RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 PRKNO60260 465 aaPredicted RBP12.83□□□□□ -0.36
MSH5-202ENST00000375740 CELP19835 753 aa12.83□□□□□ -0.36
MSH5-202ENST00000375740 CD1CP29017 333 aa12.83□□□□□ -0.36
MSH5-202ENST00000375740 ATP12AP54707 1039 aa12.83□□□□□ -0.36
MSH5-202ENST00000375740 HSD17B7P56937 341 aa12.83□□□□□ -0.36
MSH5-202ENST00000375740 FUT7Q11130 342 aa12.83□□□□□ -0.36
MSH5-202ENST00000375740 KLHL12Q53G59 568 aa12.83□□□□□ -0.36
MSH5-202ENST00000375740 PRPF38BQ5VTL8 546 aaKnown RBP12.83□□□□□ -0.36
MSH5-202ENST00000375740 TRILQ7L0X0 811 aa12.83□□□□□ -0.36
MSH5-202ENST00000375740 GHDCQ8N2G8 530 aa12.83□□□□□ -0.36
MSH5-202ENST00000375740 BCORP1Q8N888 145 aa12.83□□□□□ -0.36
MSH5-202ENST00000375740 CADM4Q8NFZ8 388 aa12.83□□□□□ -0.36
MSH5-202ENST00000375740 OR4C3Q8NH37 302 aa12.83□□□□□ -0.36
MSH5-202ENST00000375740 OR52N1Q8NH53 320 aa12.83□□□□□ -0.36
MSH5-202ENST00000375740 G6PC3Q9BUM1 346 aa12.83□□□□□ -0.36
MSH5-202ENST00000375740 ISG20L2Q9H9L3 353 aaKnown RBP12.83□□□□□ -0.36
MSH5-202ENST00000375740 TBC1D17Q9HA65 648 aa12.83□□□□□ -0.36
MSH5-202ENST00000375740 MCCC2Q9HCC0 563 aa12.83□□□□□ -0.36
MSH5-202ENST00000375740 OR10H1Q9Y4A9 318 aa12.83□□□□□ -0.36
MSH5-202ENST00000375740 TLCD2A6NGC4 264 aa12.82□□□□□ -0.36
MSH5-202ENST00000375740 GNB5O14775 395 aa12.82□□□□□ -0.36
MSH5-202ENST00000375740 TFPIP10646 304 aa12.82□□□□□ -0.36
MSH5-202ENST00000375740 PAICSP22234 425 aaKnown RBP12.82□□□□□ -0.36
MSH5-202ENST00000375740 GPR176Q14439 515 aa12.82□□□□□ -0.36
MSH5-202ENST00000375740 KCNAB1Q14722 419 aa12.82□□□□□ -0.36
MSH5-202ENST00000375740 OGFOD3Q6PK18 319 aa12.82□□□□□ -0.36
MSH5-202ENST00000375740 CD200R1LQ6Q8B3 271 aa12.82□□□□□ -0.36
MSH5-202ENST00000375740 ZNF322Q6U7Q0 402 aaPredicted RBP12.82□□□□□ -0.36
MSH5-202ENST00000375740 OAFQ86UD1 273 aa12.82□□□□□ -0.36
MSH5-202ENST00000375740 KLBQ86Z14 1044 aa12.82□□□□□ -0.36
MSH5-202ENST00000375740 ZNF615Q8N8J6 731 aa12.82□□□□□ -0.36
MSH5-202ENST00000375740 C7orf57Q8NEG2 295 aa12.82□□□□□ -0.36
MSH5-202ENST00000375740 LINC00052Q96N35 136 aa12.82□□□□□ -0.36
MSH5-202ENST00000375740 MED18Q9BUE0 208 aa12.82□□□□□ -0.36
MSH5-202ENST00000375740 ZNF426Q9BUY5 554 aa12.82□□□□□ -0.36
MSH5-202ENST00000375740 TMED9Q9BVK6 235 aa12.82□□□□□ -0.36
MSH5-202ENST00000375740 JAM3Q9BX67 310 aa12.82□□□□□ -0.36
MSH5-202ENST00000375740 CHRDQ9H2X0 955 aa12.82□□□□□ -0.36
MSH5-202ENST00000375740 CMC2Q9NRP2 79 aa12.82□□□□□ -0.36
MSH5-202ENST00000375740 ING4Q9UNL4 249 aa12.82□□□□□ -0.36
MSH5-202ENST00000375740 GSTK1Q9Y2Q3 226 aa12.82□□□□□ -0.36
MSH5-202ENST00000375740 TRDV1A0A1B0GX56 115 aa12.82□□□□□ -0.36
MSH5-202ENST00000375740 PRR23D1E9PI22 279 aaPredicted RBP12.82□□□□□ -0.36
MSH5-202ENST00000375740 LMO7DNF2Z398 122 aa12.82□□□□□ -0.36
MSH5-202ENST00000375740 REM1O75628 298 aa12.82□□□□□ -0.36
MSH5-202ENST00000375740 PPP1R3DO95685 299 aa12.82□□□□□ -0.36
MSH5-202ENST00000375740 HRGP04196 525 aa12.82□□□□□ -0.36
MSH5-202ENST00000375740 PRR23D2P0DMB1 279 aaPredicted RBP12.82□□□□□ -0.36
MSH5-202ENST00000375740 RRASP10301 218 aa12.82□□□□□ -0.36
MSH5-202ENST00000375740 FGF9P31371 208 aaPredicted RBP12.82□□□□□ -0.36
MSH5-202ENST00000375740 EVX1P49640 407 aa12.82□□□□□ -0.36
MSH5-202ENST00000375740 ZNF81P51508 661 aa12.82□□□□□ -0.36
MSH5-202ENST00000375740 ACSM1Q08AH1 577 aa12.82□□□□□ -0.36
MSH5-202ENST00000375740 TCTE1Q5JU00 501 aa12.82□□□□□ -0.36
MSH5-202ENST00000375740 KIRREL2Q6UWL6 708 aa12.82□□□□□ -0.36
MSH5-202ENST00000375740 LINC00114Q6XXX2 140 aa12.82□□□□□ -0.36
MSH5-202ENST00000375740 CFAP77Q6ZQR2 320 aa12.82□□□□□ -0.36
MSH5-202ENST00000375740 ZNF550Q7Z398 422 aa12.82□□□□□ -0.36
MSH5-202ENST00000375740 ACBD7Q8N6N7 88 aa12.82□□□□□ -0.36
MSH5-202ENST00000375740 TMEM99Q8N816 258 aa12.82□□□□□ -0.36
MSH5-202ENST00000375740 DACT3Q96B18 629 aaPredicted RBP12.82□□□□□ -0.36
MSH5-202ENST00000375740 HSPA12BQ96MM6 686 aa12.82□□□□□ -0.36
MSH5-202ENST00000375740 TBX5Q99593 518 aa12.82□□□□□ -0.36
MSH5-202ENST00000375740 MED28Q9H204 178 aa12.82□□□□□ -0.36
MSH5-202ENST00000375740 OR51V1Q9H2C8 321 aa12.82□□□□□ -0.36
MSH5-202ENST00000375740 RHPN2P1A8MT19 583 aa12.81□□□□□ -0.36
MSH5-202ENST00000375740 ZNF749O43361 778 aa12.81□□□□□ -0.36
MSH5-202ENST00000375740 HYAL3O43820 417 aaPredicted RBP12.81□□□□□ -0.36
MSH5-202ENST00000375740 CFL1P23528 166 aaKnown RBP12.81□□□□□ -0.36
MSH5-202ENST00000375740 RBM34P42696 430 aaKnown RBP12.81□□□□□ -0.36
MSH5-202ENST00000375740 INPP1P49441 399 aa12.81□□□□□ -0.36
MSH5-202ENST00000375740 CSNK1EP49674 416 aaKnown RBP12.81□□□□□ -0.36
MSH5-202ENST00000375740 NXPH1P58417 271 aa12.81□□□□□ -0.36
MSH5-202ENST00000375740 HNRNPKP61978 463 aaKnown RBP eCLIP12.81□□□□□ -0.365e-7■■■□□ 16.1
MSH5-202ENST00000375740 CRYZQ08257 329 aaKnown RBP12.81□□□□□ -0.36
MSH5-202ENST00000375740 FHL1Q13642 323 aa12.81□□□□□ -0.36
MSH5-202ENST00000375740 SF3A2Q15428 464 aaKnown RBP12.81□□□□□ -0.36
MSH5-202ENST00000375740 TUSC1Q2TAM9 212 aa12.81□□□□□ -0.36
MSH5-202ENST00000375740 C14orf28Q4W4Y0 310 aa12.81□□□□□ -0.36
MSH5-202ENST00000375740 ULK3Q6PHR2 472 aa12.81□□□□□ -0.36
MSH5-202ENST00000375740 TMEM91Q6ZNR0 172 aa12.81□□□□□ -0.36
MSH5-202ENST00000375740 OR4C6Q8NH72 309 aa12.81□□□□□ -0.36
MSH5-202ENST00000375740 KISS1RQ969F8 398 aaPredicted RBP12.81□□□□□ -0.36
MSH5-202ENST00000375740 TEAD3Q99594 435 aa12.81□□□□□ -0.36
MSH5-202ENST00000375740 ABCA7Q8IZY2 2146 aa12.81□□□□□ -0.36
MSH5-202ENST00000375740 DVL2O14641 736 aa12.81□□□□□ -0.36
MSH5-202ENST00000375740 CASKO14936 926 aa12.81□□□□□ -0.36
MSH5-202ENST00000375740 CLPSP04118 112 aa12.81□□□□□ -0.36
MSH5-202ENST00000375740 FCER2P06734 321 aa12.81□□□□□ -0.36
MSH5-202ENST00000375740 NOS3P29474 1203 aa12.81□□□□□ -0.36
MSH5-202ENST00000375740 SLC16A1P53985 500 aa12.81□□□□□ -0.36
MSH5-202ENST00000375740 RPS7P62081 194 aaKnown RBP12.81□□□□□ -0.36
MSH5-202ENST00000375740 ANGPT1Q15389 498 aa12.81□□□□□ -0.36
MSH5-202ENST00000375740 SMAD2Q15796 467 aaKnown RBP12.81□□□□□ -0.36
MSH5-202ENST00000375740 CLLU1Q5K131 121 aa12.81□□□□□ -0.36
MSH5-202ENST00000375740 RTL4Q6ZR62 310 aa12.81□□□□□ -0.36
MSH5-202ENST00000375740 CHMP1BQ7LBR1 199 aa12.81□□□□□ -0.36
MSH5-202ENST00000375740 GPALPP1Q8IXQ4 340 aa12.81□□□□□ -0.36
MSH5-202ENST00000375740 LRRC17Q8N6Y2 441 aa12.81□□□□□ -0.36
MSH5-202ENST00000375740 OR52H1Q8NGJ2 320 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms