RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 PHF1O43189 567 aaPredicted RBP12.94□□□□□ -0.34
RPS28-201ENST00000417088 WNT11O96014 354 aa12.94□□□□□ -0.34
RPS28-201ENST00000417088 F12P00748 615 aaPredicted RBP12.94□□□□□ -0.34
RPS28-201ENST00000417088 PGRP06401 933 aa12.94□□□□□ -0.34
RPS28-201ENST00000417088 GPIP06744 558 aa12.94□□□□□ -0.34
RPS28-201ENST00000417088 CSF3P09919 207 aa12.94□□□□□ -0.34
RPS28-201ENST00000417088 UQCRBP14927 111 aa12.94□□□□□ -0.34
RPS28-201ENST00000417088 CDH2P19022 906 aaPredicted RBP12.94□□□□□ -0.34
RPS28-201ENST00000417088 USF1P22415 310 aaPredicted RBP12.94□□□□□ -0.34
RPS28-201ENST00000417088 STX3Q13277 289 aa12.94□□□□□ -0.34
RPS28-201ENST00000417088 SWI5Q1ZZU3 235 aa12.94□□□□□ -0.34
RPS28-201ENST00000417088 HIKESHIQ53FT3 197 aa12.94□□□□□ -0.34
RPS28-201ENST00000417088 CYB5R2Q6BCY4 276 aa12.94□□□□□ -0.34
RPS28-201ENST00000417088 WDR93Q6P2C0 686 aa12.94□□□□□ -0.34
RPS28-201ENST00000417088 VRK2Q86Y07 508 aa12.94□□□□□ -0.34
RPS28-201ENST00000417088 PEX5LQ8IYB4 626 aa12.94□□□□□ -0.34
RPS28-201ENST00000417088 ZNF440Q8IYI8 595 aa12.94□□□□□ -0.34
RPS28-201ENST00000417088 MREGQ8N565 214 aa12.94□□□□□ -0.34
RPS28-201ENST00000417088 POMGNT2Q8NAT1 580 aa12.94□□□□□ -0.34
RPS28-201ENST00000417088 AURKBQ96GD4 344 aaPredicted RBP12.94□□□□□ -0.34
RPS28-201ENST00000417088 GPR45Q9Y5Y3 372 aa12.94□□□□□ -0.34
RPS28-201ENST00000417088 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.94□□□□□ -0.344e-10■■■■□ 24.6
RPS28-201ENST00000417088 CDHR4A6H8M9 788 aa12.93□□□□□ -0.34
RPS28-201ENST00000417088 VWC2LB2RUY7 222 aa12.93□□□□□ -0.34
RPS28-201ENST00000417088 KLF11O14901 512 aa12.93□□□□□ -0.34
RPS28-201ENST00000417088 GKN3PP0CG01 181 aa12.93□□□□□ -0.34
RPS28-201ENST00000417088 CXCR1P25024 350 aa12.93□□□□□ -0.34
RPS28-201ENST00000417088 ACAA2P42765 397 aaKnown RBP12.93□□□□□ -0.34
RPS28-201ENST00000417088 P2RY4P51582 365 aa12.93□□□□□ -0.34
RPS28-201ENST00000417088 MVDP53602 400 aa12.93□□□□□ -0.34
RPS28-201ENST00000417088 LRRC74AQ0VAA2 488 aa12.93□□□□□ -0.34
RPS28-201ENST00000417088 BNIP2Q12982 314 aa12.93□□□□□ -0.34
RPS28-201ENST00000417088 KLHL24Q6TFL4 600 aa12.93□□□□□ -0.34
RPS28-201ENST00000417088 SPATA19Q7Z5L4 167 aa12.93□□□□□ -0.34
RPS28-201ENST00000417088 OR52P1PQ8NH57 321 aa12.93□□□□□ -0.34
RPS28-201ENST00000417088 FBXO17Q96EF6 278 aa12.93□□□□□ -0.34
RPS28-201ENST00000417088 BEX2Q9BXY8 128 aa12.93□□□□□ -0.34
RPS28-201ENST00000417088 PIF1Q9H611 641 aa12.93□□□□□ -0.34
RPS28-201ENST00000417088 OBP2BQ9NPH6 170 aa12.93□□□□□ -0.34
RPS28-201ENST00000417088 SLC6A13Q9NSD5 602 aa12.93□□□□□ -0.34
RPS28-201ENST00000417088 PRDM4Q9UKN5 801 aa12.93□□□□□ -0.34
RPS28-201ENST00000417088 MALRD1Q5VYJ5 2156 aa12.93□□□□□ -0.34
RPS28-201ENST00000417088 DSPPQ9NZW4 1301 aa12.92□□□□□ -0.34
RPS28-201ENST00000417088 SVEP1Q4LDE5 3571 aa12.92□□□□□ -0.34
RPS28-201ENST00000417088 IGHV1-18A0A0C4DH31 117 aa12.92□□□□□ -0.34
RPS28-201ENST00000417088 KRT75O95678 551 aa12.92□□□□□ -0.34
RPS28-201ENST00000417088 LGI1O95970 557 aa12.92□□□□□ -0.34
RPS28-201ENST00000417088 ZNF16P17020 682 aaPredicted RBP12.92□□□□□ -0.34
RPS28-201ENST00000417088 LSM11P83369 360 aaKnown RBP eCLIP12.92□□□□□ -0.34
RPS28-201ENST00000417088 LGALS3BPQ08380 585 aa12.92□□□□□ -0.34
RPS28-201ENST00000417088 BST1Q10588 318 aa12.92□□□□□ -0.34
RPS28-201ENST00000417088 TBRG1Q3YBR2 411 aa12.92□□□□□ -0.34
RPS28-201ENST00000417088 LIN52Q52LA3 116 aa12.92□□□□□ -0.34
RPS28-201ENST00000417088 TNFAIP8L3Q5GJ75 292 aa12.92□□□□□ -0.34
RPS28-201ENST00000417088 TMEM225Q6GV28 225 aa12.92□□□□□ -0.34
RPS28-201ENST00000417088 ZNF836Q6ZNA1 936 aa12.92□□□□□ -0.34
RPS28-201ENST00000417088 ABHD12BQ7Z5M8 362 aaPredicted RBP12.92□□□□□ -0.34
RPS28-201ENST00000417088 GPAT4Q86UL3 456 aa12.92□□□□□ -0.34
RPS28-201ENST00000417088 CADM2Q8N3J6 435 aa12.92□□□□□ -0.34
RPS28-201ENST00000417088 ARIH2OSQ8N7S6 290 aa12.92□□□□□ -0.34
RPS28-201ENST00000417088 OR1K1Q8NGR3 316 aa12.92□□□□□ -0.34
RPS28-201ENST00000417088 SORCS2Q96PQ0 1159 aa12.92□□□□□ -0.34
RPS28-201ENST00000417088 SLC38A2Q96QD8 506 aa12.92□□□□□ -0.34
RPS28-201ENST00000417088 TAPBPLQ9BX59 468 aa12.92□□□□□ -0.34
RPS28-201ENST00000417088 WDR55Q9H6Y2 383 aaPredicted RBP12.92□□□□□ -0.34
RPS28-201ENST00000417088 KCNK9Q9NPC2 374 aa12.92□□□□□ -0.34
RPS28-201ENST00000417088 TMEM45AQ9NWC5 275 aa12.92□□□□□ -0.34
RPS28-201ENST00000417088 ADPRHL2Q9NX46 363 aa12.92□□□□□ -0.34
RPS28-201ENST00000417088 LPAR3Q9UBY5 353 aa12.92□□□□□ -0.34
RPS28-201ENST00000417088 A8MVM7 634 aa12.91□□□□□ -0.34
RPS28-201ENST00000417088 RFXANKO14593 260 aa12.91□□□□□ -0.34
RPS28-201ENST00000417088 FRS3O43559 492 aa12.91□□□□□ -0.34
RPS28-201ENST00000417088 LMX1BO60663 402 aa12.91□□□□□ -0.34
RPS28-201ENST00000417088 KRT33AO76009 404 aa12.91□□□□□ -0.34
RPS28-201ENST00000417088 PRG2P13727 222 aa12.91□□□□□ -0.34
RPS28-201ENST00000417088 ETFAP13804 333 aa12.91□□□□□ -0.34
RPS28-201ENST00000417088 EPHA3P29320 983 aa12.91□□□□□ -0.34
RPS28-201ENST00000417088 SELENOPP49908 381 aa12.91□□□□□ -0.34
RPS28-201ENST00000417088 PDLIM4P50479 330 aa12.91□□□□□ -0.34
RPS28-201ENST00000417088 WBP2NLQ6ICG8 309 aa12.91□□□□□ -0.34
RPS28-201ENST00000417088 CREB3L2Q70SY1 520 aa12.91□□□□□ -0.34
RPS28-201ENST00000417088 LINGO2Q7L985 606 aa12.91□□□□□ -0.34
RPS28-201ENST00000417088 EPHX4Q8IUS5 362 aa12.91□□□□□ -0.34
RPS28-201ENST00000417088 CLIP4Q8N3C7 705 aa12.91□□□□□ -0.34
RPS28-201ENST00000417088 BCL2L2Q92843 193 aaPredicted RBP12.91□□□□□ -0.34
RPS28-201ENST00000417088 ZBTB18Q99592 522 aa12.91□□□□□ -0.34
RPS28-201ENST00000417088 SHARPINQ9H0F6 387 aa12.91□□□□□ -0.34
RPS28-201ENST00000417088 P2RX2Q9UBL9 471 aa12.91□□□□□ -0.34
RPS28-201ENST00000417088 ZNF443Q9Y2A4 671 aaPredicted RBP12.91□□□□□ -0.34
RPS28-201ENST00000417088 CHST2Q9Y4C5 530 aa12.91□□□□□ -0.34
RPS28-201ENST00000417088 ZNF587BE7ETH6 402 aa12.9□□□□□ -0.34
RPS28-201ENST00000417088 NPIPB7O75200 414 aa12.9□□□□□ -0.34
RPS28-201ENST00000417088 VAMP5O95183 116 aa12.9□□□□□ -0.34
RPS28-201ENST00000417088 BCHEP06276 602 aa12.9□□□□□ -0.34
RPS28-201ENST00000417088 TFPTP0C1Z6 253 aa12.9□□□□□ -0.34
RPS28-201ENST00000417088 SERPINF1P36955 418 aa12.9□□□□□ -0.34
RPS28-201ENST00000417088 CRATP43155 626 aa12.9□□□□□ -0.34
RPS28-201ENST00000417088 NR4A2P43354 598 aa12.9□□□□□ -0.34
RPS28-201ENST00000417088 GZMKP49863 264 aa12.9□□□□□ -0.34
RPS28-201ENST00000417088 COPZ1P61923 177 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 126.4 ms