RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 WNT11O96014 354 aa13.8□□□□□ -0.2
CCDC50-201ENST00000392455 KCNE1P15382 129 aa13.8□□□□□ -0.2
CCDC50-201ENST00000392455 CRHBPP24387 322 aa13.8□□□□□ -0.2
CCDC50-201ENST00000392455 ARG2P78540 354 aa13.8□□□□□ -0.2
CCDC50-201ENST00000392455 SELPLGQ14242 412 aa13.8□□□□□ -0.2
CCDC50-201ENST00000392455 B3GNTL1Q67FW5 361 aaPredicted RBP13.8□□□□□ -0.2
CCDC50-201ENST00000392455 PLBD1Q6P4A8 553 aa13.8□□□□□ -0.2
CCDC50-201ENST00000392455 SLC24A4Q8NFF2 622 aa13.8□□□□□ -0.2
CCDC50-201ENST00000392455 ARHGAP39Q9C0H5 1083 aa13.8□□□□□ -0.2
CCDC50-201ENST00000392455 EPHX3Q9H6B9 360 aa13.8□□□□□ -0.2
CCDC50-201ENST00000392455 RHBDD3Q9Y3P4 386 aa13.8□□□□□ -0.2
CCDC50-201ENST00000392455 SULT2B1O00204 365 aa13.8□□□□□ -0.2
CCDC50-201ENST00000392455 JTBO76095 146 aa13.8□□□□□ -0.2
CCDC50-201ENST00000392455 GPR4P46093 362 aa13.8□□□□□ -0.2
CCDC50-201ENST00000392455 TMPRSS11FQ6ZWK6 438 aa13.8□□□□□ -0.2
CCDC50-201ENST00000392455 CNIH3Q8TBE1 160 aa13.8□□□□□ -0.2
CCDC50-201ENST00000392455 OR7D2Q96RA2 312 aa13.8□□□□□ -0.2
CCDC50-201ENST00000392455 RANBP9Q96S59 729 aa13.8□□□□□ -0.2
CCDC50-201ENST00000392455 SNU13P55769 128 aaKnown RBP13.8□□□□□ -0.2
CCDC50-201ENST00000392455 KRTCAP2Q8N6L1 136 aa13.8□□□□□ -0.2
CCDC50-201ENST00000392455 E5RGE8 158 aa13.8□□□□□ -0.2
CCDC50-201ENST00000392455 ARAFP10398 606 aa13.8□□□□□ -0.2
CCDC50-201ENST00000392455 SELEP16581 610 aa13.8□□□□□ -0.2
CCDC50-201ENST00000392455 KDM4DQ6B0I6 523 aa13.8□□□□□ -0.2
CCDC50-201ENST00000392455 YIPF5Q969M3 257 aa13.8□□□□□ -0.2
CCDC50-201ENST00000392455 SMOQ99835 787 aa13.8□□□□□ -0.2
CCDC50-201ENST00000392455 EGLN3Q9H6Z9 239 aa13.8□□□□□ -0.2
CCDC50-201ENST00000392455 CA14Q9ULX7 337 aa13.8□□□□□ -0.2
CCDC50-201ENST00000392455 KPTNQ9Y664 436 aa13.8□□□□□ -0.2
CCDC50-201ENST00000392455 ENPP4Q9Y6X5 453 aa13.8□□□□□ -0.2
CCDC50-201ENST00000392455 TEX50A0A1B0GTY4 177 aa13.8□□□□□ -0.2
CCDC50-201ENST00000392455 A0A1W2PPK0 400 aa13.8□□□□□ -0.2
CCDC50-201ENST00000392455 PRSS44E7EML9 344 aa13.8□□□□□ -0.2
CCDC50-201ENST00000392455 HNRNPA3P51991 378 aaKnown RBP13.8□□□□□ -0.2
CCDC50-201ENST00000392455 GALNT1Q10472 559 aaPredicted RBP13.8□□□□□ -0.2
CCDC50-201ENST00000392455 CDCA2Q69YH5 1023 aaPredicted RBP13.8□□□□□ -0.2
CCDC50-201ENST00000392455 HMGN2P46Q86SG4 172 aa13.8□□□□□ -0.2
CCDC50-201ENST00000392455 SLC51BQ86UW2 128 aa13.8□□□□□ -0.2
CCDC50-201ENST00000392455 EXOSC3Q9NQT5 275 aaKnown RBP13.8□□□□□ -0.2
CCDC50-201ENST00000392455 INCA1Q0VD86 236 aa13.8□□□□□ -0.2
CCDC50-201ENST00000392455 NNATQ16517 81 aa13.8□□□□□ -0.2
CCDC50-201ENST00000392455 PPP1R3AQ16821 1122 aa13.8□□□□□ -0.2
CCDC50-201ENST00000392455 RPL7L1Q6DKI1 246 aaKnown RBP13.8□□□□□ -0.2
CCDC50-201ENST00000392455 ADIPOR2Q86V24 386 aa13.8□□□□□ -0.2
CCDC50-201ENST00000392455 OR52N2Q8NGI0 321 aa13.8□□□□□ -0.2
CCDC50-201ENST00000392455 OR5B3Q8NH48 314 aa13.8□□□□□ -0.2
CCDC50-201ENST00000392455 KCNG3Q8TAE7 436 aa13.8□□□□□ -0.2
CCDC50-201ENST00000392455 GNPNAT1Q96EK6 184 aaPredicted RBP13.8□□□□□ -0.2
CCDC50-201ENST00000392455 C20orf85Q9H1P6 137 aa13.8□□□□□ -0.2
CCDC50-201ENST00000392455 PLEKHF2Q9H8W4 249 aa13.8□□□□□ -0.2
CCDC50-201ENST00000392455 GNG12Q9UBI6 72 aa13.8□□□□□ -0.2
CCDC50-201ENST00000392455 ST8SIA5O15466 376 aa13.8□□□□□ -0.2
CCDC50-201ENST00000392455 HSD17B1P14061 328 aa13.8□□□□□ -0.2
CCDC50-201ENST00000392455 TRA2BP62995 288 aaKnown RBP13.8□□□□□ -0.2
CCDC50-201ENST00000392455 TIMD4Q96H15 378 aa13.8□□□□□ -0.2
CCDC50-201ENST00000392455 ZNF281Q9Y2X9 895 aa13.8□□□□□ -0.2
CCDC50-201ENST00000392455 NID2Q14112 1375 aa13.79□□□□□ -0.2
CCDC50-201ENST00000392455 H3BMQ9 156 aa13.79□□□□□ -0.2
CCDC50-201ENST00000392455 TNFRSF10AO00220 468 aa13.79□□□□□ -0.2
CCDC50-201ENST00000392455 LY86O95711 162 aa13.79□□□□□ -0.2
CCDC50-201ENST00000392455 CPN1P15169 458 aa13.79□□□□□ -0.2
CCDC50-201ENST00000392455 GABRA5P31644 462 aa13.79□□□□□ -0.2
CCDC50-201ENST00000392455 CA5AP35218 305 aa13.79□□□□□ -0.2
CCDC50-201ENST00000392455 ZNF718Q3SXZ3 478 aa13.79□□□□□ -0.2
CCDC50-201ENST00000392455 RNF212Q495C1 297 aa13.79□□□□□ -0.2
CCDC50-201ENST00000392455 HBMQ6B0K9 141 aa13.79□□□□□ -0.2
CCDC50-201ENST00000392455 SLC38A6Q8IZM9 456 aa13.79□□□□□ -0.2
CCDC50-201ENST00000392455 RIMS4Q9H426 269 aaPredicted RBP13.79□□□□□ -0.2
CCDC50-201ENST00000392455 DCAF16Q9NXF7 216 aa13.79□□□□□ -0.2
CCDC50-201ENST00000392455 PURGQ9UJV8 347 aaKnown RBP13.79□□□□□ -0.2
CCDC50-201ENST00000392455 PIK3C2AO00443 1686 aa13.79□□□□□ -0.2
CCDC50-201ENST00000392455 ZNF587BE7ETH6 402 aa13.79□□□□□ -0.2
CCDC50-201ENST00000392455 ARPC1BO15143 372 aaKnown RBP13.79□□□□□ -0.2
CCDC50-201ENST00000392455 SPI1P17947 270 aa13.79□□□□□ -0.2
CCDC50-201ENST00000392455 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.79□□□□□ -0.2
CCDC50-201ENST00000392455 SLC6A18Q96N87 628 aa13.79□□□□□ -0.2
CCDC50-201ENST00000392455 LYSMD1Q96S90 227 aa13.79□□□□□ -0.2
CCDC50-201ENST00000392455 C8orf33Q9H7E9 229 aaPredicted RBP13.79□□□□□ -0.2
CCDC50-201ENST00000392455 OR14J1Q9UGF5 321 aa13.79□□□□□ -0.2
CCDC50-201ENST00000392455 ABCC6O95255 1503 aa13.79□□□□□ -0.2
CCDC50-201ENST00000392455 ABCA1O95477 2261 aa13.79□□□□□ -0.2
CCDC50-201ENST00000392455 PRAMEF27A3QJZ7 478 aa13.79□□□□□ -0.2
CCDC50-201ENST00000392455 YIF1AO95070 293 aa13.79□□□□□ -0.2
CCDC50-201ENST00000392455 CNIH1O95406 144 aa13.79□□□□□ -0.2
CCDC50-201ENST00000392455 STSP08842 583 aa13.79□□□□□ -0.2
CCDC50-201ENST00000392455 PRAMEF9Q5VWM5 478 aa13.79□□□□□ -0.2
CCDC50-201ENST00000392455 BLOC1S3Q6QNY0 202 aa13.79□□□□□ -0.2
CCDC50-201ENST00000392455 SRRQ9GZT4 340 aa13.79□□□□□ -0.2
CCDC50-201ENST00000392455 ZNF732B4DXR9 585 aa13.79□□□□□ -0.2
CCDC50-201ENST00000392455 ACKR3P25106 362 aa13.79□□□□□ -0.2
CCDC50-201ENST00000392455 VIPR2P41587 438 aa13.79□□□□□ -0.2
CCDC50-201ENST00000392455 SHEQ5VZ18 495 aa13.79□□□□□ -0.2
CCDC50-201ENST00000392455 LCN10Q6JVE6 187 aa13.79□□□□□ -0.2
CCDC50-201ENST00000392455 C14orf80Q86SX3 495 aa13.79□□□□□ -0.2
CCDC50-201ENST00000392455 OR52H1Q8NGJ2 320 aa13.79□□□□□ -0.2
CCDC50-201ENST00000392455 CMTM3Q96MX0 182 aa13.79□□□□□ -0.2
CCDC50-201ENST00000392455 SYNPO2LQ9H987 977 aa13.79□□□□□ -0.2
CCDC50-201ENST00000392455 MEIOCA2RUB1 952 aa13.79□□□□□ -0.2
CCDC50-201ENST00000392455 WBP2NLQ6ICG8 309 aa13.79□□□□□ -0.2
CCDC50-201ENST00000392455 BLNKQ8WV28 456 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms