RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 GSG1LQ6UXU4 331 aa17.2■□□□□ 0.34
CLIP2-202ENST00000361545 SPAG16Q8N0X2 631 aa17.2■□□□□ 0.34
CLIP2-202ENST00000361545 ZNF610Q8N9Z0 462 aa17.2■□□□□ 0.34
CLIP2-202ENST00000361545 STT3BQ8TCJ2 826 aa17.2■□□□□ 0.34
CLIP2-202ENST00000361545 USB1Q9BQ65 265 aaKnown RBP17.2■□□□□ 0.34
CLIP2-202ENST00000361545 SIDT1Q9NXL6 827 aaKnown RBP17.2■□□□□ 0.34
CLIP2-202ENST00000361545 LOXL2Q9Y4K0 774 aa17.2■□□□□ 0.34
CLIP2-202ENST00000361545 SLC22A7Q9Y694 548 aa17.2■□□□□ 0.34
CLIP2-202ENST00000361545 TRIM64BA6NI03 449 aa17.19■□□□□ 0.34
CLIP2-202ENST00000361545 BCAS1O75363 584 aaPredicted RBP17.19■□□□□ 0.34
CLIP2-202ENST00000361545 CBX7O95931 251 aa17.19■□□□□ 0.34
CLIP2-202ENST00000361545 GABRG2P18507 467 aa17.19■□□□□ 0.34
CLIP2-202ENST00000361545 CMTM1Q8IZ96 169 aa17.19■□□□□ 0.34
CLIP2-202ENST00000361545 STOML3Q8TAV4 291 aa17.19■□□□□ 0.34
CLIP2-202ENST00000361545 BAHD1Q8TBE0 780 aaPredicted RBP17.19■□□□□ 0.34
CLIP2-202ENST00000361545 MUTYHQ9UIF7 546 aa17.19■□□□□ 0.34
CLIP2-202ENST00000361545 A0A1W2PR48 441 aa17.19■□□□□ 0.34
CLIP2-202ENST00000361545 HMX2A2RU54 273 aa17.19■□□□□ 0.34
CLIP2-202ENST00000361545 POLR2IP36954 125 aaKnown RBP17.19■□□□□ 0.34
CLIP2-202ENST00000361545 EIF1P41567 113 aaKnown RBP17.19■□□□□ 0.34
CLIP2-202ENST00000361545 METAP1P53582 386 aa17.19■□□□□ 0.34
CLIP2-202ENST00000361545 DUSP5Q16690 384 aa17.19■□□□□ 0.34
CLIP2-202ENST00000361545 ZNF691Q5VV52 312 aa17.19■□□□□ 0.34
CLIP2-202ENST00000361545 MZB1Q8WU39 189 aa17.19■□□□□ 0.34
CLIP2-202ENST00000361545 GGHQ92820 318 aa17.19■□□□□ 0.34
CLIP2-202ENST00000361545 C1orf198Q9H425 327 aa17.19■□□□□ 0.34
CLIP2-202ENST00000361545 A4GALTQ9NPC4 353 aa17.19■□□□□ 0.34
CLIP2-202ENST00000361545 PCDHGA1Q9Y5H4 931 aa17.19■□□□□ 0.34
CLIP2-202ENST00000361545 V9GY05 133 aa17.19■□□□□ 0.34
CLIP2-202ENST00000361545 TRAPPC2LH3BP13 241 aa17.19■□□□□ 0.34
CLIP2-202ENST00000361545 CEACAM5P06731 702 aa17.19■□□□□ 0.34
CLIP2-202ENST00000361545 PRKAR1BP31321 381 aa17.19■□□□□ 0.34
CLIP2-202ENST00000361545 TRHRP34981 398 aaPredicted RBP17.19■□□□□ 0.34
CLIP2-202ENST00000361545 C5orf46Q6UWT4 87 aa17.19■□□□□ 0.34
CLIP2-202ENST00000361545 ASB17Q8WXJ9 295 aa17.19■□□□□ 0.34
CLIP2-202ENST00000361545 UTP4Q969X6 686 aaKnown RBP17.19■□□□□ 0.34
CLIP2-202ENST00000361545 METTL15A6NJ78 407 aa17.19■□□□□ 0.34
CLIP2-202ENST00000361545 RAB3DO95716 219 aa17.19■□□□□ 0.34
CLIP2-202ENST00000361545 CAPZBP47756 277 aa17.19■□□□□ 0.34
CLIP2-202ENST00000361545 ZNF836Q6ZNA1 936 aa17.19■□□□□ 0.34
CLIP2-202ENST00000361545 GDF7Q7Z4P5 450 aa17.19■□□□□ 0.34
CLIP2-202ENST00000361545 HSD17B8Q92506 261 aa17.19■□□□□ 0.34
CLIP2-202ENST00000361545 LCMT2O60294 686 aaKnown RBP17.18■□□□□ 0.34
CLIP2-202ENST00000361545 ATG12O94817 140 aa17.18■□□□□ 0.34
CLIP2-202ENST00000361545 MAKP20794 623 aa17.18■□□□□ 0.34
CLIP2-202ENST00000361545 LINC00346Q8IVM7 164 aa17.18■□□□□ 0.34
CLIP2-202ENST00000361545 MICU1Q9BPX6 476 aa17.18■□□□□ 0.34
CLIP2-202ENST00000361545 COL22A1Q8NFW1 1626 aaPredicted RBP17.18■□□□□ 0.34
CLIP2-202ENST00000361545 DVL2O14641 736 aa17.18■□□□□ 0.34
CLIP2-202ENST00000361545 TNFSF15O95150 251 aa17.18■□□□□ 0.34
CLIP2-202ENST00000361545 IGHV3-9P01782 118 aa17.18■□□□□ 0.34
CLIP2-202ENST00000361545 CA5AP35218 305 aa17.18■□□□□ 0.34
CLIP2-202ENST00000361545 ETV5P41161 510 aa17.18■□□□□ 0.34
CLIP2-202ENST00000361545 GDPGP1Q6ZNW5 385 aa17.18■□□□□ 0.34
CLIP2-202ENST00000361545 PIWIL3Q7Z3Z3 882 aaKnown RBP17.18■□□□□ 0.34
CLIP2-202ENST00000361545 CHPT1Q8WUD6 406 aa17.18■□□□□ 0.34
CLIP2-202ENST00000361545 CNOT9Q92600 299 aaKnown RBP17.18■□□□□ 0.34
CLIP2-202ENST00000361545 OR52A5Q9H2C5 316 aa17.18■□□□□ 0.34
CLIP2-202ENST00000361545 NPFFR2Q9Y5X5 522 aa17.18■□□□□ 0.34
CLIP2-202ENST00000361545 HMX3A6NHT5 357 aa17.18■□□□□ 0.34
CLIP2-202ENST00000361545 TIMM8AO60220 97 aaPredicted RBP17.18■□□□□ 0.34
CLIP2-202ENST00000361545 KDM8Q8N371 416 aa17.18■□□□□ 0.34
CLIP2-202ENST00000361545 SIMC1Q8NDZ2 872 aa17.18■□□□□ 0.34
CLIP2-202ENST00000361545 GLYATL2Q8WU03 294 aa17.18■□□□□ 0.34
CLIP2-202ENST00000361545 PLA2G2FQ9BZM2 168 aa17.18■□□□□ 0.34
CLIP2-202ENST00000361545 NT5DC2Q9H857 520 aa17.18■□□□□ 0.34
CLIP2-202ENST00000361545 CNOT2Q9NZN8 540 aaKnown RBP17.18■□□□□ 0.34
CLIP2-202ENST00000361545 DUSP13Q9UII6 198 aa17.18■□□□□ 0.34
CLIP2-202ENST00000361545 FGF17O60258 216 aa17.18■□□□□ 0.34
CLIP2-202ENST00000361545 EMX1Q04741 257 aaPredicted RBP17.18■□□□□ 0.34
CLIP2-202ENST00000361545 ZNF813Q6ZN06 617 aa17.18■□□□□ 0.34
CLIP2-202ENST00000361545 COX15Q7KZN9 410 aa17.18■□□□□ 0.34
CLIP2-202ENST00000361545 DPY19L4Q7Z388 723 aa17.18■□□□□ 0.34
CLIP2-202ENST00000361545 PXKQ7Z7A4 578 aa17.18■□□□□ 0.34
CLIP2-202ENST00000361545 DAPP51397 102 aa17.18■□□□□ 0.34
CLIP2-202ENST00000361545 SYT13Q7L8C5 426 aa17.18■□□□□ 0.34
CLIP2-202ENST00000361545 CCDC71LQ8N9Z2 235 aa17.18■□□□□ 0.34
CLIP2-202ENST00000361545 ISL2Q96A47 359 aa17.18■□□□□ 0.34
CLIP2-202ENST00000361545 ARL6Q9H0F7 186 aa17.18■□□□□ 0.34
CLIP2-202ENST00000361545 ASB1Q9Y576 335 aa17.18■□□□□ 0.34
CLIP2-202ENST00000361545 METTL12A8MUP2 240 aa17.17■□□□□ 0.34
CLIP2-202ENST00000361545 GLB1P16278 677 aa17.17■□□□□ 0.34
CLIP2-202ENST00000361545 BTG2P78543 158 aa17.17■□□□□ 0.34
CLIP2-202ENST00000361545 YRDCQ86U90 279 aaKnown RBP17.17■□□□□ 0.34
CLIP2-202ENST00000361545 INPP5EQ9NRR6 644 aa17.17■□□□□ 0.34
CLIP2-202ENST00000361545 RASD1Q9Y272 281 aa17.17■□□□□ 0.34
CLIP2-202ENST00000361545 SSC5DA1L4H1 1573 aa17.17■□□□□ 0.34
CLIP2-202ENST00000361545 EIF1BO60739 113 aaKnown RBP17.17■□□□□ 0.34
CLIP2-202ENST00000361545 SLC36A2Q495M3 483 aa17.17■□□□□ 0.34
CLIP2-202ENST00000361545 FUNDC1Q8IVP5 155 aa17.17■□□□□ 0.34
CLIP2-202ENST00000361545 SLC35F3Q8IY50 421 aa17.17■□□□□ 0.34
CLIP2-202ENST00000361545 TSLPQ969D9 159 aa17.17■□□□□ 0.34
CLIP2-202ENST00000361545 ZC3HAV1LQ96H79 300 aaKnown RBP17.17■□□□□ 0.34
CLIP2-202ENST00000361545 GPR78Q96P69 363 aa17.17■□□□□ 0.34
CLIP2-202ENST00000361545 PPT2Q9UMR5 302 aa17.17■□□□□ 0.34
CLIP2-202ENST00000361545 ZNF736B4DX44 427 aaPredicted RBP17.17■□□□□ 0.34
CLIP2-202ENST00000361545 SCGB2A1O75556 95 aa17.17■□□□□ 0.34
CLIP2-202ENST00000361545 SERPINE2P07093 398 aa17.17■□□□□ 0.34
CLIP2-202ENST00000361545 ZNF695Q8IW36 515 aa17.17■□□□□ 0.34
CLIP2-202ENST00000361545 ABHD11Q8NFV4 315 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms