RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 ZNF24P17028 368 aa7.03□□□□□ -1.28
YBX3-204ENST00000366290 TNNI3P19429 210 aa7.03□□□□□ -1.28
YBX3-204ENST00000366290 NT5EP21589 574 aa7.03□□□□□ -1.28
YBX3-204ENST00000366290 SOX3P41225 446 aa7.03□□□□□ -1.28
YBX3-204ENST00000366290 CA7P43166 264 aa7.03□□□□□ -1.28
YBX3-204ENST00000366290 CDK9P50750 372 aaKnown RBP7.03□□□□□ -1.28
YBX3-204ENST00000366290 DCAF7P61962 342 aa7.03□□□□□ -1.28
YBX3-204ENST00000366290 PMP22Q01453 160 aa7.03□□□□□ -1.28
YBX3-204ENST00000366290 SQLEQ14534 574 aa7.03□□□□□ -1.28
YBX3-204ENST00000366290 EBPQ15125 230 aaKnown RBP7.03□□□□□ -1.28
YBX3-204ENST00000366290 ZNF791Q3KP31 576 aaPredicted RBP7.03□□□□□ -1.28
YBX3-204ENST00000366290 FAM174BQ3ZCQ3 159 aa7.03□□□□□ -1.28
YBX3-204ENST00000366290 TRMT12Q53H54 448 aaKnown RBP7.03□□□□□ -1.28
YBX3-204ENST00000366290 PIK3CD-AS1Q5SR53 167 aa7.03□□□□□ -1.28
YBX3-204ENST00000366290 C6orf10Q5SRN2 563 aa7.03□□□□□ -1.28
YBX3-204ENST00000366290 CPTPQ5TA50 214 aa7.03□□□□□ -1.28
YBX3-204ENST00000366290 OR4F3Q6IEY1 312 aa7.03□□□□□ -1.28
YBX3-204ENST00000366290 HMBOX1Q6NT76 420 aa7.03□□□□□ -1.28
YBX3-204ENST00000366290 OPN5Q6U736 354 aa7.03□□□□□ -1.28
YBX3-204ENST00000366290 GFRALQ6UXV0 394 aa7.03□□□□□ -1.28
YBX3-204ENST00000366290 RTL4Q6ZR62 310 aa7.03□□□□□ -1.28
YBX3-204ENST00000366290 ANKRD13BQ86YJ7 626 aa7.03□□□□□ -1.28
YBX3-204ENST00000366290 CLECL1Q8IZS7 167 aa7.03□□□□□ -1.28
YBX3-204ENST00000366290 FAM9CQ8IZT9 166 aa7.03□□□□□ -1.28
YBX3-204ENST00000366290 FAM185AQ8N0U4 392 aa7.03□□□□□ -1.28
YBX3-204ENST00000366290 CPSF7Q8N684 471 aaKnown RBP7.03□□□□□ -1.28
YBX3-204ENST00000366290 ZNF615Q8N8J6 731 aa7.03□□□□□ -1.28
YBX3-204ENST00000366290 C11orf65Q8NCR3 313 aa7.03□□□□□ -1.28
YBX3-204ENST00000366290 OR7G2Q8NG99 324 aa7.03□□□□□ -1.28
YBX3-204ENST00000366290 OR7G1Q8NGA0 311 aa7.03□□□□□ -1.28
YBX3-204ENST00000366290 PSMA8Q8TAA3 256 aa7.03□□□□□ -1.28
YBX3-204ENST00000366290 ERP27Q96DN0 273 aa7.03□□□□□ -1.28
YBX3-204ENST00000366290 KLHL15Q96M94 604 aa7.03□□□□□ -1.28
YBX3-204ENST00000366290 RILPQ96NA2 401 aa7.03□□□□□ -1.28
YBX3-204ENST00000366290 BBS4Q96RK4 519 aa7.03□□□□□ -1.28
YBX3-204ENST00000366290 CCT8L2Q96SF2 557 aa7.03□□□□□ -1.28
YBX3-204ENST00000366290 NMUR2Q9GZQ4 415 aa7.03□□□□□ -1.28
YBX3-204ENST00000366290 FAM107BQ9H098 131 aa7.03□□□□□ -1.28
YBX3-204ENST00000366290 ANKRA2Q9H9E1 313 aa7.03□□□□□ -1.28
YBX3-204ENST00000366290 NRIP3Q9NQ35 241 aa7.03□□□□□ -1.28
YBX3-204ENST00000366290 SAR1AQ9NR31 198 aa7.03□□□□□ -1.28
YBX3-204ENST00000366290 KLHL1Q9NR64 748 aa7.03□□□□□ -1.28
YBX3-204ENST00000366290 SNTG1Q9NSN8 517 aa7.03□□□□□ -1.28
YBX3-204ENST00000366290 ACSS1Q9NUB1 689 aaPredicted RBP7.03□□□□□ -1.28
YBX3-204ENST00000366290 HPF1Q9NWY4 346 aa7.03□□□□□ -1.28
YBX3-204ENST00000366290 KIAA1456Q9P272 454 aa7.03□□□□□ -1.28
YBX3-204ENST00000366290 SEC14L3Q9UDX4 400 aa7.03□□□□□ -1.28
YBX3-204ENST00000366290 PSME2Q9UL46 239 aa7.03□□□□□ -1.28
YBX3-204ENST00000366290 ERVK-19Q9WJR5 959 aa7.03□□□□□ -1.28
YBX3-204ENST00000366290 ENTPD4Q9Y227 616 aa7.03□□□□□ -1.28
YBX3-204ENST00000366290 ZNF780BQ9Y6R6 833 aa7.03□□□□□ -1.28
YBX3-204ENST00000366290 PCNX3Q9H6A9 2034 aa7.03□□□□□ -1.28
YBX3-204ENST00000366290 A0A0G2JK05 382 aa7.02□□□□□ -1.29
YBX3-204ENST00000366290 FAM157AC9JC47 383 aa7.02□□□□□ -1.29
YBX3-204ENST00000366290 WWP2O00308 870 aa7.02□□□□□ -1.29
YBX3-204ENST00000366290 PLOD2O00469 737 aa7.02□□□□□ -1.29
YBX3-204ENST00000366290 LDLRAD4O15165 306 aa7.02□□□□□ -1.29
YBX3-204ENST00000366290 LRRTM2O43300 516 aa7.02□□□□□ -1.29
YBX3-204ENST00000366290 OR10H2O60403 315 aa7.02□□□□□ -1.29
YBX3-204ENST00000366290 PLOD3O60568 738 aa7.02□□□□□ -1.29
YBX3-204ENST00000366290 SLC19A2O60779 497 aa7.02□□□□□ -1.29
YBX3-204ENST00000366290 SLC22A3O75751 556 aa7.02□□□□□ -1.29
YBX3-204ENST00000366290 PSMG1O95456 288 aa7.02□□□□□ -1.29
YBX3-204ENST00000366290 C6orf47O95873 294 aa7.02□□□□□ -1.29
YBX3-204ENST00000366290 C1QCP02747 245 aa7.02□□□□□ -1.29
YBX3-204ENST00000366290 IFI6P09912 130 aa7.02□□□□□ -1.29
YBX3-204ENST00000366290 PTPN6P29350 595 aa7.02□□□□□ -1.29
YBX3-204ENST00000366290 NTSP30990 170 aa7.02□□□□□ -1.29
YBX3-204ENST00000366290 RPL3P39023 403 aaKnown RBP7.02□□□□□ -1.29
YBX3-204ENST00000366290 DCTP40126 519 aa7.02□□□□□ -1.29
YBX3-204ENST00000366290 NCBP2P52298 156 aaKnown RBP eCLIP7.02□□□□□ -1.29
YBX3-204ENST00000366290 CLNS1AP54105 237 aaKnown RBP7.02□□□□□ -1.29
YBX3-204ENST00000366290 KCNK10P57789 538 aa7.02□□□□□ -1.29
YBX3-204ENST00000366290 HBA1P69905 142 aa7.02□□□□□ -1.29
YBX3-204ENST00000366290 RCAN2Q14206 197 aa7.02□□□□□ -1.29
YBX3-204ENST00000366290 EXOSC7Q15024 291 aaKnown RBP7.02□□□□□ -1.29
YBX3-204ENST00000366290 TBCEQ15813 527 aaPredicted RBP7.02□□□□□ -1.29
YBX3-204ENST00000366290 HYAL4Q2M3T9 481 aa7.02□□□□□ -1.29
YBX3-204ENST00000366290 METTL21CQ5VZV1 264 aa7.02□□□□□ -1.29
YBX3-204ENST00000366290 C16orf47Q6ZP98 133 aaPredicted RBP7.02□□□□□ -1.29
YBX3-204ENST00000366290 ANKRD46Q86W74 232 aa7.02□□□□□ -1.29
YBX3-204ENST00000366290 SAMD14Q8IZD0 417 aaPredicted RBP7.02□□□□□ -1.29
YBX3-204ENST00000366290 OR4N2Q8NGD1 307 aa7.02□□□□□ -1.29
YBX3-204ENST00000366290 PRSS3P2Q8NHM4 247 aa7.02□□□□□ -1.29
YBX3-204ENST00000366290 SLC22A8Q8TCC7 542 aa7.02□□□□□ -1.29
YBX3-204ENST00000366290 PAQR8Q8TEZ7 354 aa7.02□□□□□ -1.29
YBX3-204ENST00000366290 ADIPOR1Q96A54 375 aa7.02□□□□□ -1.29
YBX3-204ENST00000366290 NTNG2Q96CW9 530 aa7.02□□□□□ -1.29
YBX3-204ENST00000366290 SPACA9Q96E40 222 aaPredicted RBP7.02□□□□□ -1.29
YBX3-204ENST00000366290 ZBED6CLQ96FA7 236 aaPredicted RBP7.02□□□□□ -1.29
YBX3-204ENST00000366290 INPP5KQ9BT40 448 aa7.02□□□□□ -1.29
YBX3-204ENST00000366290 WWTR1Q9GZV5 400 aa7.02□□□□□ -1.29
YBX3-204ENST00000366290 NSRP1Q9H0G5 558 aaKnown RBP7.02□□□□□ -1.29
YBX3-204ENST00000366290 ZDHHC11Q9H8X9 412 aa7.02□□□□□ -1.29
YBX3-204ENST00000366290 LIN28AQ9H9Z2 209 aaKnown RBP7.02□□□□□ -1.29
YBX3-204ENST00000366290 PCDHB16Q9NRJ7 776 aa7.02□□□□□ -1.29
YBX3-204ENST00000366290 DEPPQ9NTK1 212 aa7.02□□□□□ -1.29
YBX3-204ENST00000366290 C20orf141Q9NUB4 165 aa7.02□□□□□ -1.29
YBX3-204ENST00000366290 GIMAP4Q9NUV9 329 aa7.02□□□□□ -1.29
YBX3-204ENST00000366290 MSRB1Q9NZV6 116 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms