RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 ANKRD55Q3KP44 614 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 ALKBH6Q3KRA9 238 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 TMEM41BQ5BJD5 291 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 GPR107Q5VW38 600 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 WSCD1Q658N2 575 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 REP15Q6BDI9 236 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 PRR5LQ6MZQ0 368 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 UGT3A1Q6NUS8 523 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 XKRXQ6PP77 449 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 TPGS1Q6ZTW0 290 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 NDUFAF7Q7L592 441 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 UNC93AQ86WB7 457 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 SIAH3Q8IW03 269 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 ZNF595Q8IYB9 648 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 CENPLQ8N0S6 344 aaPredicted RBP3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 C8orf59Q8N0T1 100 aaPredicted RBP3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 GPR137CQ8N3F9 429 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 CBR4Q8N4T8 237 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 CERS5Q8N5B7 392 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 FAM86B1Q8N7N1 296 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 COLGALT1Q8NBJ5 622 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 OR7G1Q8NGA0 311 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 OR10S1Q8NGN2 331 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 RHOXF1Q8NHV9 184 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 JOSD2Q8TAC2 188 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 NDNFQ8TB73 568 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 UBA3Q8TBC4 463 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 ZNF596Q8TC21 504 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 SPPL2BQ8TCT7 592 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 MAPK15Q8TD08 544 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 CANT1Q8WVQ1 401 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 FAM151AQ8WW52 585 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 RXFP2Q8WXD0 754 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 SPSB1Q96BD6 273 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 FAM122AQ96E09 287 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 L3HYPDHQ96EM0 354 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 BSCL2Q96G97 398 aaPredicted RBP3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 C4orf36Q96KX1 117 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 GLT1D1Q96MS3 346 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 NPY6RQ99463 290 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 SLC29A1Q99808 456 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 CIB1Q99828 191 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 EGFL8Q99944 293 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 KCNS3Q9BQ31 491 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 RTP3Q9BQQ7 232 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 ALKBH7Q9BT30 221 aaPredicted RBP3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 KIFC1Q9BW19 673 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 POLR3FQ9H1D9 316 aaPredicted RBP3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 MTIF3Q9H2K0 278 aaKnown RBP3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 MMP27Q9H306 513 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 AUNIPQ9H7T9 357 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 NOL11Q9H8H0 719 aaKnown RBP3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 ACTR8Q9H981 624 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 RAVER2Q9HCJ3 691 aaKnown RBP3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 ZFP14Q9HCL3 533 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 XPNPEP1Q9NQW7 623 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 PXMP2Q9NR77 195 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 SMOXQ9NWM0 555 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 PAQR5Q9NXK6 330 aaPredicted RBP3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 ERVK-18Q9QC07 812 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 UBQLN2Q9UHD9 624 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 CRLS1Q9UJA2 301 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 RHBDD3Q9Y3P4 386 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 GRIP1Q9Y3R0 1128 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 ARID2Q68CP9 1835 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 XIRP1Q702N8 1843 aaKnown RBP3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 AHDC1Q5TGY3 1603 aaPredicted RBP3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 ZNF541Q9H0D2 1346 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 SIPA1L1O43166 1804 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 PSME4Q14997 1843 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 COL16A1Q07092 1604 aaPredicted RBP3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 A0A1B0GU03 582 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 MAGEB17A8MXT2 336 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 PRR32B1ATL7 298 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 GPR171O14626 319 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 ABCD4O14678 606 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 RAD51BO15315 384 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 CFLARO15519 480 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 ADAM12O43184 909 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 GMNNO75496 209 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 APOA1P02647 267 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 STAG3L1P0CL83 205 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 STAG3L2P0CL84 134 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 CEACAM1P13688 526 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 GFAPP14136 432 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 GPX3P22352 226 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 CRHBPP24387 322 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 AZGP1P25311 298 aaKnown RBP3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 PSMB4P28070 264 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 NUDT1P36639 197 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 ETV6P41212 452 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 SLC6A12P48065 614 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 CSNK1EP49674 416 aaKnown RBP3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 CEBPDP49716 269 aaPredicted RBP3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 ACOT2P49753 483 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 PKNOX1P55347 436 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 DEFA1P59665 94 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 DEFA3P59666 94 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 RAB10P61026 200 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 HNRNPKP61978 463 aaKnown RBP eCLIP3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms