RNA–Protein interactions for RNA: ENST00000376610.6

HDAC6-202, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-202ENST00000376610 FKBP7Q9Y680 259 aa16.19■□□□□ 0.18
HDAC6-202ENST00000376610 ZC3H12DA2A288 527 aaKnown RBP16.18■□□□□ 0.18
HDAC6-202ENST00000376610 TMEM247A6NEH6 219 aa16.18■□□□□ 0.18
HDAC6-202ENST00000376610 LIPT2A6NK58 231 aa16.18■□□□□ 0.18
HDAC6-202ENST00000376610 TRPC5OSA6NMA1 111 aa16.18■□□□□ 0.18
HDAC6-202ENST00000376610 RFXANKO14593 260 aa16.18■□□□□ 0.18
HDAC6-202ENST00000376610 AKR7A3O95154 331 aa16.18■□□□□ 0.18
HDAC6-202ENST00000376610 VAMP5O95183 116 aa16.18■□□□□ 0.18
HDAC6-202ENST00000376610 ALDOCP09972 364 aaKnown RBP16.18■□□□□ 0.18
HDAC6-202ENST00000376610 FAM157CP0CG43 387 aa16.18■□□□□ 0.18
HDAC6-202ENST00000376610 PAX7P23759 505 aa16.18■□□□□ 0.18
HDAC6-202ENST00000376610 CDKN2CP42773 168 aa16.18■□□□□ 0.18
HDAC6-202ENST00000376610 BST1Q10588 318 aa16.18■□□□□ 0.18
HDAC6-202ENST00000376610 ZSWIM7Q19AV6 140 aa16.18■□□□□ 0.18
HDAC6-202ENST00000376610 TMEM225Q6GV28 225 aa16.18■□□□□ 0.18
HDAC6-202ENST00000376610 WBP2NLQ6ICG8 309 aa16.18■□□□□ 0.18
HDAC6-202ENST00000376610 CADM2Q8N3J6 435 aa16.18■□□□□ 0.18
HDAC6-202ENST00000376610 TMEM99Q8N816 258 aa16.18■□□□□ 0.18
HDAC6-202ENST00000376610 PROX1Q92786 737 aa16.18■□□□□ 0.18
HDAC6-202ENST00000376610 BEX2Q9BXY8 128 aa16.18■□□□□ 0.18
HDAC6-202ENST00000376610 ADAM19Q9H013 955 aa16.18■□□□□ 0.18
HDAC6-202ENST00000376610 ARMC7Q9H6L4 198 aa16.18■□□□□ 0.18
HDAC6-202ENST00000376610 OBP2BQ9NPH6 170 aa16.18■□□□□ 0.18
HDAC6-202ENST00000376610 TMEM45AQ9NWC5 275 aa16.18■□□□□ 0.18
HDAC6-202ENST00000376610 LPAR3Q9UBY5 353 aa16.18■□□□□ 0.18
HDAC6-202ENST00000376610 A0A096LNT2 108 aa16.17■□□□□ 0.18
HDAC6-202ENST00000376610 CDHR4A6H8M9 788 aa16.17■□□□□ 0.18
HDAC6-202ENST00000376610 OR6C65A6NJZ3 312 aa16.17■□□□□ 0.18
HDAC6-202ENST00000376610 AQP7P3A6NL99 342 aa16.17■□□□□ 0.18
HDAC6-202ENST00000376610 ZNF587BE7ETH6 402 aa16.17■□□□□ 0.18
HDAC6-202ENST00000376610 ATP6V1G2-DDX39BF2Z307 99 aa16.17■□□□□ 0.18
HDAC6-202ENST00000376610 ANP32DO95626 131 aa16.17■□□□□ 0.18
HDAC6-202ENST00000376610 C1QCP02747 245 aa16.17■□□□□ 0.18
HDAC6-202ENST00000376610 IL6P05231 212 aa16.17■□□□□ 0.18
HDAC6-202ENST00000376610 NCF2P19878 526 aaPredicted RBP16.17■□□□□ 0.18
HDAC6-202ENST00000376610 CRISP3P54108 245 aa16.17■□□□□ 0.18
HDAC6-202ENST00000376610 SNRPD2P62316 118 aaKnown RBP16.17■□□□□ 0.18
HDAC6-202ENST00000376610 SLC25A3Q00325 362 aa16.17■□□□□ 0.18
HDAC6-202ENST00000376610 LARS2Q15031 903 aaKnown RBP16.17■□□□□ 0.18
HDAC6-202ENST00000376610 COX20Q5RI15 118 aa16.17■□□□□ 0.18
HDAC6-202ENST00000376610 CYB5R2Q6BCY4 276 aa16.17■□□□□ 0.18
HDAC6-202ENST00000376610 CROCCP2Q86T23 111 aa16.17■□□□□ 0.18
HDAC6-202ENST00000376610 OR52P1PQ8NH57 321 aa16.17■□□□□ 0.18
HDAC6-202ENST00000376610 C10orf105Q8TEF2 133 aa16.17■□□□□ 0.18
HDAC6-202ENST00000376610 FBXO17Q96EF6 278 aa16.17■□□□□ 0.18
HDAC6-202ENST00000376610 AURKBQ96GD4 344 aaPredicted RBP16.17■□□□□ 0.18
HDAC6-202ENST00000376610 RLIMQ9NVW2 624 aa16.17■□□□□ 0.18
HDAC6-202ENST00000376610 TMEM160Q9NX00 188 aa16.17■□□□□ 0.18
HDAC6-202ENST00000376610 ADPRHL2Q9NX46 363 aa16.17■□□□□ 0.18
HDAC6-202ENST00000376610 MOKQ9UQ07 419 aa16.17■□□□□ 0.18
HDAC6-202ENST00000376610 ARFGEF3Q5TH69 2177 aa16.17■□□□□ 0.18
HDAC6-202ENST00000376610 CUBNO60494 3623 aa16.17■□□□□ 0.18
HDAC6-202ENST00000376610 YLPM1P49750 1951 aaKnown RBP16.17■□□□□ 0.18
HDAC6-202ENST00000376610 A0A096LPI6 279 aa16.16■□□□□ 0.18
HDAC6-202ENST00000376610 A8MVM7 634 aa16.16■□□□□ 0.18
HDAC6-202ENST00000376610 SDHDO14521 159 aa16.16■□□□□ 0.18
HDAC6-202ENST00000376610 F12P00748 615 aaPredicted RBP16.16■□□□□ 0.18
HDAC6-202ENST00000376610 GKN3PP0CG01 181 aa16.16■□□□□ 0.18
HDAC6-202ENST00000376610 USF1P22415 310 aaPredicted RBP16.16■□□□□ 0.18
HDAC6-202ENST00000376610 EPHA3P29320 983 aa16.16■□□□□ 0.18
HDAC6-202ENST00000376610 IL12AP29459 219 aa16.16■□□□□ 0.18
HDAC6-202ENST00000376610 CRATP43155 626 aa16.16■□□□□ 0.18
HDAC6-202ENST00000376610 UBE2NP61088 152 aaKnown RBP16.16■□□□□ 0.18
HDAC6-202ENST00000376610 HIKESHIQ53FT3 197 aa16.16■□□□□ 0.18
HDAC6-202ENST00000376610 CEP85LQ5SZL2 805 aa16.16■□□□□ 0.18
HDAC6-202ENST00000376610 NXNQ6DKJ4 435 aa16.16■□□□□ 0.18
HDAC6-202ENST00000376610 ZNF836Q6ZNA1 936 aa16.16■□□□□ 0.18
HDAC6-202ENST00000376610 ZNF385AQ96PM9 386 aaKnown RBP16.16■□□□□ 0.18
HDAC6-202ENST00000376610 RMND5AQ9H871 391 aa16.16■□□□□ 0.18
HDAC6-202ENST00000376610 THUMPD1Q9NXG2 353 aaKnown RBP16.16■□□□□ 0.18
HDAC6-202ENST00000376610 ZNF232Q9UNY5 417 aa16.16■□□□□ 0.18
HDAC6-202ENST00000376610 GPR45Q9Y5Y3 372 aa16.16■□□□□ 0.18
HDAC6-202ENST00000376610 KLF11O14901 512 aa16.15■□□□□ 0.18
HDAC6-202ENST00000376610 HDAC3O15379 428 aa16.15■□□□□ 0.18
HDAC6-202ENST00000376610 CRYAAP02489 173 aa16.15■□□□□ 0.18
HDAC6-202ENST00000376610 BCHEP06276 602 aa16.15■□□□□ 0.18
HDAC6-202ENST00000376610 IDO1P14902 403 aa16.15■□□□□ 0.18
HDAC6-202ENST00000376610 PDLIM4P50479 330 aa16.15■□□□□ 0.18
HDAC6-202ENST00000376610 RNF220Q5VTB9 566 aa16.15■□□□□ 0.18
HDAC6-202ENST00000376610 PRAMEF8Q5VWM4 474 aa16.15■□□□□ 0.18
HDAC6-202ENST00000376610 PRAMEF7Q5VXH5 474 aa16.15■□□□□ 0.18
HDAC6-202ENST00000376610 VRK2Q86Y07 508 aa16.15■□□□□ 0.18
HDAC6-202ENST00000376610 ANKRD42Q8N9B4 389 aa16.15■□□□□ 0.18
HDAC6-202ENST00000376610 ZIC4Q8N9L1 334 aa16.15■□□□□ 0.18
HDAC6-202ENST00000376610 PIMREGQ9BSJ6 248 aa16.15■□□□□ 0.18
HDAC6-202ENST00000376610 SHARPINQ9H0F6 387 aa16.15■□□□□ 0.18
HDAC6-202ENST00000376610 WDR55Q9H6Y2 383 aaPredicted RBP16.15■□□□□ 0.18
HDAC6-202ENST00000376610 MOV10Q9HCE1 1003 aaKnown RBP16.15■□□□□ 0.18
HDAC6-202ENST00000376610 THAP1Q9NVV9 213 aa16.15■□□□□ 0.18
HDAC6-202ENST00000376610 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.15■□□□□ 0.18
HDAC6-202ENST00000376610 ZNF443Q9Y2A4 671 aaPredicted RBP16.15■□□□□ 0.18
HDAC6-202ENST00000376610 V9GYY5 206 aaPredicted RBP16.15■□□□□ 0.18
HDAC6-202ENST00000376610 SLCO1B7G3V0H7 640 aa16.14■□□□□ 0.17
HDAC6-202ENST00000376610 NDUFS8O00217 210 aa16.14■□□□□ 0.17
HDAC6-202ENST00000376610 SLC22A3O75751 556 aa16.14■□□□□ 0.17
HDAC6-202ENST00000376610 GTF2E2P29084 291 aaKnown RBP16.14■□□□□ 0.17
HDAC6-202ENST00000376610 GZMKP49863 264 aa16.14■□□□□ 0.17
HDAC6-202ENST00000376610 DSTNP60981 165 aa16.14■□□□□ 0.17
HDAC6-202ENST00000376610 LSM11P83369 360 aaKnown RBP eCLIP16.14■□□□□ 0.17
HDAC6-202ENST00000376610 BNIP2Q12982 314 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms