RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 PSME3P61289 254 aa27.65■■■□□ 2.02
TRAF3IP1-203ENST00000409739 ZNF613Q6PF04 617 aa27.65■■■□□ 2.02
TRAF3IP1-203ENST00000409739 TMEM99Q8N816 258 aa27.65■■■□□ 2.02
TRAF3IP1-203ENST00000409739 PROX1Q92786 737 aa27.65■■■□□ 2.02
TRAF3IP1-203ENST00000409739 DACH2Q96NX9 599 aa27.65■■■□□ 2.02
TRAF3IP1-203ENST00000409739 KLHL4Q9C0H6 718 aa27.65■■■□□ 2.02
TRAF3IP1-203ENST00000409739 ALG2Q9H553 416 aa27.65■■■□□ 2.02
TRAF3IP1-203ENST00000409739 BAG5Q9UL15 447 aa27.65■■■□□ 2.02
TRAF3IP1-203ENST00000409739 SLC9A8Q9Y2E8 581 aa27.65■■■□□ 2.02
TRAF3IP1-203ENST00000409739 AQP7P3A6NL99 342 aa27.64■■■□□ 2.02
TRAF3IP1-203ENST00000409739 FTCDNL1E5RQL4 147 aa27.64■■■□□ 2.02
TRAF3IP1-203ENST00000409739 IFNA14P01570 189 aa27.64■■■□□ 2.02
TRAF3IP1-203ENST00000409739 RPS5P46782 204 aaKnown RBP27.64■■■□□ 2.02
TRAF3IP1-203ENST00000409739 CYBRD1Q53TN4 286 aa27.64■■■□□ 2.02
TRAF3IP1-203ENST00000409739 ENTPD8Q5MY95 495 aa27.64■■■□□ 2.02
TRAF3IP1-203ENST00000409739 SWT1Q5T5J6 900 aaKnown RBP27.64■■■□□ 2.02
TRAF3IP1-203ENST00000409739 C5orf46Q6UWT4 87 aa27.64■■■□□ 2.02
TRAF3IP1-203ENST00000409739 STAC2Q6ZMT1 411 aa27.64■■■□□ 2.02
TRAF3IP1-203ENST00000409739 TSPYL5Q86VY4 417 aaPredicted RBP27.64■■■□□ 2.02
TRAF3IP1-203ENST00000409739 MFSD8Q8NHS3 518 aa27.64■■■□□ 2.02
TRAF3IP1-203ENST00000409739 RNF217Q8TC41 542 aa27.64■■■□□ 2.02
TRAF3IP1-203ENST00000409739 PCDHAC1Q9H158 963 aa27.64■■■□□ 2.02
TRAF3IP1-203ENST00000409739 ARL8BQ9NVJ2 186 aa27.64■■■□□ 2.02
TRAF3IP1-203ENST00000409739 NDRG3Q9UGV2 375 aa27.64■■■□□ 2.02
TRAF3IP1-203ENST00000409739 CSMD2Q7Z408 3487 aa27.64■■■□□ 2.02
TRAF3IP1-203ENST00000409739 POLQO75417 2590 aa27.64■■■□□ 2.02
TRAF3IP1-203ENST00000409739 ANKRD17O75179 2603 aaKnown RBP27.63■■■□□ 2.01
TRAF3IP1-203ENST00000409739 PDZD2O15018 2839 aa27.63■■■□□ 2.01
TRAF3IP1-203ENST00000409739 CPSF4LA6NMK7 179 aaKnown RBP27.63■■■□□ 2.01
TRAF3IP1-203ENST00000409739 A6NNC1 897 aa27.63■■■□□ 2.01
TRAF3IP1-203ENST00000409739 FZD7O75084 574 aa27.63■■■□□ 2.01
TRAF3IP1-203ENST00000409739 TNFRSF1BP20333 461 aa27.63■■■□□ 2.01
TRAF3IP1-203ENST00000409739 P2RY4P51582 365 aa27.63■■■□□ 2.01
TRAF3IP1-203ENST00000409739 DAZAP2Q15038 168 aaPredicted RBP27.63■■■□□ 2.01
TRAF3IP1-203ENST00000409739 ZC3HAV1Q7Z2W4 902 aaKnown RBP27.63■■■□□ 2.01
TRAF3IP1-203ENST00000409739 TMEM200AQ86VY9 491 aa27.63■■■□□ 2.01
TRAF3IP1-203ENST00000409739 CARM1Q86X55 608 aa27.63■■■□□ 2.01
TRAF3IP1-203ENST00000409739 GABRG1Q8N1C3 465 aa27.63■■■□□ 2.01
TRAF3IP1-203ENST00000409739 LURAP1Q96LR2 239 aa27.63■■■□□ 2.01
TRAF3IP1-203ENST00000409739 FANCFQ9NPI8 374 aa27.63■■■□□ 2.01
TRAF3IP1-203ENST00000409739 PRSS50Q9UI38 385 aa27.63■■■□□ 2.01
TRAF3IP1-203ENST00000409739 NOSIPQ9Y314 301 aaKnown RBP27.63■■■□□ 2.01
TRAF3IP1-203ENST00000409739 SH3GLB1Q9Y371 365 aa27.63■■■□□ 2.01
TRAF3IP1-203ENST00000409739 NDUFAB1O14561 156 aa27.62■■■□□ 2.01
TRAF3IP1-203ENST00000409739 GPR171O14626 319 aa27.62■■■□□ 2.01
TRAF3IP1-203ENST00000409739 SLC17A1Q14916 467 aa27.62■■■□□ 2.01
TRAF3IP1-203ENST00000409739 GKAP1Q5VSY0 366 aaPredicted RBP27.62■■■□□ 2.01
TRAF3IP1-203ENST00000409739 P3H2Q8IVL5 708 aa27.62■■■□□ 2.01
TRAF3IP1-203ENST00000409739 ADAMTS16Q8TE57 1224 aa27.62■■■□□ 2.01
TRAF3IP1-203ENST00000409739 WFIKKN1Q96NZ8 548 aa27.62■■■□□ 2.01
TRAF3IP1-203ENST00000409739 SPAG4Q9NPE6 437 aa27.62■■■□□ 2.01
TRAF3IP1-203ENST00000409739 TAGLN3Q9UI15 199 aa27.62■■■□□ 2.01
TRAF3IP1-203ENST00000409739 ADAM21Q9UKJ8 722 aa27.62■■■□□ 2.01
TRAF3IP1-203ENST00000409739 FLVCR1Q9Y5Y0 555 aa27.62■■■□□ 2.01
TRAF3IP1-203ENST00000409739 FAM221AA4D161 298 aa27.61■■■□□ 2.01
TRAF3IP1-203ENST00000409739 CHP2O43745 196 aa27.61■■■□□ 2.01
TRAF3IP1-203ENST00000409739 CTAG2O75638 210 aa27.61■■■□□ 2.01
TRAF3IP1-203ENST00000409739 LYPD3O95274 346 aa27.61■■■□□ 2.01
TRAF3IP1-203ENST00000409739 THY1P04216 161 aa27.61■■■□□ 2.01
TRAF3IP1-203ENST00000409739 PTNP21246 168 aa27.61■■■□□ 2.01
TRAF3IP1-203ENST00000409739 NTF4P34130 210 aa27.61■■■□□ 2.01
TRAF3IP1-203ENST00000409739 CXorf67Q86X51 503 aaPredicted RBP27.61■■■□□ 2.01
TRAF3IP1-203ENST00000409739 TAAR8Q969N4 342 aa27.61■■■□□ 2.01
TRAF3IP1-203ENST00000409739 SLC25A36Q96CQ1 311 aa27.61■■■□□ 2.01
TRAF3IP1-203ENST00000409739 KCTD14Q9BQ13 255 aaPredicted RBP27.61■■■□□ 2.01
TRAF3IP1-203ENST00000409739 MED18Q9BUE0 208 aa27.61■■■□□ 2.01
TRAF3IP1-203ENST00000409739 TRAV36DV7A0A075B6V5 113 aa27.6■■■□□ 2.01
TRAF3IP1-203ENST00000409739 CXCR6O00574 342 aa27.6■■■□□ 2.01
TRAF3IP1-203ENST00000409739 PSMB1P20618 241 aaKnown RBP27.6■■■□□ 2.01
TRAF3IP1-203ENST00000409739 FAM69AQ5T7M9 428 aa27.6■■■□□ 2.01
TRAF3IP1-203ENST00000409739 ZNF100Q8IYN0 542 aa27.6■■■□□ 2.01
TRAF3IP1-203ENST00000409739 TMEM43Q9BTV4 400 aa27.6■■■□□ 2.01
TRAF3IP1-203ENST00000409739 SF3B5Q9BWJ5 86 aaKnown RBP27.6■■■□□ 2.01
TRAF3IP1-203ENST00000409739 AKAP6Q13023 2319 aa27.59■■■□□ 2.01
TRAF3IP1-203ENST00000409739 TRAPPC13A5PLN9 417 aa27.59■■■□□ 2.01
TRAF3IP1-203ENST00000409739 ANKRD34AQ69YU3 496 aa27.59■■■□□ 2.01
TRAF3IP1-203ENST00000409739 LINC00114Q6XXX2 140 aa27.59■■■□□ 2.01
TRAF3IP1-203ENST00000409739 WDR88Q6ZMY6 472 aa27.59■■■□□ 2.01
TRAF3IP1-203ENST00000409739 Q6ZT83 130 aa27.59■■■□□ 2.01
TRAF3IP1-203ENST00000409739 OR9K2Q8NGE7 335 aa27.59■■■□□ 2.01
TRAF3IP1-203ENST00000409739 TPD52L3Q96J77 140 aa27.59■■■□□ 2.01
TRAF3IP1-203ENST00000409739 SPG11Q96JI7 2443 aa27.58■■■□□ 2.01
TRAF3IP1-203ENST00000409739 GSTA4O15217 222 aa27.58■■■□□ 2.01
TRAF3IP1-203ENST00000409739 OR2T1O43869 369 aa27.58■■■□□ 2.01
TRAF3IP1-203ENST00000409739 GTF2E2P29084 291 aaKnown RBP27.58■■■□□ 2.01
TRAF3IP1-203ENST00000409739 OR1E2P47887 323 aa27.58■■■□□ 2.01
TRAF3IP1-203ENST00000409739 SELENOWP63302 87 aa27.58■■■□□ 2.01
TRAF3IP1-203ENST00000409739 C22orf34Q6ZV56 151 aa27.58■■■□□ 2.01
TRAF3IP1-203ENST00000409739 GPAT4Q86UL3 456 aa27.58■■■□□ 2.01
TRAF3IP1-203ENST00000409739 FITM2Q8N6M3 262 aa27.58■■■□□ 2.01
TRAF3IP1-203ENST00000409739 CCDC197Q8NCU1 140 aa27.58■■■□□ 2.01
TRAF3IP1-203ENST00000409739 APH1AQ96BI3 265 aa27.58■■■□□ 2.01
TRAF3IP1-203ENST00000409739 EPYCQ99645 322 aa27.58■■■□□ 2.01
TRAF3IP1-203ENST00000409739 RASSF1Q9NS23 344 aa27.58■■■□□ 2.01
TRAF3IP1-203ENST00000409739 SEC14L4Q9UDX3 406 aa27.58■■■□□ 2.01
TRAF3IP1-203ENST00000409739 SLC7A7Q9UM01 511 aa27.58■■■□□ 2.01
TRAF3IP1-203ENST00000409739 GPR52Q9Y2T5 361 aa27.58■■■□□ 2.01
TRAF3IP1-203ENST00000409739 CSMD1Q96PZ7 3565 aa27.58■■■□□ 2.01
TRAF3IP1-203ENST00000409739 MRPL33O75394 65 aaKnown RBP27.57■■■□□ 2
TRAF3IP1-203ENST00000409739 ADAP00813 363 aa27.57■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms