RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.21□□□□□ -0.13
CCDC40-202ENST00000374876 TGFBR3LH3BV60 316 aa14.21□□□□□ -0.13
CCDC40-202ENST00000374876 KLK10O43240 276 aa14.21□□□□□ -0.13
CCDC40-202ENST00000374876 PTP4A3O75365 173 aa14.21□□□□□ -0.13
CCDC40-202ENST00000374876 CD8BP10966 210 aa14.21□□□□□ -0.13
CCDC40-202ENST00000374876 ZNF3P17036 446 aa14.21□□□□□ -0.13
CCDC40-202ENST00000374876 NOS3P29474 1203 aa14.21□□□□□ -0.13
CCDC40-202ENST00000374876 RBM34P42696 430 aaKnown RBP14.21□□□□□ -0.13
CCDC40-202ENST00000374876 ACAA2P42765 397 aaKnown RBP14.21□□□□□ -0.13
CCDC40-202ENST00000374876 PPP3R1P63098 170 aa14.21□□□□□ -0.13
CCDC40-202ENST00000374876 ERV3-1Q14264 604 aa14.21□□□□□ -0.13
CCDC40-202ENST00000374876 ZNF267Q14586 743 aaPredicted RBP14.21□□□□□ -0.13
CCDC40-202ENST00000374876 IL22RA1Q8N6P7 574 aa14.21□□□□□ -0.13
CCDC40-202ENST00000374876 TMEM99Q8N816 258 aa14.21□□□□□ -0.13
CCDC40-202ENST00000374876 GDPD1Q8N9F7 314 aa14.21□□□□□ -0.13
CCDC40-202ENST00000374876 DNAJA4Q8WW22 397 aaPredicted RBP14.21□□□□□ -0.13
CCDC40-202ENST00000374876 PTP4A1Q93096 173 aa14.21□□□□□ -0.13
CCDC40-202ENST00000374876 ART5Q96L15 291 aa14.21□□□□□ -0.13
CCDC40-202ENST00000374876 NDC1Q9BTX1 674 aa14.21□□□□□ -0.13
CCDC40-202ENST00000374876 OR51V1Q9H2C8 321 aa14.21□□□□□ -0.13
CCDC40-202ENST00000374876 Q9N2J8 555 aa14.21□□□□□ -0.13
CCDC40-202ENST00000374876 COMMD3Q9UBI1 195 aa14.21□□□□□ -0.13
CCDC40-202ENST00000374876 ZMIZ1Q9ULJ6 1067 aa14.21□□□□□ -0.13
CCDC40-202ENST00000374876 BAIAP2Q9UQB8 552 aa14.21□□□□□ -0.13
CCDC40-202ENST00000374876 A0A1W2PQ09 198 aa14.2□□□□□ -0.14
CCDC40-202ENST00000374876 MEN1O00255 615 aa14.2□□□□□ -0.14
CCDC40-202ENST00000374876 FOXS1O43638 330 aa14.2□□□□□ -0.14
CCDC40-202ENST00000374876 PRAMEF2O60811 474 aa14.2□□□□□ -0.14
CCDC40-202ENST00000374876 REM1O75628 298 aa14.2□□□□□ -0.14
CCDC40-202ENST00000374876 GAAP10253 952 aa14.2□□□□□ -0.14
CCDC40-202ENST00000374876 GPR50Q13585 617 aa14.2□□□□□ -0.14
CCDC40-202ENST00000374876 GRM7Q14831 915 aa14.2□□□□□ -0.14
CCDC40-202ENST00000374876 PYDC2Q56P42 97 aa14.2□□□□□ -0.14
CCDC40-202ENST00000374876 RTL4Q6ZR62 310 aa14.2□□□□□ -0.14
CCDC40-202ENST00000374876 ZNF550Q7Z398 422 aa14.2□□□□□ -0.14
CCDC40-202ENST00000374876 VASH2Q86V25 355 aa14.2□□□□□ -0.14
CCDC40-202ENST00000374876 CADM2Q8N3J6 435 aa14.2□□□□□ -0.14
CCDC40-202ENST00000374876 METTL27Q8N6F8 245 aaPredicted RBP14.2□□□□□ -0.14
CCDC40-202ENST00000374876 LSMEM1Q8N8F7 131 aa14.2□□□□□ -0.14
CCDC40-202ENST00000374876 IL17RDQ8NFM7 739 aa14.2□□□□□ -0.14
CCDC40-202ENST00000374876 ADAMTS18Q8TE60 1221 aa14.2□□□□□ -0.14
CCDC40-202ENST00000374876 KISS1RQ969F8 398 aaPredicted RBP14.2□□□□□ -0.14
CCDC40-202ENST00000374876 TEAD3Q99594 435 aa14.2□□□□□ -0.14
CCDC40-202ENST00000374876 G6PC3Q9BUM1 346 aa14.2□□□□□ -0.14
CCDC40-202ENST00000374876 TRIM36Q9NQ86 728 aa14.2□□□□□ -0.14
CCDC40-202ENST00000374876 INPP5EQ9NRR6 644 aa14.2□□□□□ -0.14
CCDC40-202ENST00000374876 INIPQ9NRY2 104 aa14.2□□□□□ -0.14
CCDC40-202ENST00000374876 CUTCQ9NTM9 273 aa14.2□□□□□ -0.14
CCDC40-202ENST00000374876 RPS6KB2Q9UBS0 482 aa14.2□□□□□ -0.14
CCDC40-202ENST00000374876 PADI1Q9ULC6 663 aa14.2□□□□□ -0.14
CCDC40-202ENST00000374876 DTX4Q9Y2E6 619 aa14.2□□□□□ -0.14
CCDC40-202ENST00000374876 LOC101059948A0A1B0GTJ6 334 aa14.2□□□□□ -0.14
CCDC40-202ENST00000374876 LINC00854A0A1B0GVQ3 168 aa14.2□□□□□ -0.14
CCDC40-202ENST00000374876 FITM1A5D6W6 292 aa14.2□□□□□ -0.14
CCDC40-202ENST00000374876 TMEM8BA6NDV4 472 aa14.2□□□□□ -0.14
CCDC40-202ENST00000374876 RNF13O43567 381 aa14.2□□□□□ -0.14
CCDC40-202ENST00000374876 ADAM11O75078 769 aa14.2□□□□□ -0.14
CCDC40-202ENST00000374876 ATP6V1G1O75348 118 aa14.2□□□□□ -0.14
CCDC40-202ENST00000374876 NSA2O95478 260 aaKnown RBP14.2□□□□□ -0.14
CCDC40-202ENST00000374876 PPP1R3DO95685 299 aa14.2□□□□□ -0.14
CCDC40-202ENST00000374876 HK1P19367 917 aa14.2□□□□□ -0.14
CCDC40-202ENST00000374876 GALP22466 123 aa14.2□□□□□ -0.14
CCDC40-202ENST00000374876 ITPKBP27987 946 aa14.2□□□□□ -0.14
CCDC40-202ENST00000374876 PGDP52209 483 aa14.2□□□□□ -0.14
CCDC40-202ENST00000374876 GALEQ14376 348 aa14.2□□□□□ -0.14
CCDC40-202ENST00000374876 INSL4Q14641 139 aa14.2□□□□□ -0.14
CCDC40-202ENST00000374876 TAB1Q15750 504 aa14.2□□□□□ -0.14
CCDC40-202ENST00000374876 ZSWIM7Q19AV6 140 aa14.2□□□□□ -0.14
CCDC40-202ENST00000374876 VASNQ6EMK4 673 aa14.2□□□□□ -0.14
CCDC40-202ENST00000374876 MR1Q95460 341 aa14.2□□□□□ -0.14
CCDC40-202ENST00000374876 FAM210AQ96ND0 272 aa14.2□□□□□ -0.14
CCDC40-202ENST00000374876 TNFRSF13CQ96RJ3 184 aa14.2□□□□□ -0.14
CCDC40-202ENST00000374876 ZNF426Q9BUY5 554 aa14.2□□□□□ -0.14
CCDC40-202ENST00000374876 KCNN2Q9H2S1 579 aa14.2□□□□□ -0.14
CCDC40-202ENST00000374876 MAP1BP46821 2468 aaKnown RBP14.19□□□□□ -0.14
CCDC40-202ENST00000374876 C2orf92A0A1B0GVN3 265 aa14.19□□□□□ -0.14
CCDC40-202ENST00000374876 RRP8O43159 456 aaKnown RBP14.19□□□□□ -0.14
CCDC40-202ENST00000374876 RGS9O75916 674 aaPredicted RBP14.19□□□□□ -0.14
CCDC40-202ENST00000374876 KLK3P07288 261 aaPredicted RBP14.19□□□□□ -0.14
CCDC40-202ENST00000374876 PEPDP12955 493 aa14.19□□□□□ -0.14
CCDC40-202ENST00000374876 SLC6A6P31641 620 aa14.19□□□□□ -0.14
CCDC40-202ENST00000374876 RORAP35398 523 aa14.19□□□□□ -0.14
CCDC40-202ENST00000374876 CASP3P42574 277 aa14.19□□□□□ -0.14
CCDC40-202ENST00000374876 PSMD4P55036 377 aaKnown RBP14.19□□□□□ -0.14
CCDC40-202ENST00000374876 OR2B6P58173 313 aa14.19□□□□□ -0.14
CCDC40-202ENST00000374876 BTG2P78543 158 aa14.19□□□□□ -0.14
CCDC40-202ENST00000374876 IGLV3-21P80748 117 aaPredicted RBP14.19□□□□□ -0.14
CCDC40-202ENST00000374876 CRYZQ08257 329 aaKnown RBP14.19□□□□□ -0.14
CCDC40-202ENST00000374876 FAM53BQ14153 422 aa14.19□□□□□ -0.14
CCDC40-202ENST00000374876 CRMP1Q14194 572 aa14.19□□□□□ -0.14
CCDC40-202ENST00000374876 FGFBP1Q14512 234 aa14.19□□□□□ -0.14
CCDC40-202ENST00000374876 ZNF141Q15928 474 aa14.19□□□□□ -0.14
CCDC40-202ENST00000374876 NNATQ16517 81 aa14.19□□□□□ -0.14
CCDC40-202ENST00000374876 RHBDD2Q6NTF9 364 aa14.19□□□□□ -0.14
CCDC40-202ENST00000374876 ULK3Q6PHR2 472 aa14.19□□□□□ -0.14
CCDC40-202ENST00000374876 NPSR1Q6W5P4 371 aa14.19□□□□□ -0.14
CCDC40-202ENST00000374876 SPACA3Q8IXA5 215 aa14.19□□□□□ -0.14
CCDC40-202ENST00000374876 ESX1Q8N693 406 aa14.19□□□□□ -0.14
CCDC40-202ENST00000374876 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.19□□□□□ -0.14
CCDC40-202ENST00000374876 KIAA1143Q96AT1 154 aaPredicted RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms