RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 SLC38A1Q9H2H9 487 aa9.05□□□□□ -0.96
CLRN3-201ENST00000368671 MOKQ9UQ07 419 aa9.05□□□□□ -0.96
CLRN3-201ENST00000368671 PMF1-BGLAPU3KQ54 211 aa9.05□□□□□ -0.96
CLRN3-201ENST00000368671 CFAP73A6NFT4 308 aa9.04□□□□□ -0.96
CLRN3-201ENST00000368671 CCDC154A6NI56 674 aa9.04□□□□□ -0.96
CLRN3-201ENST00000368671 AGAP5A6NIR3 686 aa9.04□□□□□ -0.96
CLRN3-201ENST00000368671 KLF11O14901 512 aa9.04□□□□□ -0.96
CLRN3-201ENST00000368671 KRT33AO76009 404 aa9.04□□□□□ -0.96
CLRN3-201ENST00000368671 AKR7A3O95154 331 aa9.04□□□□□ -0.96
CLRN3-201ENST00000368671 WNT11O96014 354 aa9.04□□□□□ -0.96
CLRN3-201ENST00000368671 GSNP06396 782 aa9.04□□□□□ -0.96
CLRN3-201ENST00000368671 GPIP06744 558 aa9.04□□□□□ -0.96
CLRN3-201ENST00000368671 CSF3P09919 207 aa9.04□□□□□ -0.96
CLRN3-201ENST00000368671 NR2F1P10589 423 aa9.04□□□□□ -0.96
CLRN3-201ENST00000368671 UQCRBP14927 111 aa9.04□□□□□ -0.96
CLRN3-201ENST00000368671 IL7RP16871 459 aa9.04□□□□□ -0.96
CLRN3-201ENST00000368671 USF1P22415 310 aaPredicted RBP9.04□□□□□ -0.96
CLRN3-201ENST00000368671 MPGP29372 298 aa9.04□□□□□ -0.96
CLRN3-201ENST00000368671 CDKN2CP42773 168 aa9.04□□□□□ -0.96
CLRN3-201ENST00000368671 RPL14P50914 215 aaKnown RBP9.04□□□□□ -0.96
CLRN3-201ENST00000368671 ANXA11P50995 505 aaKnown RBP9.04□□□□□ -0.96
CLRN3-201ENST00000368671 UFM1P61960 85 aa9.04□□□□□ -0.96
CLRN3-201ENST00000368671 TGFBR3Q03167 851 aa9.04□□□□□ -0.96
CLRN3-201ENST00000368671 EPS8Q12929 822 aa9.04□□□□□ -0.96
CLRN3-201ENST00000368671 CEACAM7Q14002 265 aa9.04□□□□□ -0.96
CLRN3-201ENST00000368671 GNA13Q14344 377 aa9.04□□□□□ -0.96
CLRN3-201ENST00000368671 GGTLC2Q14390 218 aa9.04□□□□□ -0.96
CLRN3-201ENST00000368671 CARTPTQ16568 116 aa9.04□□□□□ -0.96
CLRN3-201ENST00000368671 DPY19L1Q2PZI1 675 aa9.04□□□□□ -0.96
CLRN3-201ENST00000368671 HIKESHIQ53FT3 197 aa9.04□□□□□ -0.96
CLRN3-201ENST00000368671 MRPL2Q5T653 305 aaKnown RBP9.04□□□□□ -0.96
CLRN3-201ENST00000368671 PAQR6Q6TCH4 344 aa9.04□□□□□ -0.96
CLRN3-201ENST00000368671 ZNF621Q6ZSS3 439 aa9.04□□□□□ -0.96
CLRN3-201ENST00000368671 IL17RELQ6ZVW7 336 aa9.04□□□□□ -0.96
CLRN3-201ENST00000368671 GPAT4Q86UL3 456 aa9.04□□□□□ -0.96
CLRN3-201ENST00000368671 CMIPQ8IY22 773 aa9.04□□□□□ -0.96
CLRN3-201ENST00000368671 TRIML2Q8N7C3 387 aa9.04□□□□□ -0.96
CLRN3-201ENST00000368671 ARIH2OSQ8N7S6 290 aa9.04□□□□□ -0.96
CLRN3-201ENST00000368671 TMEM99Q8N816 258 aa9.04□□□□□ -0.96
CLRN3-201ENST00000368671 EDARADDQ8WWZ3 215 aa9.04□□□□□ -0.96
CLRN3-201ENST00000368671 PROX1Q92786 737 aa9.04□□□□□ -0.96
CLRN3-201ENST00000368671 C3orf49Q96BT1 292 aa9.04□□□□□ -0.96
CLRN3-201ENST00000368671 TRIM44Q96DX7 344 aaPredicted RBP9.04□□□□□ -0.96
CLRN3-201ENST00000368671 AURKBQ96GD4 344 aaPredicted RBP9.04□□□□□ -0.96
CLRN3-201ENST00000368671 TEX37Q96LM6 180 aa9.04□□□□□ -0.96
CLRN3-201ENST00000368671 CCDC115Q96NT0 180 aa9.04□□□□□ -0.96
CLRN3-201ENST00000368671 ZNF385AQ96PM9 386 aaKnown RBP9.04□□□□□ -0.96
CLRN3-201ENST00000368671 TRNT1Q96Q11 434 aaKnown RBP9.04□□□□□ -0.96
CLRN3-201ENST00000368671 SORT1Q99523 831 aa9.04□□□□□ -0.96
CLRN3-201ENST00000368671 SHARPINQ9H0F6 387 aa9.04□□□□□ -0.96
CLRN3-201ENST00000368671 CHODLQ9H9P2 273 aa9.04□□□□□ -0.96
CLRN3-201ENST00000368671 BTNL2Q9UIR0 455 aa9.04□□□□□ -0.96
CLRN3-201ENST00000368671 FKBP7Q9Y680 259 aa9.04□□□□□ -0.96
CLRN3-201ENST00000368671 YLPM1P49750 1951 aaKnown RBP9.04□□□□□ -0.96
CLRN3-201ENST00000368671 ROS1P08922 2347 aa9.03□□□□□ -0.96
CLRN3-201ENST00000368671 RTTNQ86VV8 2226 aa9.03□□□□□ -0.96
CLRN3-201ENST00000368671 LMX1BO60663 402 aa9.03□□□□□ -0.96
CLRN3-201ENST00000368671 DBIP07108 87 aaKnown RBP9.03□□□□□ -0.96
CLRN3-201ENST00000368671 ALDOCP09972 364 aaKnown RBP9.03□□□□□ -0.96
CLRN3-201ENST00000368671 GKN3PP0CG01 181 aa9.03□□□□□ -0.96
CLRN3-201ENST00000368671 BGNP21810 368 aa9.03□□□□□ -0.96
CLRN3-201ENST00000368671 RPS4Y1P22090 263 aaKnown RBP9.03□□□□□ -0.96
CLRN3-201ENST00000368671 CXCR1P25024 350 aa9.03□□□□□ -0.96
CLRN3-201ENST00000368671 SLC1A3P43003 542 aa9.03□□□□□ -0.96
CLRN3-201ENST00000368671 PDLIM4P50479 330 aa9.03□□□□□ -0.96
CLRN3-201ENST00000368671 BNIP2Q12982 314 aa9.03□□□□□ -0.96
CLRN3-201ENST00000368671 KRT71Q3SY84 523 aa9.03□□□□□ -0.96
CLRN3-201ENST00000368671 COX20Q5RI15 118 aa9.03□□□□□ -0.96
CLRN3-201ENST00000368671 AP1ARQ63HQ0 302 aa9.03□□□□□ -0.96
CLRN3-201ENST00000368671 LRRC74BQ6ZQY2 392 aa9.03□□□□□ -0.96
CLRN3-201ENST00000368671 VRK2Q86Y07 508 aa9.03□□□□□ -0.96
CLRN3-201ENST00000368671 CADM2Q8N3J6 435 aa9.03□□□□□ -0.96
CLRN3-201ENST00000368671 OR9K2Q8NGE7 335 aa9.03□□□□□ -0.96
CLRN3-201ENST00000368671 AENQ8WTP8 325 aaKnown RBP9.03□□□□□ -0.96
CLRN3-201ENST00000368671 TMEM45BQ96B21 275 aa9.03□□□□□ -0.96
CLRN3-201ENST00000368671 ZBTB9Q96C00 473 aa9.03□□□□□ -0.96
CLRN3-201ENST00000368671 SORCS2Q96PQ0 1159 aa9.03□□□□□ -0.96
CLRN3-201ENST00000368671 OR52E6Q96RD3 313 aa9.03□□□□□ -0.96
CLRN3-201ENST00000368671 VRK1Q99986 396 aaPredicted RBP9.03□□□□□ -0.96
CLRN3-201ENST00000368671 KCNS3Q9BQ31 491 aa9.03□□□□□ -0.96
CLRN3-201ENST00000368671 PIMREGQ9BSJ6 248 aa9.03□□□□□ -0.96
CLRN3-201ENST00000368671 TAPBPLQ9BX59 468 aa9.03□□□□□ -0.96
CLRN3-201ENST00000368671 PNPOQ9NVS9 261 aa9.03□□□□□ -0.96
CLRN3-201ENST00000368671 RLIMQ9NVW2 624 aa9.03□□□□□ -0.96
CLRN3-201ENST00000368671 TMEM160Q9NX00 188 aa9.03□□□□□ -0.96
CLRN3-201ENST00000368671 ADPRHL2Q9NX46 363 aa9.03□□□□□ -0.96
CLRN3-201ENST00000368671 LPAR3Q9UBY5 353 aa9.03□□□□□ -0.96
CLRN3-201ENST00000368671 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.03□□□□□ -0.96
CLRN3-201ENST00000368671 IGHV1-18A0A0C4DH31 117 aa9.02□□□□□ -0.97
CLRN3-201ENST00000368671 LIPT2A6NK58 231 aa9.02□□□□□ -0.97
CLRN3-201ENST00000368671 AQP7P3A6NL99 342 aa9.02□□□□□ -0.97
CLRN3-201ENST00000368671 FAAHO00519 579 aa9.02□□□□□ -0.97
CLRN3-201ENST00000368671 BIRC5O15392 142 aa9.02□□□□□ -0.97
CLRN3-201ENST00000368671 RGS16O15492 202 aaPredicted RBP9.02□□□□□ -0.97
CLRN3-201ENST00000368671 LGI1O95970 557 aa9.02□□□□□ -0.97
CLRN3-201ENST00000368671 IGFBP5P24593 272 aa9.02□□□□□ -0.97
CLRN3-201ENST00000368671 IL12AP29459 219 aa9.02□□□□□ -0.97
CLRN3-201ENST00000368671 GZMKP49863 264 aa9.02□□□□□ -0.97
CLRN3-201ENST00000368671 MAP2K6P52564 334 aa9.02□□□□□ -0.97
CLRN3-201ENST00000368671 SNRPD2P62316 118 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms