RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 PAN3Q58A45 887 aaKnown RBP10.18□□□□□ -0.78
CLIP1-203ENST00000361654 SFRP4Q6FHJ7 346 aaPredicted RBP10.18□□□□□ -0.78
CLIP1-203ENST00000361654 DPY19L2P1Q6NXN4 242 aa10.18□□□□□ -0.78
CLIP1-203ENST00000361654 LPCAT3Q6P1A2 487 aa10.18□□□□□ -0.78
CLIP1-203ENST00000361654 SLC22A25Q6T423 547 aa10.18□□□□□ -0.78
CLIP1-203ENST00000361654 GFRALQ6UXV0 394 aa10.18□□□□□ -0.78
CLIP1-203ENST00000361654 GDPGP1Q6ZNW5 385 aa10.18□□□□□ -0.78
CLIP1-203ENST00000361654 UBQLN2Q9UHD9 624 aa10.18□□□□□ -0.78
CLIP1-203ENST00000361654 ASB4Q9Y574 426 aa10.18□□□□□ -0.78
CLIP1-203ENST00000361654 METTL15A6NJ78 407 aa10.18□□□□□ -0.78
CLIP1-203ENST00000361654 ZNF705EA8MWA4 302 aaPredicted RBP10.18□□□□□ -0.78
CLIP1-203ENST00000361654 ABLIM3O94929 683 aa10.18□□□□□ -0.78
CLIP1-203ENST00000361654 VAMP5O95183 116 aa10.18□□□□□ -0.78
CLIP1-203ENST00000361654 CRYZL1O95825 349 aa10.18□□□□□ -0.78
CLIP1-203ENST00000361654 ADH4P08319 380 aa10.18□□□□□ -0.78
CLIP1-203ENST00000361654 BDKRB2P30411 391 aa10.18□□□□□ -0.78
CLIP1-203ENST00000361654 RAB40BQ12829 278 aa10.18□□□□□ -0.78
CLIP1-203ENST00000361654 EIF3IQ13347 325 aaKnown RBP10.18□□□□□ -0.78
CLIP1-203ENST00000361654 GPR19Q15760 415 aa10.18□□□□□ -0.78
CLIP1-203ENST00000361654 OR7E24Q6IFN5 339 aa10.18□□□□□ -0.78
CLIP1-203ENST00000361654 SLC35F3Q8IY50 421 aa10.18□□□□□ -0.78
CLIP1-203ENST00000361654 OR56B1Q8NGI3 324 aa10.18□□□□□ -0.78
CLIP1-203ENST00000361654 ELF4Q99607 663 aaPredicted RBP10.18□□□□□ -0.78
CLIP1-203ENST00000361654 CCDC106Q9BWC9 280 aa10.18□□□□□ -0.78
CLIP1-203ENST00000361654 SLC23A2Q9UGH3 650 aa10.18□□□□□ -0.78
CLIP1-203ENST00000361654 ABCD4O14678 606 aa10.18□□□□□ -0.78
CLIP1-203ENST00000361654 KLK10O43240 276 aa10.18□□□□□ -0.78
CLIP1-203ENST00000361654 PRAMEF4O60810 478 aa10.18□□□□□ -0.78
CLIP1-203ENST00000361654 RFPL3O75679 317 aa10.18□□□□□ -0.78
CLIP1-203ENST00000361654 CXCR4P61073 352 aa10.18□□□□□ -0.78
CLIP1-203ENST00000361654 RAB11AP62491 216 aa10.18□□□□□ -0.78
CLIP1-203ENST00000361654 ELAVL1Q15717 326 aaKnown RBP10.18□□□□□ -0.78
CLIP1-203ENST00000361654 WFDC8Q8IUA0 241 aa10.18□□□□□ -0.78
CLIP1-203ENST00000361654 LGALS12Q96DT0 336 aa10.18□□□□□ -0.78
CLIP1-203ENST00000361654 TXN2Q99757 166 aa10.18□□□□□ -0.78
CLIP1-203ENST00000361654 HAPLN2Q9GZV7 340 aa10.18□□□□□ -0.78
CLIP1-203ENST00000361654 C6orf106Q9H6K1 298 aaPredicted RBP10.18□□□□□ -0.78
CLIP1-203ENST00000361654 MRPL15Q9P015 296 aaKnown RBP10.18□□□□□ -0.78
CLIP1-203ENST00000361654 KIAA1456Q9P272 454 aa10.18□□□□□ -0.78
CLIP1-203ENST00000361654 PRELID1Q9Y255 219 aa10.18□□□□□ -0.78
CLIP1-203ENST00000361654 CCL26Q9Y258 94 aa10.18□□□□□ -0.78
CLIP1-203ENST00000361654 SDK1Q7Z5N4 2213 aa10.18□□□□□ -0.78
CLIP1-203ENST00000361654 PCP4L1A6NKN8 68 aa10.18□□□□□ -0.78
CLIP1-203ENST00000361654 PTAFRP25105 342 aa10.18□□□□□ -0.78
CLIP1-203ENST00000361654 SLC14A1Q13336 389 aa10.18□□□□□ -0.78
CLIP1-203ENST00000361654 MRPL2Q5T653 305 aaKnown RBP10.18□□□□□ -0.78
CLIP1-203ENST00000361654 PIP5KL1Q5T9C9 394 aa10.18□□□□□ -0.78
CLIP1-203ENST00000361654 MED25Q71SY5 747 aa10.18□□□□□ -0.78
CLIP1-203ENST00000361654 CMIPQ8IY22 773 aa10.18□□□□□ -0.78
CLIP1-203ENST00000361654 NETO1Q8TDF5 533 aa10.18□□□□□ -0.78
CLIP1-203ENST00000361654 TSNAXQ99598 290 aaKnown RBP10.18□□□□□ -0.78
CLIP1-203ENST00000361654 SLC30A3Q99726 388 aa10.18□□□□□ -0.78
CLIP1-203ENST00000361654 LIN7BQ9HAP6 207 aa10.18□□□□□ -0.78
CLIP1-203ENST00000361654 HCSTQ9UBK5 93 aa10.18□□□□□ -0.78
CLIP1-203ENST00000361654 FBXO4Q9UKT5 387 aa10.18□□□□□ -0.78
CLIP1-203ENST00000361654 LGALS8O00214 317 aa10.17□□□□□ -0.78
CLIP1-203ENST00000361654 RGRP47804 291 aa10.17□□□□□ -0.78
CLIP1-203ENST00000361654 PPIAP62937 165 aaKnown RBP10.17□□□□□ -0.78
CLIP1-203ENST00000361654 FAM189BP81408 668 aa10.17□□□□□ -0.78
CLIP1-203ENST00000361654 ACTBL2Q562R1 376 aa10.17□□□□□ -0.78
CLIP1-203ENST00000361654 MEPCEQ7L2J0 689 aaKnown RBP10.17□□□□□ -0.78
CLIP1-203ENST00000361654 SYT13Q7L8C5 426 aa10.17□□□□□ -0.78
CLIP1-203ENST00000361654 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.17□□□□□ -0.78
CLIP1-203ENST00000361654 ARFGAP1Q8N6T3 406 aa10.17□□□□□ -0.78
CLIP1-203ENST00000361654 ISOC1Q96CN7 298 aa10.17□□□□□ -0.78
CLIP1-203ENST00000361654 DEFB127Q9H1M4 99 aa10.17□□□□□ -0.78
CLIP1-203ENST00000361654 KIR3DX1Q9H7L2 352 aa10.17□□□□□ -0.78
CLIP1-203ENST00000361654 SDR39U1Q9NRG7 319 aaPredicted RBP10.17□□□□□ -0.78
CLIP1-203ENST00000361654 PRSS21Q9Y6M0 314 aa10.17□□□□□ -0.78
CLIP1-203ENST00000361654 TRAV27A0A087WT01 109 aa10.17□□□□□ -0.78
CLIP1-203ENST00000361654 C17orf112F2Z3M2 114 aa10.17□□□□□ -0.78
CLIP1-203ENST00000361654 DPM1O60762 260 aa10.17□□□□□ -0.78
CLIP1-203ENST00000361654 MED6O75586 246 aa10.17□□□□□ -0.78
CLIP1-203ENST00000361654 CLIC3O95833 236 aa10.17□□□□□ -0.78
CLIP1-203ENST00000361654 ZNF14P17017 642 aaPredicted RBP10.17□□□□□ -0.78
CLIP1-203ENST00000361654 BIDP55957 195 aa10.17□□□□□ -0.78
CLIP1-203ENST00000361654 SLC5A12Q1EHB4 618 aa10.17□□□□□ -0.78
CLIP1-203ENST00000361654 TSSK4Q6SA08 328 aa10.17□□□□□ -0.78
CLIP1-203ENST00000361654 FBXW12Q6X9E4 464 aa10.17□□□□□ -0.78
CLIP1-203ENST00000361654 PRSS48Q7RTY5 328 aa10.17□□□□□ -0.78
CLIP1-203ENST00000361654 ZNF321PQ8N8H1 164 aa10.17□□□□□ -0.78
CLIP1-203ENST00000361654 GNB4Q9HAV0 340 aa10.17□□□□□ -0.78
CLIP1-203ENST00000361654 ANKRD10Q9NXR5 420 aa10.17□□□□□ -0.78
CLIP1-203ENST00000361654 V9GY05 133 aa10.17□□□□□ -0.78
CLIP1-203ENST00000361654 EIF4E2O60573 245 aaKnown RBP10.17□□□□□ -0.78
CLIP1-203ENST00000361654 MRPS14O60783 128 aaKnown RBP10.17□□□□□ -0.78
CLIP1-203ENST00000361654 REEP5Q00765 189 aa10.17□□□□□ -0.78
CLIP1-203ENST00000361654 BTLAQ7Z6A9 289 aa10.17□□□□□ -0.78
CLIP1-203ENST00000361654 SIRT6Q8N6T7 355 aa10.17□□□□□ -0.78
CLIP1-203ENST00000361654 UHRF2Q96PU4 802 aa10.17□□□□□ -0.78
CLIP1-203ENST00000361654 ACPTQ9BZG2 426 aa10.17□□□□□ -0.78
CLIP1-203ENST00000361654 SAP130Q9H0E3 1048 aa10.17□□□□□ -0.78
CLIP1-203ENST00000361654 AK6Q9Y3D8 172 aaKnown RBP10.17□□□□□ -0.78
CLIP1-203ENST00000361654 TNFRSF1BP20333 461 aa10.17□□□□□ -0.78
CLIP1-203ENST00000361654 IRS1P35568 1242 aa10.17□□□□□ -0.78
CLIP1-203ENST00000361654 PPP5CP53041 499 aa10.17□□□□□ -0.78
CLIP1-203ENST00000361654 C1orf220Q5T0J3 134 aa10.17□□□□□ -0.78
CLIP1-203ENST00000361654 SFRP5Q5T4F7 317 aa10.17□□□□□ -0.78
CLIP1-203ENST00000361654 PGAP1Q75T13 922 aa10.17□□□□□ -0.78
CLIP1-203ENST00000361654 VRK2Q86Y07 508 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms