RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 TMED4Q7Z7H5 227 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.98□□□□□ -1.61
ATG4A-204ENST00000372246 RTN4RL2Q86UN3 420 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 CDH26Q8IXH8 852 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 SLC44A3Q8N4M1 653 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 LINC01555Q8NAE3 123 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 CLRN3Q8NCR9 226 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 OR51A4Q8NGJ6 313 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 NANPQ8TBE9 248 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 SYNPRQ8TBG9 265 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 PPP1R14AQ96A00 147 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 PELI1Q96FA3 418 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 ZNF578Q96N58 590 aaPredicted RBP4.98□□□□□ -1.61
ATG4A-204ENST00000372246 TNFRSF13CQ96RJ3 184 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 NDC1Q9BTX1 674 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 MS4A8Q9BY19 250 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 SIDT1Q9NXL6 827 aaKnown RBP4.98□□□□□ -1.61
ATG4A-204ENST00000372246 TAS2R3Q9NYW6 316 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 DHCR7Q9UBM7 475 aaKnown RBP4.98□□□□□ -1.61
ATG4A-204ENST00000372246 PRKAG2Q9UGJ0 569 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 KCNE5Q9UJ90 142 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 SLC13A4Q9UKG4 626 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 ICKQ9UPZ9 632 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 TRBV2A0A0J9YWF9 115 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 TSPAN11A1L157 253 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 OR2M5A3KFT3 312 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 OR52A4PA6NMU1 304 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 D6RAR5 112 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 AIPO00170 330 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 FLRT2O43155 660 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 LILRB5O75023 590 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 RP2O75695 350 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 AIFM1O95831 613 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 EOMESO95936 686 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 NGFRP08138 427 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 EDNRAP25101 427 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 PPP2R1BP30154 601 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 PTH2RP49190 550 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 P2RX1P51575 399 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 LUMP51884 338 aaPredicted RBP4.98□□□□□ -1.61
ATG4A-204ENST00000372246 EPHA4P54764 986 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 UBE2IP63279 158 aaKnown RBP4.98□□□□□ -1.61
ATG4A-204ENST00000372246 MAT1AQ00266 395 aaKnown RBP4.98□□□□□ -1.61
ATG4A-204ENST00000372246 FOXK2Q01167 660 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 TGM3Q08188 693 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 LGALS3BPQ08380 585 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 PDSS1Q5T2R2 415 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 SLC8B1Q6J4K2 584 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 TMEM205Q6UW68 189 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 GLDNQ6ZMI3 551 aaPredicted RBP4.98□□□□□ -1.61
ATG4A-204ENST00000372246 PARS2Q7L3T8 475 aaKnown RBP4.98□□□□□ -1.61
ATG4A-204ENST00000372246 OVCH2Q7RTZ1 564 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 TMPRSS9Q7Z410 1059 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 HDDC2Q7Z4H3 204 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 FGD2Q7Z6J4 655 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 PXKQ7Z7A4 578 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 MRGPREQ86SM8 312 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 LRRTM1Q86UE6 522 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 GLB1L2Q8IW92 636 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 CMIPQ8IY22 773 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 PUSL1Q8N0Z8 303 aaKnown RBP4.98□□□□□ -1.61
ATG4A-204ENST00000372246 IL17RCQ8NAC3 791 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 KCT2Q8NC54 265 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 TMEM185AQ8NFB2 350 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 C1orf216Q8TAB5 229 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 ZNF461Q8TAF7 563 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 SMIM4Q8WVI0 70 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 RGP1Q92546 391 aaPredicted RBP4.98□□□□□ -1.61
ATG4A-204ENST00000372246 RFKQ969G6 155 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 RGMAQ96B86 450 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 CXorf40BQ96DE9 158 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 PRSS27Q9BQR3 290 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 SLC46A2Q9BY10 475 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 TINAGL1Q9GZM7 467 aaPredicted RBP4.98□□□□□ -1.61
ATG4A-204ENST00000372246 PITHD1Q9GZP4 211 aaPredicted RBP4.98□□□□□ -1.61
ATG4A-204ENST00000372246 SLC6A17Q9H1V8 727 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 ZNF106Q9H2Y7 1883 aaKnown RBP4.98□□□□□ -1.61
ATG4A-204ENST00000372246 RHBGQ9H310 441 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 CLDND1Q9NY35 253 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 DPP7Q9UHL4 492 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 ST6GALNAC2Q9UJ37 374 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 NPTNQ9Y639 398 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 WNT6Q9Y6F9 365 aa4.98□□□□□ -1.61
ATG4A-204ENST00000372246 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.97□□□□□ -1.61
ATG4A-204ENST00000372246 OR6C68A6NDL8 312 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 H7C1C5 153 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 M0QYG6 137 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 LEFTY2O00292 366 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 BHLHE40O14503 412 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 PLPP2O43688 288 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 MT-ND5P03915 603 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 ATP1B1P05026 303 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 SBK2P0C263 348 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 CPMP14384 443 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 PPP3CBP16298 524 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 ITPKBP27987 946 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 HOXA6P31267 233 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 RPL3P39023 403 aaKnown RBP4.97□□□□□ -1.61
ATG4A-204ENST00000372246 SMIM11AP58511 58 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 TAS2R38P59533 333 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms