RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 TNFRSF11BO00300 401 aa11.87□□□□□ -0.51
USP44-202ENST00000393091 SMAD9O15198 467 aaKnown RBP11.87□□□□□ -0.51
USP44-202ENST00000393091 AHSA1O95433 338 aa11.87□□□□□ -0.51
USP44-202ENST00000393091 HPRP00739 348 aa11.87□□□□□ -0.51
USP44-202ENST00000393091 ADAP00813 363 aa11.87□□□□□ -0.51
USP44-202ENST00000393091 LDLRP01130 860 aa11.87□□□□□ -0.51
USP44-202ENST00000393091 FUT4P22083 530 aa11.87□□□□□ -0.51
USP44-202ENST00000393091 CARD18P57730 90 aa11.87□□□□□ -0.51
USP44-202ENST00000393091 SPIBQ01892 262 aa11.87□□□□□ -0.51
USP44-202ENST00000393091 TSPAN31Q12999 210 aa11.87□□□□□ -0.51
USP44-202ENST00000393091 PGBD2Q6P3X8 592 aa11.87□□□□□ -0.51
USP44-202ENST00000393091 MTFR2Q6P444 385 aa11.87□□□□□ -0.51
USP44-202ENST00000393091 POMZP3Q6PJE2 187 aa11.87□□□□□ -0.51
USP44-202ENST00000393091 SEM1Q6ZVN7 128 aa11.87□□□□□ -0.51
USP44-202ENST00000393091 PRICKLE2Q7Z3G6 844 aa11.87□□□□□ -0.51
USP44-202ENST00000393091 ARL5BQ96KC2 179 aa11.87□□□□□ -0.51
USP44-202ENST00000393091 SNX18Q96RF0 628 aa11.87□□□□□ -0.51
USP44-202ENST00000393091 PNPLA3Q9NST1 481 aa11.87□□□□□ -0.51
USP44-202ENST00000393091 STX18Q9P2W9 335 aaKnown RBP11.87□□□□□ -0.51
USP44-202ENST00000393091 RPH3AQ9Y2J0 694 aaPredicted RBP11.87□□□□□ -0.51
USP44-202ENST00000393091 MPDZO75970 2070 aa11.86□□□□□ -0.51
USP44-202ENST00000393091 ZNF716A6NP11 495 aa11.86□□□□□ -0.51
USP44-202ENST00000393091 CLCA1A8K7I4 914 aa11.86□□□□□ -0.51
USP44-202ENST00000393091 IMPA2O14732 288 aa11.86□□□□□ -0.51
USP44-202ENST00000393091 APEHP13798 732 aaKnown RBP11.86□□□□□ -0.51
USP44-202ENST00000393091 GSTM3P21266 225 aa11.86□□□□□ -0.51
USP44-202ENST00000393091 ZNF133P52736 654 aaPredicted RBP11.86□□□□□ -0.51
USP44-202ENST00000393091 EXOC3L2Q2M3D2 409 aa11.86□□□□□ -0.51
USP44-202ENST00000393091 TMEM176BQ3YBM2 270 aaPredicted RBP11.86□□□□□ -0.51
USP44-202ENST00000393091 SGTBQ96EQ0 304 aa11.86□□□□□ -0.51
USP44-202ENST00000393091 CHST11Q9NPF2 352 aa11.86□□□□□ -0.51
USP44-202ENST00000393091 JKAMPQ9P055 326 aa11.86□□□□□ -0.51
USP44-202ENST00000393091 MEMO1Q9Y316 297 aa11.86□□□□□ -0.51
USP44-202ENST00000393091 A0A1B0GUH1 482 aa11.86□□□□□ -0.51
USP44-202ENST00000393091 PLPP3O14495 311 aa11.86□□□□□ -0.51
USP44-202ENST00000393091 TXNDC12O95881 172 aa11.86□□□□□ -0.51
USP44-202ENST00000393091 TP53P04637 393 aaPredicted RBP11.86□□□□□ -0.51
USP44-202ENST00000393091 ACVR2AP27037 513 aa11.86□□□□□ -0.51
USP44-202ENST00000393091 C19orf57Q0VDD7 668 aa11.86□□□□□ -0.51
USP44-202ENST00000393091 ANKK1Q8NFD2 765 aa11.86□□□□□ -0.51
USP44-202ENST00000393091 OR5M1Q8NGP8 315 aa11.86□□□□□ -0.51
USP44-202ENST00000393091 OR5J2Q8NH18 312 aa11.86□□□□□ -0.51
USP44-202ENST00000393091 BPIFA2Q96DR5 249 aa11.86□□□□□ -0.51
USP44-202ENST00000393091 DCLRE1BQ9H816 532 aa11.86□□□□□ -0.51
USP44-202ENST00000393091 WIPF3A6NGB9 483 aa11.85□□□□□ -0.51
USP44-202ENST00000393091 H0Y3Z8 333 aa11.85□□□□□ -0.51
USP44-202ENST00000393091 PRRG2O14669 202 aa11.85□□□□□ -0.51
USP44-202ENST00000393091 TNFSF11O14788 317 aa11.85□□□□□ -0.51
USP44-202ENST00000393091 AHCYL1O43865 530 aa11.85□□□□□ -0.51
USP44-202ENST00000393091 ENTPD5O75356 428 aa11.85□□□□□ -0.51
USP44-202ENST00000393091 CCNB2O95067 398 aa11.85□□□□□ -0.51
USP44-202ENST00000393091 CNOT4O95628 575 aaKnown RBP11.85□□□□□ -0.51
USP44-202ENST00000393091 ANXA8P13928 327 aa11.85□□□□□ -0.51
USP44-202ENST00000393091 C4orf17Q53FE4 359 aa11.85□□□□□ -0.51
USP44-202ENST00000393091 GTF2IRD2BQ6EKJ0 949 aa11.85□□□□□ -0.51
USP44-202ENST00000393091 RASSF6Q6ZTQ3 369 aa11.85□□□□□ -0.51
USP44-202ENST00000393091 H1FNTQ75WM6 255 aaPredicted RBP11.85□□□□□ -0.51
USP44-202ENST00000393091 TMEM179BQ7Z7N9 219 aa11.85□□□□□ -0.51
USP44-202ENST00000393091 GTF2IRD2Q86UP8 949 aa11.85□□□□□ -0.51
USP44-202ENST00000393091 PQLC1Q8N2U9 271 aa11.85□□□□□ -0.51
USP44-202ENST00000393091 PACRGLQ8N7B6 248 aa11.85□□□□□ -0.51
USP44-202ENST00000393091 OR4K5Q8NGD3 323 aa11.85□□□□□ -0.51
USP44-202ENST00000393091 OSTF1Q92882 214 aa11.85□□□□□ -0.51
USP44-202ENST00000393091 GMPPAQ96IJ6 420 aaPredicted RBP11.85□□□□□ -0.51
USP44-202ENST00000393091 B3GAT1Q9P2W7 334 aa11.85□□□□□ -0.51
USP44-202ENST00000393091 AURKCQ9UQB9 309 aa11.85□□□□□ -0.51
USP44-202ENST00000393091 MS4A18H0YCH9 400 aa11.85□□□□□ -0.51
USP44-202ENST00000393091 H3BML4 177 aa11.85□□□□□ -0.51
USP44-202ENST00000393091 ENPP1P22413 925 aa11.85□□□□□ -0.51
USP44-202ENST00000393091 MS4A18Q3C1V0 323 aa11.85□□□□□ -0.51
USP44-202ENST00000393091 PXKQ7Z7A4 578 aa11.85□□□□□ -0.51
USP44-202ENST00000393091 ZER1Q7Z7L7 766 aa11.85□□□□□ -0.51
USP44-202ENST00000393091 ZHX1-C8orf76Q96EF9 292 aa11.85□□□□□ -0.51
USP44-202ENST00000393091 RASSF4Q9H2L5 321 aa11.85□□□□□ -0.51
USP44-202ENST00000393091 C20orf141Q9NUB4 165 aa11.85□□□□□ -0.51
USP44-202ENST00000393091 TMCC3Q9ULS5 477 aa11.85□□□□□ -0.51
USP44-202ENST00000393091 RCE1Q9Y256 329 aa11.85□□□□□ -0.51
USP44-202ENST00000393091 TESMINQ9Y4I5 508 aa11.85□□□□□ -0.51
USP44-202ENST00000393091 SULT2B1O00204 365 aa11.85□□□□□ -0.51
USP44-202ENST00000393091 MAKP20794 623 aa11.85□□□□□ -0.51
USP44-202ENST00000393091 HSF1Q00613 529 aa11.85□□□□□ -0.51
USP44-202ENST00000393091 TLE1Q04724 770 aa11.85□□□□□ -0.51
USP44-202ENST00000393091 SLC17A1Q14916 467 aa11.85□□□□□ -0.51
USP44-202ENST00000393091 TOMM20Q15388 145 aa11.85□□□□□ -0.51
USP44-202ENST00000393091 KDM4DQ6B0I6 523 aa11.85□□□□□ -0.51
USP44-202ENST00000393091 PFN4Q8NHR9 129 aa11.85□□□□□ -0.51
USP44-202ENST00000393091 GIPC3Q8TF64 312 aa11.85□□□□□ -0.51
USP44-202ENST00000393091 ADAD1Q96M93 576 aaKnown RBP11.85□□□□□ -0.51
USP44-202ENST00000393091 OXGR1Q96P68 337 aa11.85□□□□□ -0.51
USP44-202ENST00000393091 TAS2R5Q9NYW4 299 aa11.85□□□□□ -0.51
USP44-202ENST00000393091 LUZP4Q9P127 313 aa11.85□□□□□ -0.51
USP44-202ENST00000393091 KLHL13Q9P2N7 655 aa11.85□□□□□ -0.51
USP44-202ENST00000393091 REV1Q9UBZ9 1251 aa11.85□□□□□ -0.51
USP44-202ENST00000393091 MCTS1Q9ULC4 181 aaKnown RBP11.85□□□□□ -0.51
USP44-202ENST00000393091 ENO4A6NNW6 628 aa11.84□□□□□ -0.51
USP44-202ENST00000393091 H0YJX3 145 aa11.84□□□□□ -0.51
USP44-202ENST00000393091 TIPRLO75663 272 aa11.84□□□□□ -0.51
USP44-202ENST00000393091 GLI4P10075 376 aa11.84□□□□□ -0.51
USP44-202ENST00000393091 STARP49675 285 aa11.84□□□□□ -0.51
USP44-202ENST00000393091 PRPS1P60891 318 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms