RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 SLC6A18Q96N87 628 aa14.33□□□□□ -0.12
FXN-201ENST00000377270 IMP3Q9NV31 184 aaKnown RBP14.33□□□□□ -0.12
FXN-201ENST00000377270 PCYT1BQ9Y5K3 369 aaPredicted RBP14.33□□□□□ -0.12
FXN-201ENST00000377270 ALPK3Q96L96 1907 aa14.33□□□□□ -0.12
FXN-201ENST00000377270 J3KTA2 159 aa14.32□□□□□ -0.12
FXN-201ENST00000377270 KLK1P06870 262 aa14.32□□□□□ -0.12
FXN-201ENST00000377270 LINC00614P0C842 121 aa14.32□□□□□ -0.12
FXN-201ENST00000377270 CD46P15529 392 aa14.32□□□□□ -0.12
FXN-201ENST00000377270 CDK6Q00534 326 aa14.32□□□□□ -0.12
FXN-201ENST00000377270 COX20Q5RI15 118 aa14.32□□□□□ -0.12
FXN-201ENST00000377270 UQCC3Q6UW78 93 aa14.32□□□□□ -0.12
FXN-201ENST00000377270 TMPRSS11FQ6ZWK6 438 aa14.32□□□□□ -0.12
FXN-201ENST00000377270 ERN2Q76MJ5 926 aaKnown RBP14.32□□□□□ -0.12
FXN-201ENST00000377270 CXorf40AQ8TE69 158 aa14.32□□□□□ -0.12
FXN-201ENST00000377270 C16orf78Q8WTQ4 265 aa14.32□□□□□ -0.12
FXN-201ENST00000377270 CXorf40BQ96DE9 158 aa14.32□□□□□ -0.12
FXN-201ENST00000377270 TMEM208Q9BTX3 173 aa14.32□□□□□ -0.12
FXN-201ENST00000377270 SLC38A1Q9H2H9 487 aa14.32□□□□□ -0.12
FXN-201ENST00000377270 DPEP2Q9H4A9 486 aa14.32□□□□□ -0.12
FXN-201ENST00000377270 THSD1Q9NS62 852 aa14.32□□□□□ -0.12
FXN-201ENST00000377270 GPR34Q9UPC5 381 aa14.32□□□□□ -0.12
FXN-201ENST00000377270 SF3B6Q9Y3B4 125 aaKnown RBP14.32□□□□□ -0.12
FXN-201ENST00000377270 TBC1D3BA6NDS4 549 aa14.32□□□□□ -0.12
FXN-201ENST00000377270 PRAMEF25A6NGN4 478 aa14.32□□□□□ -0.12
FXN-201ENST00000377270 PIP5K1CO60331 668 aa14.32□□□□□ -0.12
FXN-201ENST00000377270 SMPD2O60906 423 aa14.32□□□□□ -0.12
FXN-201ENST00000377270 ETFAP13804 333 aa14.32□□□□□ -0.12
FXN-201ENST00000377270 IFNGR1P15260 489 aa14.32□□□□□ -0.12
FXN-201ENST00000377270 FOSL2P15408 326 aa14.32□□□□□ -0.12
FXN-201ENST00000377270 RCC1P18754 421 aaPredicted RBP14.32□□□□□ -0.12
FXN-201ENST00000377270 CNR1P21554 472 aa14.32□□□□□ -0.12
FXN-201ENST00000377270 TBXA2RP21731 343 aa14.32□□□□□ -0.12
FXN-201ENST00000377270 HMGA2P52926 109 aa14.32□□□□□ -0.12
FXN-201ENST00000377270 TAS2R50P59544 299 aa14.32□□□□□ -0.12
FXN-201ENST00000377270 EGR3Q06889 387 aa14.32□□□□□ -0.12
FXN-201ENST00000377270 TOMM34Q15785 309 aaPredicted RBP14.32□□□□□ -0.12
FXN-201ENST00000377270 OR5AR1Q8NGP9 310 aa14.32□□□□□ -0.12
FXN-201ENST00000377270 C3orf49Q96BT1 292 aa14.32□□□□□ -0.12
FXN-201ENST00000377270 PPCDCQ96CD2 204 aa14.32□□□□□ -0.12
FXN-201ENST00000377270 ZNF629Q9UEG4 869 aaPredicted RBP14.32□□□□□ -0.12
FXN-201ENST00000377270 C5orf58C9J3I9 102 aa14.31□□□□□ -0.12
FXN-201ENST00000377270 NPIPB9F8W1W9 429 aa14.31□□□□□ -0.12
FXN-201ENST00000377270 HSPA12AO43301 675 aa14.31□□□□□ -0.12
FXN-201ENST00000377270 PRKYO43930 277 aa14.31□□□□□ -0.12
FXN-201ENST00000377270 SLC19A2O60779 497 aa14.31□□□□□ -0.12
FXN-201ENST00000377270 PLGP00747 810 aaPredicted RBP14.31□□□□□ -0.12
FXN-201ENST00000377270 PMP2P02689 132 aa14.31□□□□□ -0.12
FXN-201ENST00000377270 FURINP09958 794 aa14.31□□□□□ -0.12
FXN-201ENST00000377270 FGF9P31371 208 aaPredicted RBP14.31□□□□□ -0.12
FXN-201ENST00000377270 FEN1P39748 380 aaKnown RBP14.31□□□□□ -0.12
FXN-201ENST00000377270 FOXK1P85037 733 aa14.31□□□□□ -0.12
FXN-201ENST00000377270 RSU1Q15404 277 aa14.31□□□□□ -0.12
FXN-201ENST00000377270 FAM189A2Q15884 450 aa14.31□□□□□ -0.12
FXN-201ENST00000377270 TMEM95Q3KNT9 176 aa14.31□□□□□ -0.12
FXN-201ENST00000377270 TMEM52BQ4KMG9 183 aa14.31□□□□□ -0.12
FXN-201ENST00000377270 FAM69AQ5T7M9 428 aa14.31□□□□□ -0.12
FXN-201ENST00000377270 ZNF784Q8NCA9 323 aaPredicted RBP14.31□□□□□ -0.12
FXN-201ENST00000377270 SUSD6Q92537 303 aa14.31□□□□□ -0.12
FXN-201ENST00000377270 RFKQ969G6 155 aa14.31□□□□□ -0.12
FXN-201ENST00000377270 HIST1H2BAQ96A08 127 aa14.31□□□□□ -0.12
FXN-201ENST00000377270 F2RL3Q96RI0 385 aa14.31□□□□□ -0.12
FXN-201ENST00000377270 SLC35A5Q9BS91 424 aa14.31□□□□□ -0.12
FXN-201ENST00000377270 PIGMQ9H3S5 423 aa14.31□□□□□ -0.12
FXN-201ENST00000377270 NMNAT1Q9HAN9 279 aaPredicted RBP14.31□□□□□ -0.12
FXN-201ENST00000377270 GPATCH2Q9NW75 528 aa14.31□□□□□ -0.12
FXN-201ENST00000377270 ACSL6Q9UKU0 697 aa14.31□□□□□ -0.12
FXN-201ENST00000377270 GPR55Q9Y2T6 319 aaPredicted RBP14.31□□□□□ -0.12
FXN-201ENST00000377270 DUXAA6NLW8 204 aa14.31□□□□□ -0.12
FXN-201ENST00000377270 C5orf67F2Z3F1 127 aa14.31□□□□□ -0.12
FXN-201ENST00000377270 LRRTM2O43300 516 aa14.31□□□□□ -0.12
FXN-201ENST00000377270 NSA2O95478 260 aaKnown RBP14.31□□□□□ -0.12
FXN-201ENST00000377270 S100A2P29034 98 aa14.31□□□□□ -0.12
FXN-201ENST00000377270 P2RY2P41231 377 aa14.31□□□□□ -0.12
FXN-201ENST00000377270 SEC61A1P61619 476 aaKnown RBP14.31□□□□□ -0.12
FXN-201ENST00000377270 RBX1P62877 108 aa14.31□□□□□ -0.12
FXN-201ENST00000377270 FABP5Q01469 135 aa14.31□□□□□ -0.12
FXN-201ENST00000377270 HTR4Q13639 388 aa14.31□□□□□ -0.12
FXN-201ENST00000377270 UBAC2Q8NBM4 344 aa14.31□□□□□ -0.12
FXN-201ENST00000377270 SLC39A7Q92504 469 aa14.31□□□□□ -0.12
FXN-201ENST00000377270 C5orf34Q96MH7 638 aa14.31□□□□□ -0.12
FXN-201ENST00000377270 THAP7Q9BT49 309 aaPredicted RBP14.31□□□□□ -0.12
FXN-201ENST00000377270 PIPOXQ9P0Z9 390 aa14.31□□□□□ -0.12
FXN-201ENST00000377270 NDOR1Q9UHB4 597 aa14.31□□□□□ -0.12
FXN-201ENST00000377270 CARHSP1Q9Y2V2 147 aaKnown RBP14.31□□□□□ -0.12
FXN-201ENST00000377270 DSPPQ9NZW4 1301 aa14.31□□□□□ -0.12
FXN-201ENST00000377270 RAB36O95755 333 aa14.3□□□□□ -0.12
FXN-201ENST00000377270 ZNF35P13682 527 aa14.3□□□□□ -0.12
FXN-201ENST00000377270 ABOP16442 354 aa14.3□□□□□ -0.12
FXN-201ENST00000377270 GIFP27352 417 aa14.3□□□□□ -0.12
FXN-201ENST00000377270 SRP9P49458 86 aaKnown RBP14.3□□□□□ -0.12
FXN-201ENST00000377270 MVDP53602 400 aa14.3□□□□□ -0.12
FXN-201ENST00000377270 INPP5JQ15735 1006 aaPredicted RBP14.3□□□□□ -0.12
FXN-201ENST00000377270 PRAMEF14Q5SWL7 426 aa14.3□□□□□ -0.12
FXN-201ENST00000377270 SLC30A6Q6NXT4 461 aa14.3□□□□□ -0.12
FXN-201ENST00000377270 LPCAT3Q6P1A2 487 aa14.3□□□□□ -0.12
FXN-201ENST00000377270 B3GLCTQ6Y288 498 aa14.3□□□□□ -0.12
FXN-201ENST00000377270 BCDIN3DQ7Z5W3 292 aaKnown RBP14.3□□□□□ -0.12
FXN-201ENST00000377270 GPR137CQ8N3F9 429 aa14.3□□□□□ -0.12
FXN-201ENST00000377270 SMARCD2Q92925 531 aa14.3□□□□□ -0.12
FXN-201ENST00000377270 NRTNQ99748 197 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms