RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 ASB17Q8WXJ9 295 aa14.8□□□□□ -0.04
COL17A1-202ENST00000369733 SSX3Q99909 188 aa14.8□□□□□ -0.04
COL17A1-202ENST00000369733 CNTNAP3Q9BZ76 1288 aa14.8□□□□□ -0.04
COL17A1-202ENST00000369733 VASNQ6EMK4 673 aa14.79□□□□□ -0.04
COL17A1-202ENST00000369733 WBP2NLQ6ICG8 309 aa14.79□□□□□ -0.04
COL17A1-202ENST00000369733 ACSM5Q6NUN0 579 aa14.79□□□□□ -0.04
COL17A1-202ENST00000369733 DNAAF1Q8NEP3 725 aa14.79□□□□□ -0.04
COL17A1-202ENST00000369733 DVL3Q92997 716 aaPredicted RBP14.79□□□□□ -0.04
COL17A1-202ENST00000369733 TMEM106AQ96A25 262 aa14.79□□□□□ -0.04
COL17A1-202ENST00000369733 C17orf105B2RV13 164 aa14.79□□□□□ -0.04
COL17A1-202ENST00000369733 KCNK2O95069 426 aa14.79□□□□□ -0.04
COL17A1-202ENST00000369733 GIPP09681 153 aaPredicted RBP14.79□□□□□ -0.04
COL17A1-202ENST00000369733 SRMP19623 302 aa14.79□□□□□ -0.04
COL17A1-202ENST00000369733 KIR2DS3Q14952 304 aa14.79□□□□□ -0.04
COL17A1-202ENST00000369733 NSDHLQ15738 373 aa14.79□□□□□ -0.04
COL17A1-202ENST00000369733 NKG7Q16617 165 aa14.79□□□□□ -0.04
COL17A1-202ENST00000369733 GPR139Q6DWJ6 353 aa14.79□□□□□ -0.04
COL17A1-202ENST00000369733 CCDC190Q86UF4 302 aa14.79□□□□□ -0.04
COL17A1-202ENST00000369733 MARC2Q969Z3 335 aa14.79□□□□□ -0.04
COL17A1-202ENST00000369733 NME7Q9Y5B8 376 aa14.79□□□□□ -0.04
COL17A1-202ENST00000369733 C17orf113A0A1B0GUU1 675 aa14.79□□□□□ -0.04
COL17A1-202ENST00000369733 E9PI62 339 aa14.79□□□□□ -0.04
COL17A1-202ENST00000369733 SULT1B1O43704 296 aa14.79□□□□□ -0.04
COL17A1-202ENST00000369733 CNOT4O95628 575 aaKnown RBP14.79□□□□□ -0.04
COL17A1-202ENST00000369733 KLKB1P03952 638 aa14.79□□□□□ -0.04
COL17A1-202ENST00000369733 IFNGR1P15260 489 aa14.79□□□□□ -0.04
COL17A1-202ENST00000369733 CASRP41180 1078 aa14.79□□□□□ -0.04
COL17A1-202ENST00000369733 EMP2P54851 167 aa14.79□□□□□ -0.04
COL17A1-202ENST00000369733 NTHL1P78549 312 aa14.79□□□□□ -0.04
COL17A1-202ENST00000369733 HHEXQ03014 270 aa14.79□□□□□ -0.04
COL17A1-202ENST00000369733 LTB4RQ15722 352 aa14.79□□□□□ -0.04
COL17A1-202ENST00000369733 MEX3BQ6ZN04 569 aaKnown RBP14.79□□□□□ -0.04
COL17A1-202ENST00000369733 ZNF680Q8NEM1 530 aa14.79□□□□□ -0.04
COL17A1-202ENST00000369733 DNTTIP1Q9H147 329 aa14.79□□□□□ -0.04
COL17A1-202ENST00000369733 SPATA6Q9NWH7 488 aaPredicted RBP14.79□□□□□ -0.04
COL17A1-202ENST00000369733 TMEM269A0A1B0GVZ9 245 aa14.79□□□□□ -0.04
COL17A1-202ENST00000369733 ARRB1P49407 418 aaPredicted RBP14.79□□□□□ -0.04
COL17A1-202ENST00000369733 DGCR2P98153 550 aa14.79□□□□□ -0.04
COL17A1-202ENST00000369733 SERTAD2Q14140 314 aa14.79□□□□□ -0.04
COL17A1-202ENST00000369733 HNRNPA1L2Q32P51 320 aaKnown RBP14.79□□□□□ -0.04
COL17A1-202ENST00000369733 COX15Q7KZN9 410 aa14.79□□□□□ -0.04
COL17A1-202ENST00000369733 EID2Q8N6I1 236 aa14.79□□□□□ -0.04
COL17A1-202ENST00000369733 RADILQ96JH8 1075 aa14.79□□□□□ -0.04
COL17A1-202ENST00000369733 NMNAT3Q96T66 252 aa14.79□□□□□ -0.04
COL17A1-202ENST00000369733 CLSTN3Q9BQT9 956 aa14.79□□□□□ -0.04
COL17A1-202ENST00000369733 R3HDMLQ9H3Y0 253 aa14.79□□□□□ -0.04
COL17A1-202ENST00000369733 ZNF223Q9UK11 482 aaPredicted RBP14.79□□□□□ -0.04
COL17A1-202ENST00000369733 TAF1P21675 1872 aa14.79□□□□□ -0.04
COL17A1-202ENST00000369733 TCRBV21S2A2A0A5A6 115 aa14.79□□□□□ -0.04
COL17A1-202ENST00000369733 DPM1O60762 260 aa14.79□□□□□ -0.04
COL17A1-202ENST00000369733 NPPBP16860 134 aa14.79□□□□□ -0.04
COL17A1-202ENST00000369733 EVX1P49640 407 aa14.79□□□□□ -0.04
COL17A1-202ENST00000369733 SLC7A9P82251 487 aa14.79□□□□□ -0.04
COL17A1-202ENST00000369733 TMEM151BQ8IW70 566 aa14.79□□□□□ -0.04
COL17A1-202ENST00000369733 TCTE3Q8IZS6 198 aa14.79□□□□□ -0.04
COL17A1-202ENST00000369733 RRNAD1Q96FB5 475 aaKnown RBP14.79□□□□□ -0.04
COL17A1-202ENST00000369733 PLAC1Q9HBJ0 212 aa14.79□□□□□ -0.04
COL17A1-202ENST00000369733 ONECUT3O60422 494 aaPredicted RBP14.78□□□□□ -0.04
COL17A1-202ENST00000369733 GABRB1P18505 474 aa14.78□□□□□ -0.04
COL17A1-202ENST00000369733 DEFA6Q01524 100 aa14.78□□□□□ -0.04
COL17A1-202ENST00000369733 EXOSC2Q13868 293 aaKnown RBP14.78□□□□□ -0.04
COL17A1-202ENST00000369733 YIF1BQ5BJH7 314 aa14.78□□□□□ -0.04
COL17A1-202ENST00000369733 EEF1A1P5Q5VTE0 462 aa14.78□□□□□ -0.04
COL17A1-202ENST00000369733 LILRA3Q8N6C8 439 aaPredicted RBP14.78□□□□□ -0.04
COL17A1-202ENST00000369733 LINC01465Q8N7H1 131 aa14.78□□□□□ -0.04
COL17A1-202ENST00000369733 OR2A12Q8NGT7 310 aa14.78□□□□□ -0.04
COL17A1-202ENST00000369733 MALSU1Q96EH3 234 aa14.78□□□□□ -0.04
COL17A1-202ENST00000369733 APOOQ9BUR5 198 aa14.78□□□□□ -0.04
COL17A1-202ENST00000369733 CBLCQ9ULV8 474 aa14.78□□□□□ -0.04
COL17A1-202ENST00000369733 ZNF175Q9Y473 711 aa14.78□□□□□ -0.04
COL17A1-202ENST00000369733 A0A0A6YYC8 382 aaPredicted RBP14.78□□□□□ -0.04
COL17A1-202ENST00000369733 I3L1I5 382 aaPredicted RBP14.78□□□□□ -0.04
COL17A1-202ENST00000369733 KLK3P07288 261 aaPredicted RBP14.78□□□□□ -0.04
COL17A1-202ENST00000369733 CCL5P13501 91 aa14.78□□□□□ -0.04
COL17A1-202ENST00000369733 MAKP20794 623 aa14.78□□□□□ -0.04
COL17A1-202ENST00000369733 HTR2CP28335 458 aa14.78□□□□□ -0.04
COL17A1-202ENST00000369733 REEP5Q00765 189 aa14.78□□□□□ -0.04
COL17A1-202ENST00000369733 PLGLB1Q02325 96 aa14.78□□□□□ -0.04
COL17A1-202ENST00000369733 PLA2G7Q13093 441 aa14.78□□□□□ -0.04
COL17A1-202ENST00000369733 SLC22A6Q4U2R8 563 aa14.78□□□□□ -0.04
COL17A1-202ENST00000369733 PRAMEF8Q5VWM4 474 aa14.78□□□□□ -0.04
COL17A1-202ENST00000369733 PRAMEF7Q5VXH5 474 aa14.78□□□□□ -0.04
COL17A1-202ENST00000369733 AFMIDQ63HM1 303 aa14.78□□□□□ -0.04
COL17A1-202ENST00000369733 FAM122BQ7Z309 247 aa14.78□□□□□ -0.04
COL17A1-202ENST00000369733 PTOV1Q86YD1 416 aa14.78□□□□□ -0.04
COL17A1-202ENST00000369733 SLC19A3Q9BZV2 496 aa14.78□□□□□ -0.04
COL17A1-202ENST00000369733 HCFC1R1Q9NWW0 138 aa14.78□□□□□ -0.04
COL17A1-202ENST00000369733 TAAR2Q9P1P5 351 aa14.78□□□□□ -0.04
COL17A1-202ENST00000369733 TMEFF2Q9UIK5 374 aaPredicted RBP14.78□□□□□ -0.04
COL17A1-202ENST00000369733 FAM221BA6H8Z2 402 aa14.78□□□□□ -0.04
COL17A1-202ENST00000369733 ASPDHA6ND91 283 aa14.78□□□□□ -0.04
COL17A1-202ENST00000369733 SSX4O60224 188 aa14.78□□□□□ -0.04
COL17A1-202ENST00000369733 GPR75O95800 540 aa14.78□□□□□ -0.04
COL17A1-202ENST00000369733 TEAD1P28347 426 aa14.78□□□□□ -0.04
COL17A1-202ENST00000369733 AFF3P51826 1226 aaKnown RBP14.78□□□□□ -0.04
COL17A1-202ENST00000369733 SEC61A1P61619 476 aaKnown RBP14.78□□□□□ -0.04
COL17A1-202ENST00000369733 FABP5Q01469 135 aa14.78□□□□□ -0.04
COL17A1-202ENST00000369733 CD300CQ08708 224 aa14.78□□□□□ -0.04
COL17A1-202ENST00000369733 TDGQ13569 410 aa14.78□□□□□ -0.04
COL17A1-202ENST00000369733 TOR2AQ5JU69 321 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms