RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 SORDQ00796 357 aa13.39□□□□□ -0.27
IGHV3-53-201ENST00000390627 MFSD13AQ14CX5 517 aa13.39□□□□□ -0.27
IGHV3-53-201ENST00000390627 FXNQ16595 210 aa13.39□□□□□ -0.27
IGHV3-53-201ENST00000390627 OTUD3Q5T2D3 398 aaPredicted RBP13.39□□□□□ -0.27
IGHV3-53-201ENST00000390627 HIST2H2BCQ6DN03 193 aa13.39□□□□□ -0.27
IGHV3-53-201ENST00000390627 MEX3BQ6ZN04 569 aaKnown RBP13.39□□□□□ -0.27
IGHV3-53-201ENST00000390627 FKBP9P1Q75LS8 142 aa13.39□□□□□ -0.27
IGHV3-53-201ENST00000390627 VTCN1Q7Z7D3 282 aa13.39□□□□□ -0.27
IGHV3-53-201ENST00000390627 FAM156AQ8NDB6 213 aa13.39□□□□□ -0.27
IGHV3-53-201ENST00000390627 KTI12Q96EK9 354 aaPredicted RBP13.39□□□□□ -0.27
IGHV3-53-201ENST00000390627 SLC41A3Q96GZ6 507 aa13.39□□□□□ -0.27
IGHV3-53-201ENST00000390627 PTDSS2Q9BVG9 487 aa13.39□□□□□ -0.27
IGHV3-53-201ENST00000390627 OPN3Q9H1Y3 402 aaPredicted RBP13.39□□□□□ -0.27
IGHV3-53-201ENST00000390627 C1orf21Q9H246 121 aa13.39□□□□□ -0.27
IGHV3-53-201ENST00000390627 GORASP2Q9H8Y8 452 aa13.39□□□□□ -0.27
IGHV3-53-201ENST00000390627 FANCFQ9NPI8 374 aa13.39□□□□□ -0.27
IGHV3-53-201ENST00000390627 PLSCR4Q9NRQ2 329 aa13.39□□□□□ -0.27
IGHV3-53-201ENST00000390627 GALNT8Q9NY28 637 aa13.39□□□□□ -0.27
IGHV3-53-201ENST00000390627 SLC7A7Q9UM01 511 aa13.39□□□□□ -0.27
IGHV3-53-201ENST00000390627 SAMD4AQ9UPU9 718 aaKnown RBP13.39□□□□□ -0.27
IGHV3-53-201ENST00000390627 SNX13Q9Y5W8 968 aa13.39□□□□□ -0.27
IGHV3-53-201ENST00000390627 MPDZO75970 2070 aa13.38□□□□□ -0.27
IGHV3-53-201ENST00000390627 AQP7P3A6NL99 342 aa13.38□□□□□ -0.27
IGHV3-53-201ENST00000390627 UBOX5O94941 541 aa13.38□□□□□ -0.27
IGHV3-53-201ENST00000390627 AKR7A3O95154 331 aa13.38□□□□□ -0.27
IGHV3-53-201ENST00000390627 THRBP10828 461 aa13.38□□□□□ -0.27
IGHV3-53-201ENST00000390627 PCYT1AP49585 367 aa13.38□□□□□ -0.27
IGHV3-53-201ENST00000390627 SLC16A1P53985 500 aa13.38□□□□□ -0.27
IGHV3-53-201ENST00000390627 TTC33Q6PID6 262 aaPredicted RBP13.38□□□□□ -0.27
IGHV3-53-201ENST00000390627 RINLQ6ZS11 566 aa13.38□□□□□ -0.27
IGHV3-53-201ENST00000390627 LSRQ86X29 649 aaPredicted RBP13.38□□□□□ -0.27
IGHV3-53-201ENST00000390627 CCDC103Q8IW40 242 aa13.38□□□□□ -0.27
IGHV3-53-201ENST00000390627 DMRTC2Q8IXT2 367 aaPredicted RBP13.38□□□□□ -0.27
IGHV3-53-201ENST00000390627 ZNF610Q8N9Z0 462 aa13.38□□□□□ -0.27
IGHV3-53-201ENST00000390627 OR6S1Q8NH40 331 aa13.38□□□□□ -0.27
IGHV3-53-201ENST00000390627 SLC25A36Q96CQ1 311 aa13.38□□□□□ -0.27
IGHV3-53-201ENST00000390627 HSH2DQ96JZ2 352 aa13.38□□□□□ -0.27
IGHV3-53-201ENST00000390627 PRRC1Q96M27 445 aa13.38□□□□□ -0.27
IGHV3-53-201ENST00000390627 ZNF300Q96RE9 604 aaPredicted RBP13.38□□□□□ -0.27
IGHV3-53-201ENST00000390627 C12orf49Q9H741 205 aa13.38□□□□□ -0.27
IGHV3-53-201ENST00000390627 DCAF13Q9NV06 445 aaKnown RBP13.38□□□□□ -0.27
IGHV3-53-201ENST00000390627 ELOVL5Q9NYP7 299 aa13.38□□□□□ -0.27
IGHV3-53-201ENST00000390627 C6orf203Q9P0P8 240 aaPredicted RBP13.38□□□□□ -0.27
IGHV3-53-201ENST00000390627 ING1Q9UK53 422 aaPredicted RBP13.38□□□□□ -0.27
IGHV3-53-201ENST00000390627 PRPF19Q9UMS4 504 aaKnown RBP13.38□□□□□ -0.27
IGHV3-53-201ENST00000390627 ZNF716A6NP11 495 aa13.37□□□□□ -0.27
IGHV3-53-201ENST00000390627 ZNF814B7Z6K7 855 aa13.37□□□□□ -0.27
IGHV3-53-201ENST00000390627 FTCDNL1E5RQL4 147 aa13.37□□□□□ -0.27
IGHV3-53-201ENST00000390627 ARPC2O15144 300 aa13.37□□□□□ -0.27
IGHV3-53-201ENST00000390627 FZD7O75084 574 aa13.37□□□□□ -0.27
IGHV3-53-201ENST00000390627 VAMP5O95183 116 aa13.37□□□□□ -0.27
IGHV3-53-201ENST00000390627 THY1P04216 161 aa13.37□□□□□ -0.27
IGHV3-53-201ENST00000390627 POU2F1P14859 743 aa13.37□□□□□ -0.27
IGHV3-53-201ENST00000390627 ST3GAL3Q11203 375 aa13.37□□□□□ -0.27
IGHV3-53-201ENST00000390627 ZNF787Q6DD87 383 aa13.37□□□□□ -0.27
IGHV3-53-201ENST00000390627 TFAP2EQ6VUC0 442 aa13.37□□□□□ -0.27
IGHV3-53-201ENST00000390627 LINC00114Q6XXX2 140 aa13.37□□□□□ -0.27
IGHV3-53-201ENST00000390627 BEND4Q6ZU67 534 aa13.37□□□□□ -0.27
IGHV3-53-201ENST00000390627 NUFIP2Q7Z417 695 aaKnown RBP13.37□□□□□ -0.27
IGHV3-53-201ENST00000390627 GDF7Q7Z4P5 450 aa13.37□□□□□ -0.27
IGHV3-53-201ENST00000390627 GALNT5Q7Z7M9 940 aa13.37□□□□□ -0.27
IGHV3-53-201ENST00000390627 TSPYL5Q86VY4 417 aaPredicted RBP13.37□□□□□ -0.27
IGHV3-53-201ENST00000390627 P3H2Q8IVL5 708 aa13.37□□□□□ -0.27
IGHV3-53-201ENST00000390627 TMEM99Q8N816 258 aa13.37□□□□□ -0.27
IGHV3-53-201ENST00000390627 TAAR8Q969N4 342 aa13.37□□□□□ -0.27
IGHV3-53-201ENST00000390627 NSMCE2Q96MF7 247 aa13.37□□□□□ -0.27
IGHV3-53-201ENST00000390627 SF3B5Q9BWJ5 86 aaKnown RBP13.37□□□□□ -0.27
IGHV3-53-201ENST00000390627 SLC19A3Q9BZV2 496 aa13.37□□□□□ -0.27
IGHV3-53-201ENST00000390627 MUC13Q9H3R2 512 aa13.37□□□□□ -0.27
IGHV3-53-201ENST00000390627 RIMS3Q9UJD0 308 aa13.37□□□□□ -0.27
IGHV3-53-201ENST00000390627 RASD1Q9Y272 281 aa13.37□□□□□ -0.27
IGHV3-53-201ENST00000390627 NOSIPQ9Y314 301 aaKnown RBP13.37□□□□□ -0.27
IGHV3-53-201ENST00000390627 CORINQ9Y5Q5 1042 aa13.37□□□□□ -0.27
IGHV3-53-201ENST00000390627 HECTD1Q9ULT8 2610 aa13.37□□□□□ -0.27
IGHV3-53-201ENST00000390627 RAMP1O60894 148 aa13.36□□□□□ -0.27
IGHV3-53-201ENST00000390627 LYPD3O95274 346 aa13.36□□□□□ -0.27
IGHV3-53-201ENST00000390627 CD79BP40259 229 aa13.36□□□□□ -0.27
IGHV3-53-201ENST00000390627 RBM34P42696 430 aaKnown RBP13.36□□□□□ -0.27
IGHV3-53-201ENST00000390627 PIN1Q13526 163 aaPredicted RBP13.36□□□□□ -0.27
IGHV3-53-201ENST00000390627 SLC17A1Q14916 467 aa13.36□□□□□ -0.27
IGHV3-53-201ENST00000390627 DNAL1Q4LDG9 190 aa13.36□□□□□ -0.27
IGHV3-53-201ENST00000390627 TMEM225Q6GV28 225 aa13.36□□□□□ -0.27
IGHV3-53-201ENST00000390627 ZNF474Q6S9Z5 364 aaPredicted RBP13.36□□□□□ -0.27
IGHV3-53-201ENST00000390627 WDR88Q6ZMY6 472 aa13.36□□□□□ -0.27
IGHV3-53-201ENST00000390627 CYP4Z1Q86W10 505 aa13.36□□□□□ -0.27
IGHV3-53-201ENST00000390627 C10orf53Q8N6V4 93 aa13.36□□□□□ -0.27
IGHV3-53-201ENST00000390627 MARVELD3Q96A59 401 aa13.36□□□□□ -0.27
IGHV3-53-201ENST00000390627 ZNF426Q9BUY5 554 aa13.36□□□□□ -0.27
IGHV3-53-201ENST00000390627 ASPNQ9BXN1 380 aa13.36□□□□□ -0.27
IGHV3-53-201ENST00000390627 AMBRA1Q9C0C7 1298 aa13.36□□□□□ -0.27
IGHV3-53-201ENST00000390627 TAS2R1Q9NYW7 299 aa13.36□□□□□ -0.27
IGHV3-53-201ENST00000390627 B3GALT5Q9Y2C3 310 aa13.36□□□□□ -0.27
IGHV3-53-201ENST00000390627 ASH1LQ9NR48 2969 aaKnown RBP13.35□□□□□ -0.27
IGHV3-53-201ENST00000390627 M0R082 166 aa13.35□□□□□ -0.27
IGHV3-53-201ENST00000390627 MT-ATP6P00846 226 aa13.35□□□□□ -0.27
IGHV3-53-201ENST00000390627 PTNP21246 168 aa13.35□□□□□ -0.27
IGHV3-53-201ENST00000390627 GRPRP30550 384 aa13.35□□□□□ -0.27
IGHV3-53-201ENST00000390627 MSX2P35548 267 aaPredicted RBP13.35□□□□□ -0.27
IGHV3-53-201ENST00000390627 KIR2DL3P43628 341 aa13.35□□□□□ -0.27
IGHV3-53-201ENST00000390627 OR3A2P47893 321 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms