RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 SEC14L5O43304 696 aa9.46□□□□□ -0.9
COL5A1-202ENST00000371820 EMC8O43402 210 aa9.46□□□□□ -0.9
COL5A1-202ENST00000371820 PRKNO60260 465 aaPredicted RBP9.46□□□□□ -0.9
COL5A1-202ENST00000371820 ENTPD6O75354 484 aa9.46□□□□□ -0.9
COL5A1-202ENST00000371820 IGKV3-11P04433 115 aa9.46□□□□□ -0.9
COL5A1-202ENST00000371820 P04436 131 aa9.46□□□□□ -0.9
COL5A1-202ENST00000371820 SLC35E2P0CK97 266 aa9.46□□□□□ -0.9
COL5A1-202ENST00000371820 ACP2P11117 423 aa9.46□□□□□ -0.9
COL5A1-202ENST00000371820 CSNK2A2P19784 350 aaPredicted RBP9.46□□□□□ -0.9
COL5A1-202ENST00000371820 FGF9P31371 208 aaPredicted RBP9.46□□□□□ -0.9
COL5A1-202ENST00000371820 TNFSF8P32971 234 aa9.46□□□□□ -0.9
COL5A1-202ENST00000371820 SDC2P34741 201 aa9.46□□□□□ -0.9
COL5A1-202ENST00000371820 SOX3P41225 446 aa9.46□□□□□ -0.9
COL5A1-202ENST00000371820 CDK5Q00535 292 aa9.46□□□□□ -0.9
COL5A1-202ENST00000371820 PLGLB1Q02325 96 aa9.46□□□□□ -0.9
COL5A1-202ENST00000371820 ACSM1Q08AH1 577 aa9.46□□□□□ -0.9
COL5A1-202ENST00000371820 TPBGQ13641 420 aa9.46□□□□□ -0.9
COL5A1-202ENST00000371820 TRAM2Q15035 370 aa9.46□□□□□ -0.9
COL5A1-202ENST00000371820 TRAM1Q15629 374 aa9.46□□□□□ -0.9
COL5A1-202ENST00000371820 NDUFAF5Q5TEU4 345 aa9.46□□□□□ -0.9
COL5A1-202ENST00000371820 AGAP6Q5VW22 663 aa9.46□□□□□ -0.9
COL5A1-202ENST00000371820 SP5Q6BEB4 398 aaPredicted RBP9.46□□□□□ -0.9
COL5A1-202ENST00000371820 MZT2BQ6NZ67 158 aa9.46□□□□□ -0.9
COL5A1-202ENST00000371820 SLC27A4Q6P1M0 643 aa9.46□□□□□ -0.9
COL5A1-202ENST00000371820 CCBE1Q6UXH8 406 aaPredicted RBP9.46□□□□□ -0.9
COL5A1-202ENST00000371820 Q6ZPB1 254 aaPredicted RBP9.46□□□□□ -0.9
COL5A1-202ENST00000371820 OR4N5Q8IXE1 308 aa9.46□□□□□ -0.9
COL5A1-202ENST00000371820 ZFP62Q8NB50 900 aaPredicted RBP9.46□□□□□ -0.9
COL5A1-202ENST00000371820 OR4K14Q8NGD5 310 aa9.46□□□□□ -0.9
COL5A1-202ENST00000371820 TEX47Q8TBZ9 253 aa9.46□□□□□ -0.9
COL5A1-202ENST00000371820 ITLN2Q8WWU7 325 aaPredicted RBP9.46□□□□□ -0.9
COL5A1-202ENST00000371820 ACOT12Q8WYK0 555 aa9.46□□□□□ -0.9
COL5A1-202ENST00000371820 TSSK6Q9BXA6 273 aa9.46□□□□□ -0.9
COL5A1-202ENST00000371820 SLC22A4Q9H015 551 aa9.46□□□□□ -0.9
COL5A1-202ENST00000371820 SMURF1Q9HCE7 757 aa9.46□□□□□ -0.9
COL5A1-202ENST00000371820 AMBNQ9NP70 447 aa9.46□□□□□ -0.9
COL5A1-202ENST00000371820 EXOSC4Q9NPD3 245 aaKnown RBP9.46□□□□□ -0.9
COL5A1-202ENST00000371820 SACM1LQ9NTJ5 587 aa9.46□□□□□ -0.9
COL5A1-202ENST00000371820 H2AFY2Q9P0M6 372 aaPredicted RBP9.46□□□□□ -0.9
COL5A1-202ENST00000371820 AASSQ9UDR5 926 aa9.46□□□□□ -0.9
COL5A1-202ENST00000371820 ERVK-19Q9WJR5 959 aa9.46□□□□□ -0.9
COL5A1-202ENST00000371820 ZNF835Q9Y2P0 537 aa9.46□□□□□ -0.9
COL5A1-202ENST00000371820 CMAHPQ9Y471 501 aa9.46□□□□□ -0.9
COL5A1-202ENST00000371820 KLF2Q9Y5W3 355 aaPredicted RBP9.46□□□□□ -0.9
COL5A1-202ENST00000371820 TEP1Q99973 2627 aaKnown RBP9.46□□□□□ -0.9
COL5A1-202ENST00000371820 OTOGQ6ZRI0 2925 aa9.45□□□□□ -0.9
COL5A1-202ENST00000371820 FBN2P35556 2912 aa9.45□□□□□ -0.9
COL5A1-202ENST00000371820 HMX3A6NHT5 357 aa9.45□□□□□ -0.9
COL5A1-202ENST00000371820 TMEM200CA6NKL6 621 aa9.45□□□□□ -0.9
COL5A1-202ENST00000371820 HMGN4O00479 90 aa9.45□□□□□ -0.9
COL5A1-202ENST00000371820 PRODHO43272 600 aa9.45□□□□□ -0.9
COL5A1-202ENST00000371820 CCNKO75909 580 aa9.45□□□□□ -0.9
COL5A1-202ENST00000371820 IFI6P09912 130 aa9.45□□□□□ -0.9
COL5A1-202ENST00000371820 POU2F1P14859 743 aa9.45□□□□□ -0.9
COL5A1-202ENST00000371820 CD53P19397 219 aa9.45□□□□□ -0.9
COL5A1-202ENST00000371820 GRNP28799 593 aaKnown RBP9.45□□□□□ -0.9
COL5A1-202ENST00000371820 NUDT6P53370 316 aa9.45□□□□□ -0.9
COL5A1-202ENST00000371820 WNT4P56705 351 aa9.45□□□□□ -0.9
COL5A1-202ENST00000371820 OR2B6P58173 313 aa9.45□□□□□ -0.9
COL5A1-202ENST00000371820 GPR85P60893 370 aa9.45□□□□□ -0.9
COL5A1-202ENST00000371820 PPP3R1P63098 170 aa9.45□□□□□ -0.9
COL5A1-202ENST00000371820 TSPAN31Q12999 210 aa9.45□□□□□ -0.9
COL5A1-202ENST00000371820 SELENBP1Q13228 472 aa9.45□□□□□ -0.9
COL5A1-202ENST00000371820 ZNF267Q14586 743 aaPredicted RBP9.45□□□□□ -0.9
COL5A1-202ENST00000371820 GINS1Q14691 196 aa9.45□□□□□ -0.9
COL5A1-202ENST00000371820 GANABQ14697 944 aaKnown RBP9.45□□□□□ -0.9
COL5A1-202ENST00000371820 SNAPC1Q16533 368 aa9.45□□□□□ -0.9
COL5A1-202ENST00000371820 PDZK1Q5T2W1 519 aa9.45□□□□□ -0.9
COL5A1-202ENST00000371820 DDI2Q5TDH0 399 aa9.45□□□□□ -0.9
COL5A1-202ENST00000371820 HLA-DQA1Q5Y7H0 255 aa9.45□□□□□ -0.9
COL5A1-202ENST00000371820 PGBD2Q6P3X8 592 aa9.45□□□□□ -0.9
COL5A1-202ENST00000371820 RASSF6Q6ZTQ3 369 aa9.45□□□□□ -0.9
COL5A1-202ENST00000371820 BTLAQ7Z6A9 289 aa9.45□□□□□ -0.9
COL5A1-202ENST00000371820 SIAH3Q8IW03 269 aa9.45□□□□□ -0.9
COL5A1-202ENST00000371820 MCEMP1Q8IX19 187 aa9.45□□□□□ -0.9
COL5A1-202ENST00000371820 GALNT12Q8IXK2 581 aa9.45□□□□□ -0.9
COL5A1-202ENST00000371820 OR8H2Q8N162 312 aa9.45□□□□□ -0.9
COL5A1-202ENST00000371820 SLC43A2Q8N370 569 aa9.45□□□□□ -0.9
COL5A1-202ENST00000371820 ZNF808Q8N4W9 903 aaPredicted RBP9.45□□□□□ -0.9
COL5A1-202ENST00000371820 OR5AK3PQ8NH89 298 aa9.45□□□□□ -0.9
COL5A1-202ENST00000371820 XAGE5Q8WWM1 108 aa9.45□□□□□ -0.9
COL5A1-202ENST00000371820 UFD1Q92890 307 aa9.45□□□□□ -0.9
COL5A1-202ENST00000371820 TRIM63Q969Q1 353 aa9.45□□□□□ -0.9
COL5A1-202ENST00000371820 CCDC120Q96HB5 630 aa9.45□□□□□ -0.9
COL5A1-202ENST00000371820 OPALINQ96PE5 141 aa9.45□□□□□ -0.9
COL5A1-202ENST00000371820 GAL3ST4Q96RP7 486 aa9.45□□□□□ -0.9
COL5A1-202ENST00000371820 FAM173AQ9BQD7 235 aa9.45□□□□□ -0.9
COL5A1-202ENST00000371820 FUZQ9BT04 418 aa9.45□□□□□ -0.9
COL5A1-202ENST00000371820 CENPOQ9BU64 300 aa9.45□□□□□ -0.9
COL5A1-202ENST00000371820 TSPAN10Q9H1Z9 355 aaPredicted RBP9.45□□□□□ -0.9
COL5A1-202ENST00000371820 TEX10Q9NXF1 929 aaPredicted RBP9.45□□□□□ -0.9
COL5A1-202ENST00000371820 RABL2AQ9UBK7 228 aaPredicted RBP9.45□□□□□ -0.9
COL5A1-202ENST00000371820 SH3BGRL2Q9UJC5 107 aa9.45□□□□□ -0.9
COL5A1-202ENST00000371820 ZNF221Q9UK13 617 aa9.45□□□□□ -0.9
COL5A1-202ENST00000371820 RABL2BQ9UNT1 228 aa9.45□□□□□ -0.9
COL5A1-202ENST00000371820 LSM2Q9Y333 95 aaKnown RBP9.45□□□□□ -0.9
COL5A1-202ENST00000371820 ZNF780BQ9Y6R6 833 aa9.45□□□□□ -0.9
COL5A1-202ENST00000371820 MYO7BQ6PIF6 2116 aa9.44□□□□□ -0.9
COL5A1-202ENST00000371820 PRAMEF25A6NGN4 478 aa9.44□□□□□ -0.9
COL5A1-202ENST00000371820 GLOD5A6NK44 160 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms