RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 PIGMQ9H3S5 423 aa6.05□□□□□ -1.44
UBBP1-201ENST00000392399 CHST11Q9NPF2 352 aa6.05□□□□□ -1.44
UBBP1-201ENST00000392399 KCNJ16Q9NPI9 418 aa6.05□□□□□ -1.44
UBBP1-201ENST00000392399 Q9UFV3 132 aa6.05□□□□□ -1.44
UBBP1-201ENST00000392399 RIMS3Q9UJD0 308 aa6.05□□□□□ -1.44
UBBP1-201ENST00000392399 FOXD3Q9UJU5 478 aaPredicted RBP6.05□□□□□ -1.44
UBBP1-201ENST00000392399 PACSIN3Q9UKS6 424 aa6.05□□□□□ -1.44
UBBP1-201ENST00000392399 EMC9Q9Y3B6 208 aa6.05□□□□□ -1.44
UBBP1-201ENST00000392399 FAM32AQ9Y421 112 aaKnown RBP6.05□□□□□ -1.44
UBBP1-201ENST00000392399 NCOA6Q14686 2063 aaPredicted RBP6.05□□□□□ -1.44
UBBP1-201ENST00000392399 FLNBO75369 2602 aaKnown RBP6.04□□□□□ -1.44
UBBP1-201ENST00000392399 UTP20O75691 2785 aaKnown RBP6.04□□□□□ -1.44
UBBP1-201ENST00000392399 IGKV3D-15A0A087WSY6 115 aa6.04□□□□□ -1.44
UBBP1-201ENST00000392399 LOC102725191A0A1B0GVB3 256 aa6.04□□□□□ -1.44
UBBP1-201ENST00000392399 A0A1W2PNV4 684 aa6.04□□□□□ -1.44
UBBP1-201ENST00000392399 ZC3H12DA2A288 527 aaKnown RBP6.04□□□□□ -1.44
UBBP1-201ENST00000392399 LIPT2A6NK58 231 aa6.04□□□□□ -1.44
UBBP1-201ENST00000392399 AQP12BA6NM10 295 aa6.04□□□□□ -1.44
UBBP1-201ENST00000392399 ZNF724A8MTY0 619 aa6.04□□□□□ -1.44
UBBP1-201ENST00000392399 KDM4EB2RXH2 506 aaPredicted RBP6.04□□□□□ -1.44
UBBP1-201ENST00000392399 H0YHG0 523 aa6.04□□□□□ -1.44
UBBP1-201ENST00000392399 MSTNO14793 375 aa6.04□□□□□ -1.44
UBBP1-201ENST00000392399 SMAD9O15198 467 aaKnown RBP6.04□□□□□ -1.44
UBBP1-201ENST00000392399 MGRN1O60291 552 aa6.04□□□□□ -1.44
UBBP1-201ENST00000392399 SS18L1O75177 396 aaPredicted RBP6.04□□□□□ -1.44
UBBP1-201ENST00000392399 AQP8O94778 261 aa6.04□□□□□ -1.44
UBBP1-201ENST00000392399 MT-ATP6P00846 226 aa6.04□□□□□ -1.44
UBBP1-201ENST00000392399 THY1P04216 161 aa6.04□□□□□ -1.44
UBBP1-201ENST00000392399 YES1P07947 543 aa6.04□□□□□ -1.44
UBBP1-201ENST00000392399 CD8BP10966 210 aa6.04□□□□□ -1.44
UBBP1-201ENST00000392399 UMPSP11172 480 aa6.04□□□□□ -1.44
UBBP1-201ENST00000392399 IMPDH2P12268 514 aa6.04□□□□□ -1.44
UBBP1-201ENST00000392399 RHCEP18577 417 aa6.04□□□□□ -1.44
UBBP1-201ENST00000392399 FPR1P21462 350 aa6.04□□□□□ -1.44
UBBP1-201ENST00000392399 GTF2E2P29084 291 aaKnown RBP6.04□□□□□ -1.44
UBBP1-201ENST00000392399 PEX19P40855 299 aa6.04□□□□□ -1.44
UBBP1-201ENST00000392399 CTBP2P56545 445 aa6.04□□□□□ -1.44
UBBP1-201ENST00000392399 SMIM11AP58511 58 aa6.04□□□□□ -1.44
UBBP1-201ENST00000392399 EGR4Q05215 589 aa6.04□□□□□ -1.44
UBBP1-201ENST00000392399 RASGEF1BQ0VAM2 473 aa6.04□□□□□ -1.44
UBBP1-201ENST00000392399 PIN1Q13526 163 aaPredicted RBP6.04□□□□□ -1.44
UBBP1-201ENST00000392399 GUSBP1Q15486 140 aa6.04□□□□□ -1.44
UBBP1-201ENST00000392399 FBXL19-AS1Q494R0 122 aa6.04□□□□□ -1.44
UBBP1-201ENST00000392399 TMEM201Q5SNT2 666 aa6.04□□□□□ -1.44
UBBP1-201ENST00000392399 TMEM225Q6GV28 225 aa6.04□□□□□ -1.44
UBBP1-201ENST00000392399 PPP4R4Q6NUP7 873 aa6.04□□□□□ -1.44
UBBP1-201ENST00000392399 DEF8Q6ZN54 512 aa6.04□□□□□ -1.44
UBBP1-201ENST00000392399 GDF7Q7Z4P5 450 aa6.04□□□□□ -1.44
UBBP1-201ENST00000392399 CCDC71Q8IV32 467 aaPredicted RBP6.04□□□□□ -1.44
UBBP1-201ENST00000392399 AQP12AQ8IXF9 295 aa6.04□□□□□ -1.44
UBBP1-201ENST00000392399 RNF113BQ8IZP6 322 aaKnown RBP6.04□□□□□ -1.44
UBBP1-201ENST00000392399 OFCC1Q8IZS5 231 aa6.04□□□□□ -1.44
UBBP1-201ENST00000392399 NAXEQ8NCW5 288 aa6.04□□□□□ -1.44
UBBP1-201ENST00000392399 OR6K3Q8NGY3 331 aa6.04□□□□□ -1.44
UBBP1-201ENST00000392399 PIGXQ8TBF5 258 aa6.04□□□□□ -1.44
UBBP1-201ENST00000392399 RNF217Q8TC41 542 aa6.04□□□□□ -1.44
UBBP1-201ENST00000392399 ROBO4Q8WZ75 1007 aa6.04□□□□□ -1.44
UBBP1-201ENST00000392399 INTS12Q96CB8 462 aaKnown RBP6.04□□□□□ -1.44
UBBP1-201ENST00000392399 KTI12Q96EK9 354 aaPredicted RBP6.04□□□□□ -1.44
UBBP1-201ENST00000392399 HSH2DQ96JZ2 352 aa6.04□□□□□ -1.44
UBBP1-201ENST00000392399 C7orf34Q96L11 122 aa6.04□□□□□ -1.44
UBBP1-201ENST00000392399 PRRC1Q96M27 445 aa6.04□□□□□ -1.44
UBBP1-201ENST00000392399 LRGUKQ96M69 825 aa6.04□□□□□ -1.44
UBBP1-201ENST00000392399 PSMG3-AS1Q96PY0 264 aa6.04□□□□□ -1.44
UBBP1-201ENST00000392399 ZNF347Q96SE7 839 aa6.04□□□□□ -1.44
UBBP1-201ENST00000392399 USB1Q9BQ65 265 aaKnown RBP6.04□□□□□ -1.44
UBBP1-201ENST00000392399 ZNF426Q9BUY5 554 aa6.04□□□□□ -1.44
UBBP1-201ENST00000392399 SF3B5Q9BWJ5 86 aaKnown RBP6.04□□□□□ -1.44
UBBP1-201ENST00000392399 CADM1Q9BY67 442 aaKnown RBP6.04□□□□□ -1.44
UBBP1-201ENST00000392399 SRXN1Q9BYN0 137 aa6.04□□□□□ -1.44
UBBP1-201ENST00000392399 TRIM15Q9C019 465 aa6.04□□□□□ -1.44
UBBP1-201ENST00000392399 ANKRD19PQ9H560 264 aa6.04□□□□□ -1.44
UBBP1-201ENST00000392399 BCO1Q9HAY6 547 aa6.04□□□□□ -1.44
UBBP1-201ENST00000392399 SLC24A3Q9HC58 644 aa6.04□□□□□ -1.44
UBBP1-201ENST00000392399 IL1RAPQ9NPH3 570 aa6.04□□□□□ -1.44
UBBP1-201ENST00000392399 FANCFQ9NPI8 374 aa6.04□□□□□ -1.44
UBBP1-201ENST00000392399 PLSCR4Q9NRQ2 329 aa6.04□□□□□ -1.44
UBBP1-201ENST00000392399 PARPBPQ9NWS1 579 aa6.04□□□□□ -1.44
UBBP1-201ENST00000392399 EMC3Q9P0I2 261 aa6.04□□□□□ -1.44
UBBP1-201ENST00000392399 SLC7A7Q9UM01 511 aa6.04□□□□□ -1.44
UBBP1-201ENST00000392399 A4GNTQ9UNA3 340 aa6.04□□□□□ -1.44
UBBP1-201ENST00000392399 B3GALT5Q9Y2C3 310 aa6.04□□□□□ -1.44
UBBP1-201ENST00000392399 CORINQ9Y5Q5 1042 aa6.04□□□□□ -1.44
UBBP1-201ENST00000392399 ENPP4Q9Y6X5 453 aa6.04□□□□□ -1.44
UBBP1-201ENST00000392399 PTPN13Q12923 2485 aa6.03□□□□□ -1.44
UBBP1-201ENST00000392399 CENPEQ02224 2701 aa6.03□□□□□ -1.44
UBBP1-201ENST00000392399 IGKV1D-42A0A075B6H8 117 aa6.03□□□□□ -1.44
UBBP1-201ENST00000392399 A0A1W2PRQ8 180 aa6.03□□□□□ -1.44
UBBP1-201ENST00000392399 AQP7P3A6NL99 342 aa6.03□□□□□ -1.44
UBBP1-201ENST00000392399 A8MXE2 369 aa6.03□□□□□ -1.44
UBBP1-201ENST00000392399 FTCDNL1E5RQL4 147 aa6.03□□□□□ -1.44
UBBP1-201ENST00000392399 ACOT8O14734 319 aa6.03□□□□□ -1.44
UBBP1-201ENST00000392399 TNFSF13O75888 250 aa6.03□□□□□ -1.44
UBBP1-201ENST00000392399 LYPD3O95274 346 aa6.03□□□□□ -1.44
UBBP1-201ENST00000392399 CNOT4O95628 575 aaKnown RBP6.03□□□□□ -1.44
UBBP1-201ENST00000392399 AVPP01185 164 aa6.03□□□□□ -1.44
UBBP1-201ENST00000392399 MT-ND1P03886 318 aa6.03□□□□□ -1.44
UBBP1-201ENST00000392399 TNFRSF1BP20333 461 aa6.03□□□□□ -1.44
UBBP1-201ENST00000392399 BMP5P22003 454 aa6.03□□□□□ -1.44
UBBP1-201ENST00000392399 KIR2DL2P43627 348 aaPredicted RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms