RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 SNX33Q8WV41 574 aa7.56□□□□□ -1.2
PTPRR-203ENST00000378778 BPIFA2Q96DR5 249 aa7.56□□□□□ -1.2
PTPRR-203ENST00000378778 CNRIP1Q96F85 164 aaPredicted RBP7.56□□□□□ -1.2
PTPRR-203ENST00000378778 NARS2Q96I59 477 aaKnown RBP7.56□□□□□ -1.2
PTPRR-203ENST00000378778 ZNF681Q96N22 645 aa7.56□□□□□ -1.2
PTPRR-203ENST00000378778 CCNL2Q96S94 520 aaPredicted RBP7.56□□□□□ -1.2
PTPRR-203ENST00000378778 TBX5Q99593 518 aa7.56□□□□□ -1.2
PTPRR-203ENST00000378778 GINS4Q9BRT9 223 aa7.56□□□□□ -1.2
PTPRR-203ENST00000378778 PDCD10Q9BUL8 212 aa7.56□□□□□ -1.2
PTPRR-203ENST00000378778 DPH1Q9BZG8 443 aa7.56□□□□□ -1.2
PTPRR-203ENST00000378778 APMAPQ9HDC9 416 aa7.56□□□□□ -1.2
PTPRR-203ENST00000378778 TAS2R3Q9NYW6 316 aa7.56□□□□□ -1.2
PTPRR-203ENST00000378778 NOSIPQ9Y314 301 aaKnown RBP7.56□□□□□ -1.2
PTPRR-203ENST00000378778 AK6Q9Y3D8 172 aaKnown RBP7.56□□□□□ -1.2
PTPRR-203ENST00000378778 MCIDASD6RGH6 385 aa7.55□□□□□ -1.2
PTPRR-203ENST00000378778 LGALS8O00214 317 aa7.55□□□□□ -1.2
PTPRR-203ENST00000378778 AGRPO00253 132 aa7.55□□□□□ -1.2
PTPRR-203ENST00000378778 PAK4O96013 591 aaPredicted RBP7.55□□□□□ -1.2
PTPRR-203ENST00000378778 ZNF35P13682 527 aa7.55□□□□□ -1.2
PTPRR-203ENST00000378778 NID1P14543 1247 aa7.55□□□□□ -1.2
PTPRR-203ENST00000378778 RPL17P18621 184 aaKnown RBP7.55□□□□□ -1.2
PTPRR-203ENST00000378778 ANXA7P20073 488 aaKnown RBP7.55□□□□□ -1.2
PTPRR-203ENST00000378778 POU3F2P20265 443 aaPredicted RBP7.55□□□□□ -1.2
PTPRR-203ENST00000378778 MAKP20794 623 aa7.55□□□□□ -1.2
PTPRR-203ENST00000378778 HTR2AP28223 471 aa7.55□□□□□ -1.2
PTPRR-203ENST00000378778 DIO1P49895 249 aa7.55□□□□□ -1.2
PTPRR-203ENST00000378778 STXBP1P61764 594 aaKnown RBP7.55□□□□□ -1.2
PTPRR-203ENST00000378778 DCDP81605 110 aaKnown RBP7.55□□□□□ -1.2
PTPRR-203ENST00000378778 OR1Q1Q15612 314 aa7.55□□□□□ -1.2
PTPRR-203ENST00000378778 TMEM52BQ4KMG9 183 aa7.55□□□□□ -1.2
PTPRR-203ENST00000378778 RNASE12Q5GAN4 147 aaKnown RBP7.55□□□□□ -1.2
PTPRR-203ENST00000378778 VWA2Q5GFL6 755 aa7.55□□□□□ -1.2
PTPRR-203ENST00000378778 GLT8D1Q68CQ7 371 aa7.55□□□□□ -1.2
PTPRR-203ENST00000378778 ELP2Q6IA86 826 aa7.55□□□□□ -1.2
PTPRR-203ENST00000378778 C3orf33Q6P1S2 294 aa7.55□□□□□ -1.2
PTPRR-203ENST00000378778 WDR88Q6ZMY6 472 aa7.55□□□□□ -1.2
PTPRR-203ENST00000378778 ADIPOR2Q86V24 386 aa7.55□□□□□ -1.2
PTPRR-203ENST00000378778 CMTM8Q8IZV2 173 aa7.55□□□□□ -1.2
PTPRR-203ENST00000378778 OR2L13Q8N349 312 aa7.55□□□□□ -1.2
PTPRR-203ENST00000378778 DTX3Q8N9I9 347 aa7.55□□□□□ -1.2
PTPRR-203ENST00000378778 SLC35A4Q96G79 324 aa7.55□□□□□ -1.2
PTPRR-203ENST00000378778 C16orf58Q96GQ5 468 aa7.55□□□□□ -1.2
PTPRR-203ENST00000378778 DERL3Q96Q80 235 aa7.55□□□□□ -1.2
PTPRR-203ENST00000378778 STACQ99469 402 aa7.55□□□□□ -1.2
PTPRR-203ENST00000378778 MS4A7Q9GZW8 240 aaPredicted RBP7.55□□□□□ -1.2
PTPRR-203ENST00000378778 ZNF350Q9GZX5 532 aa7.55□□□□□ -1.2
PTPRR-203ENST00000378778 SAV1Q9H4B6 383 aaPredicted RBP7.55□□□□□ -1.2
PTPRR-203ENST00000378778 BEX1Q9HBH7 125 aa7.55□□□□□ -1.2
PTPRR-203ENST00000378778 TMEM27Q9HBJ8 222 aa7.55□□□□□ -1.2
PTPRR-203ENST00000378778 PRDM7Q9NQW5 492 aa7.55□□□□□ -1.2
PTPRR-203ENST00000378778 C5AR2Q9P296 337 aa7.55□□□□□ -1.2
PTPRR-203ENST00000378778 A0A0A6YYH2 397 aa7.55□□□□□ -1.2
PTPRR-203ENST00000378778 A0A1W2PR48 441 aa7.55□□□□□ -1.2
PTPRR-203ENST00000378778 GXYLT2A0PJZ3 443 aa7.55□□□□□ -1.2
PTPRR-203ENST00000378778 GLTPD2A6NH11 291 aa7.55□□□□□ -1.2
PTPRR-203ENST00000378778 A6NJ64 397 aa7.55□□□□□ -1.2
PTPRR-203ENST00000378778 PYCARD-AS1I3L0S3 204 aa7.55□□□□□ -1.2
PTPRR-203ENST00000378778 IGF2P01344 180 aa7.55□□□□□ -1.2
PTPRR-203ENST00000378778 SMIM6P0DI80 62 aa7.55□□□□□ -1.2
PTPRR-203ENST00000378778 LAMP2P13473 410 aa7.55□□□□□ -1.2
PTPRR-203ENST00000378778 FOLR2P14207 255 aa7.55□□□□□ -1.2
PTPRR-203ENST00000378778 MEOX2P50222 304 aa7.55□□□□□ -1.2
PTPRR-203ENST00000378778 DEFA5Q01523 94 aa7.55□□□□□ -1.2
PTPRR-203ENST00000378778 NAAAQ02083 359 aa7.55□□□□□ -1.2
PTPRR-203ENST00000378778 PON3Q15166 354 aa7.55□□□□□ -1.2
PTPRR-203ENST00000378778 PAN3Q58A45 887 aaKnown RBP7.55□□□□□ -1.2
PTPRR-203ENST00000378778 TMEM255AQ5JRV8 349 aa7.55□□□□□ -1.2
PTPRR-203ENST00000378778 FCRLAQ7L513 359 aa7.55□□□□□ -1.2
PTPRR-203ENST00000378778 NDUFAF7Q7L592 441 aa7.55□□□□□ -1.2
PTPRR-203ENST00000378778 ZNF227Q86WZ6 799 aa7.55□□□□□ -1.2
PTPRR-203ENST00000378778 DND1Q8IYX4 353 aaKnown RBP7.55□□□□□ -1.2
PTPRR-203ENST00000378778 BMPERQ8N8U9 685 aa7.55□□□□□ -1.2
PTPRR-203ENST00000378778 ZNF417Q8TAU3 575 aa7.55□□□□□ -1.2
PTPRR-203ENST00000378778 TNFAIP8L1Q8WVP5 186 aa7.55□□□□□ -1.2
PTPRR-203ENST00000378778 MS4A6EQ96DS6 147 aa7.55□□□□□ -1.2
PTPRR-203ENST00000378778 MRGPRX3Q96LB0 322 aa7.55□□□□□ -1.2
PTPRR-203ENST00000378778 C12orf57Q99622 126 aa7.55□□□□□ -1.2
PTPRR-203ENST00000378778 TCEAL7Q9BRU2 100 aa7.55□□□□□ -1.2
PTPRR-203ENST00000378778 MENTQ9BUN1 341 aa7.55□□□□□ -1.2
PTPRR-203ENST00000378778 LGR4Q9BXB1 951 aa7.55□□□□□ -1.2
PTPRR-203ENST00000378778 HCAR1Q9BXC0 346 aa7.55□□□□□ -1.2
PTPRR-203ENST00000378778 POTEKPQ9BYX7 375 aa7.55□□□□□ -1.2
PTPRR-203ENST00000378778 OR51V1Q9H2C8 321 aa7.55□□□□□ -1.2
PTPRR-203ENST00000378778 MED20Q9H944 212 aa7.55□□□□□ -1.2
PTPRR-203ENST00000378778 NOX4Q9NPH5 578 aa7.55□□□□□ -1.2
PTPRR-203ENST00000378778 TMEM138Q9NPI0 162 aa7.55□□□□□ -1.2
PTPRR-203ENST00000378778 NCDNQ9UBB6 729 aa7.55□□□□□ -1.2
PTPRR-203ENST00000378778 OR5V1Q9UGF6 321 aa7.55□□□□□ -1.2
PTPRR-203ENST00000378778 NUP210LQ5VU65 1888 aa7.55□□□□□ -1.2
PTPRR-203ENST00000378778 TRBV5-5A0A0J9YX44 114 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 A0A1W2PPV9 198 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 TMEM218A2RU14 115 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 RNF222A6NCQ9 220 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 LRRC72A6NJI9 287 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 ARPC3O15145 178 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 TGM5O43548 720 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 ZNF254O75437 659 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 ERAL1O75616 437 aaKnown RBP7.54□□□□□ -1.2
PTPRR-203ENST00000378778 KDM4BO94953 1096 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 AIFM1O95831 613 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms