DPA1-242ENST00000419277 ISG20L2Q9H9L3 353 aaKnown RBP13.27□□□□□ -0.29
HLA-DPA1-242ENST00000419277 PRMT8Q9NR22 394 aaPredicted RBP13.27□□□□□ -0.29
HLA-DPA1-242ENST00000419277 ZMIZ1Q9ULJ6 1067 aa13.27□□□□□ -0.29
HLA-DPA1-242ENST00000419277 TMEM14AQ9Y6G1 99 aa13.27□□□□□ -0.29
HLA-DPA1-242ENST00000419277 FER1L5A0AVI2 2057 aa13.27□□□□□ -0.29
HLA-DPA1-242ENST00000419277 MPDZO75970 2070 aa13.27□□□□□ -0.29
HLA-DPA1-242ENST00000419277 ARID1BQ8NFD5 2236 aaPredicted RBP13.27□□□□□ -0.29
HLA-DPA1-242ENST00000419277 EXPH5Q8NEV8 1989 aa13.27□□□□□ -0.29
HLA-DPA1-242ENST00000419277 OR2T1O43869 369 aa13.26□□□□□ -0.29
HLA-DPA1-242ENST00000419277 EVI2BP34910 448 aa13.26□□□□□ -0.29
HLA-DPA1-242ENST00000419277 TALDO1P37837 337 aa13.26□□□□□ -0.29
HLA-DPA1-242ENST00000419277 TMED10P49755 219 aaKnown RBP13.26□□□□□ -0.29
HLA-DPA1-242ENST00000419277 POLR2HP52434 150 aaKnown RBP13.26□□□□□ -0.29
HLA-DPA1-242ENST00000419277 DLX5P56178 289 aa13.26□□□□□ -0.29
HLA-DPA1-242ENST00000419277 ZNF117Q03924 483 aa13.26□□□□□ -0.29
HLA-DPA1-242ENST00000419277 COL9A2Q14055 689 aaPredicted RBP13.26□□□□□ -0.29
HLA-DPA1-242ENST00000419277 PEAR1Q5VY43 1037 aaPredicted RBP13.26□□□□□ -0.29
HLA-DPA1-242ENST00000419277 CCBE1Q6UXH8 406 aaPredicted RBP13.26□□□□□ -0.29
HLA-DPA1-242ENST00000419277 MAMDC2Q7Z304 686 aaPredicted RBP13.26□□□□□ -0.29
HLA-DPA1-242ENST00000419277 GRINAQ7Z429 371 aa13.26□□□□□ -0.29
HLA-DPA1-242ENST00000419277 ZFP41Q8N8Y5 198 aa13.26□□□□□ -0.29
HLA-DPA1-242ENST00000419277 Q8N9G6 341 aaPredicted RBP13.26□□□□□ -0.29
HLA-DPA1-242ENST00000419277 LRRC75AQ8NAA5 344 aa13.26□□□□□ -0.29
HLA-DPA1-242ENST00000419277 FAM83FQ8NEG4 500 aaPredicted RBP13.26□□□□□ -0.29
HLA-DPA1-242ENST00000419277 RPS4Y2Q8TD47 263 aa13.26□□□□□ -0.29
HLA-DPA1-242ENST00000419277 STK35Q8TDR2 534 aa13.26□□□□□ -0.29
HLA-DPA1-242ENST00000419277 SNX33Q8WV41 574 aa13.26□□□□□ -0.29
HLA-DPA1-242ENST00000419277 METTL21AQ8WXB1 218 aa13.26□□□□□ -0.29
HLA-DPA1-242ENST00000419277 ST8SIA1Q92185 356 aa13.26□□□□□ -0.29
HLA-DPA1-242ENST00000419277 ATF6BQ99941 703 aa13.26□□□□□ -0.29
HLA-DPA1-242ENST00000419277 SOSTQ9BQB4 213 aa13.26□□□□□ -0.29
HLA-DPA1-242ENST00000419277 C19orf25Q9UFG5 118 aaPredicted RBP13.26□□□□□ -0.29
HLA-DPA1-242ENST00000419277 RARRES3Q9UL19 164 aa13.26□□□□□ -0.29
HLA-DPA1-242ENST00000419277 RP1P56715 2156 aa13.26□□□□□ -0.29
HLA-DPA1-242ENST00000419277 OR2W5A6NFC9 320 aa13.25□□□□□ -0.29
HLA-DPA1-242ENST00000419277 ZNF879B4DU55 563 aa13.25□□□□□ -0.29
HLA-DPA1-242ENST00000419277 TRAPPC2P0DI81 140 aa13.25□□□□□ -0.29
HLA-DPA1-242ENST00000419277 TRAPPC2BP0DI82 140 aa13.25□□□□□ -0.29
HLA-DPA1-242ENST00000419277 GP1BBP13224 206 aa13.25□□□□□ -0.29
HLA-DPA1-242ENST00000419277 TACR3P29371 465 aa13.25□□□□□ -0.29
HLA-DPA1-242ENST00000419277 RBMS1P29558 406 aaKnown RBP13.25□□□□□ -0.29
HLA-DPA1-242ENST00000419277 RPS5P46782 204 aaKnown RBP13.25□□□□□ -0.29
HLA-DPA1-242ENST00000419277 NR0B1P51843 470 aaKnown RBP13.25□□□□□ -0.29
HLA-DPA1-242ENST00000419277 SIRPAP78324 504 aa13.25□□□□□ -0.29
HLA-DPA1-242ENST00000419277 NDUFAF6Q330K2 333 aa13.25□□□□□ -0.29
HLA-DPA1-242ENST00000419277 VWA2Q5GFL6 755 aa13.25□□□□□ -0.29
HLA-DPA1-242ENST00000419277 FAM69AQ5T7M9 428 aa13.25□□□□□ -0.29
HLA-DPA1-242ENST00000419277 ARL9Q6T311 187 aa13.25□□□□□ -0.29
HLA-DPA1-242ENST00000419277 CBLN3Q6UW01 205 aa13.25□□□□□ -0.29
HLA-DPA1-242ENST00000419277 BAIAP2L2Q6UXY1 529 aa13.25□□□□□ -0.29
HLA-DPA1-242ENST00000419277 FAM220AQ7Z4H9 259 aa13.25□□□□□ -0.29
HLA-DPA1-242ENST00000419277 STT3BQ8TCJ2 826 aa13.25□□□□□ -0.29
HLA-DPA1-242ENST00000419277 SAP25Q8TEE9 199 aa13.25□□□□□ -0.29
HLA-DPA1-242ENST00000419277 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.25□□□□□ -0.29
HLA-DPA1-242ENST00000419277 CLIP3Q96DZ5 547 aa13.25□□□□□ -0.29
HLA-DPA1-242ENST00000419277 NUDT22Q9BRQ3 303 aa13.25□□□□□ -0.29
HLA-DPA1-242ENST00000419277 SLC26A1Q9H2B4 701 aa13.25□□□□□ -0.29
HLA-DPA1-242ENST00000419277 GRHPRQ9UBQ7 328 aa13.25□□□□□ -0.29
HLA-DPA1-242ENST00000419277 PILRBQ9UKJ0 227 aa13.25□□□□□ -0.29
HLA-DPA1-242ENST00000419277 J3QLW9 94 aa13.25□□□□□ -0.29
HLA-DPA1-242ENST00000419277 SNPHO15079 494 aa13.25□□□□□ -0.29
HLA-DPA1-242ENST00000419277 RENP00797 406 aa13.25□□□□□ -0.29
HLA-DPA1-242ENST00000419277 ZNF19P17023 458 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms