RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 ZNF454Q8N9F8 522 aa9.32□□□□□ -0.92
PTPRA-203ENST00000356147 RASD2Q96D21 266 aa9.32□□□□□ -0.92
PTPRA-203ENST00000356147 NARS2Q96I59 477 aaKnown RBP9.32□□□□□ -0.92
PTPRA-203ENST00000356147 HSPA12BQ96MM6 686 aa9.32□□□□□ -0.92
PTPRA-203ENST00000356147 MS4A4EQ96PG1 132 aa9.32□□□□□ -0.92
PTPRA-203ENST00000356147 JAM3Q9BX67 310 aa9.32□□□□□ -0.92
PTPRA-203ENST00000356147 CHST6Q9GZX3 395 aa9.32□□□□□ -0.92
PTPRA-203ENST00000356147 SHARPINQ9H0F6 387 aa9.32□□□□□ -0.92
PTPRA-203ENST00000356147 ZBP1Q9H171 429 aa9.32□□□□□ -0.92
PTPRA-203ENST00000356147 NRIP3Q9NQ35 241 aa9.32□□□□□ -0.92
PTPRA-203ENST00000356147 FLRT3Q9NZU0 649 aa9.32□□□□□ -0.92
PTPRA-203ENST00000356147 RABL2AQ9UBK7 228 aaPredicted RBP9.32□□□□□ -0.92
PTPRA-203ENST00000356147 FBXO9Q9UK97 447 aaPredicted RBP9.32□□□□□ -0.92
PTPRA-203ENST00000356147 CARNS1A5YM72 827 aa9.31□□□□□ -0.92
PTPRA-203ENST00000356147 GRXCR1A8MXD5 290 aa9.31□□□□□ -0.92
PTPRA-203ENST00000356147 MCIDASD6RGH6 385 aa9.31□□□□□ -0.92
PTPRA-203ENST00000356147 ZFPL1O95159 310 aa9.31□□□□□ -0.92
PTPRA-203ENST00000356147 RLN2P04090 185 aa9.31□□□□□ -0.92
PTPRA-203ENST00000356147 GABRA3P34903 492 aa9.31□□□□□ -0.92
PTPRA-203ENST00000356147 TAS2R43P59537 309 aa9.31□□□□□ -0.92
PTPRA-203ENST00000356147 CBFBQ13951 182 aa9.31□□□□□ -0.92
PTPRA-203ENST00000356147 HNRNPA1L2Q32P51 320 aaKnown RBP9.31□□□□□ -0.92
PTPRA-203ENST00000356147 TMEM35AQ53FP2 167 aa9.31□□□□□ -0.92
PTPRA-203ENST00000356147 DCST2Q5T1A1 773 aa9.31□□□□□ -0.92
PTPRA-203ENST00000356147 SLC35F2Q8IXU6 374 aa9.31□□□□□ -0.92
PTPRA-203ENST00000356147 OR5T3Q8NGG3 340 aa9.31□□□□□ -0.92
PTPRA-203ENST00000356147 COX14Q96I36 57 aa9.31□□□□□ -0.92
PTPRA-203ENST00000356147 MNTQ99583 582 aa9.31□□□□□ -0.92
PTPRA-203ENST00000356147 SAV1Q9H4B6 383 aaPredicted RBP9.31□□□□□ -0.92
PTPRA-203ENST00000356147 CD93Q9NPY3 652 aa9.31□□□□□ -0.92
PTPRA-203ENST00000356147 OR5V1Q9UGF6 321 aa9.31□□□□□ -0.92
PTPRA-203ENST00000356147 PFDN2Q9UHV9 154 aa9.31□□□□□ -0.92
PTPRA-203ENST00000356147 HRH3Q9Y5N1 445 aa9.31□□□□□ -0.92
PTPRA-203ENST00000356147 SESN1Q9Y6P5 492 aa9.31□□□□□ -0.92
PTPRA-203ENST00000356147 A0A1B0GUH1 482 aa9.31□□□□□ -0.92
PTPRA-203ENST00000356147 FAM74A7A6NL05 159 aa9.31□□□□□ -0.92
PTPRA-203ENST00000356147 RP2O75695 350 aa9.31□□□□□ -0.92
PTPRA-203ENST00000356147 LYPD3O95274 346 aa9.31□□□□□ -0.92
PTPRA-203ENST00000356147 TGM6O95932 706 aa9.31□□□□□ -0.92
PTPRA-203ENST00000356147 OR8G3PP0DMU2 310 aa9.31□□□□□ -0.92
PTPRA-203ENST00000356147 LIPCP11150 499 aa9.31□□□□□ -0.92
PTPRA-203ENST00000356147 LAG3P18627 525 aa9.31□□□□□ -0.92
PTPRA-203ENST00000356147 ACHEP22303 614 aa9.31□□□□□ -0.92
PTPRA-203ENST00000356147 S100A11P31949 105 aa9.31□□□□□ -0.92
PTPRA-203ENST00000356147 SEC61A1P61619 476 aaKnown RBP9.31□□□□□ -0.92
PTPRA-203ENST00000356147 SORDQ00796 357 aa9.31□□□□□ -0.92
PTPRA-203ENST00000356147 STK11Q15831 433 aa9.31□□□□□ -0.92
PTPRA-203ENST00000356147 CSRP2Q16527 193 aa9.31□□□□□ -0.92
PTPRA-203ENST00000356147 LRRC37A5PQ49AS3 106 aa9.31□□□□□ -0.92
PTPRA-203ENST00000356147 FAM74A3Q4VXF1 159 aa9.31□□□□□ -0.92
PTPRA-203ENST00000356147 ELP2Q6IA86 826 aa9.31□□□□□ -0.92
PTPRA-203ENST00000356147 MAMSTRQ6ZN01 415 aa9.31□□□□□ -0.92
PTPRA-203ENST00000356147 CMIPQ8IY22 773 aa9.31□□□□□ -0.92
PTPRA-203ENST00000356147 LSM14AQ8ND56 463 aaKnown RBP9.31□□□□□ -0.92
PTPRA-203ENST00000356147 OR4N2Q8NGD1 307 aa9.31□□□□□ -0.92
PTPRA-203ENST00000356147 SMARCD2Q92925 531 aa9.31□□□□□ -0.92
PTPRA-203ENST00000356147 C10orf90Q96M02 699 aa9.31□□□□□ -0.92
PTPRA-203ENST00000356147 ULBP3Q9BZM4 244 aa9.31□□□□□ -0.92
PTPRA-203ENST00000356147 KIF25Q9UIL4 384 aa9.31□□□□□ -0.92
PTPRA-203ENST00000356147 CHD9Q3L8U1 2897 aa9.31□□□□□ -0.92
PTPRA-203ENST00000356147 TRAV1-2A0A0B4J238 106 aa9.31□□□□□ -0.92
PTPRA-203ENST00000356147 A0A1B0GWA3 101 aa9.31□□□□□ -0.92
PTPRA-203ENST00000356147 DUXAA6NLW8 204 aa9.31□□□□□ -0.92
PTPRA-203ENST00000356147 EML2O95834 649 aa9.31□□□□□ -0.92
PTPRA-203ENST00000356147 EGFP01133 1207 aa9.31□□□□□ -0.92
PTPRA-203ENST00000356147 CXCL10P02778 98 aa9.31□□□□□ -0.92
PTPRA-203ENST00000356147 ADH1AP07327 375 aa9.31□□□□□ -0.92
PTPRA-203ENST00000356147 EPCAMP16422 314 aa9.31□□□□□ -0.92
PTPRA-203ENST00000356147 ITPKBP27987 946 aa9.31□□□□□ -0.92
PTPRA-203ENST00000356147 TM4SF4P48230 202 aa9.31□□□□□ -0.92
PTPRA-203ENST00000356147 EMDP50402 254 aa9.31□□□□□ -0.92
PTPRA-203ENST00000356147 TPMTP51580 245 aa9.31□□□□□ -0.92
PTPRA-203ENST00000356147 AKR1C2P52895 323 aa9.31□□□□□ -0.92
PTPRA-203ENST00000356147 AKR1C1Q04828 323 aa9.31□□□□□ -0.92
PTPRA-203ENST00000356147 RUNX2Q13950 521 aa9.31□□□□□ -0.92
PTPRA-203ENST00000356147 ELAVL3Q14576 367 aaKnown RBP9.31□□□□□ -0.92
PTPRA-203ENST00000356147 ATXN7L3Q14CW9 347 aaPredicted RBP9.31□□□□□ -0.92
PTPRA-203ENST00000356147 TRAM1Q15629 374 aa9.31□□□□□ -0.92
PTPRA-203ENST00000356147 HACD4Q5VWC8 232 aa9.31□□□□□ -0.92
PTPRA-203ENST00000356147 SEZ6L2Q6UXD5 910 aa9.31□□□□□ -0.92
PTPRA-203ENST00000356147 VN1R4Q7Z5H5 301 aa9.31□□□□□ -0.92
PTPRA-203ENST00000356147 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.31□□□□□ -0.92
PTPRA-203ENST00000356147 TMPRSS12Q86WS5 348 aa9.31□□□□□ -0.92
PTPRA-203ENST00000356147 RAB42Q8N4Z0 105 aa9.31□□□□□ -0.92
PTPRA-203ENST00000356147 OR10AC1Q8NH08 325 aa9.31□□□□□ -0.92
PTPRA-203ENST00000356147 RGP1Q92546 391 aaPredicted RBP9.31□□□□□ -0.92
PTPRA-203ENST00000356147 WNT2BQ93097 391 aa9.31□□□□□ -0.92
PTPRA-203ENST00000356147 CNN2Q99439 309 aaKnown RBP9.31□□□□□ -0.92
PTPRA-203ENST00000356147 NCDNQ9UBB6 729 aa9.31□□□□□ -0.92
PTPRA-203ENST00000356147 ING1Q9UK53 422 aaPredicted RBP9.31□□□□□ -0.92
PTPRA-203ENST00000356147 MRPS2Q9Y399 296 aaKnown RBP9.31□□□□□ -0.92
PTPRA-203ENST00000356147 TBC1D3EA0A087X179 549 aa9.3□□□□□ -0.92
PTPRA-203ENST00000356147 TBC1D3BA6NDS4 549 aa9.3□□□□□ -0.92
PTPRA-203ENST00000356147 GABARAPH6UMI1 98 aa9.3□□□□□ -0.92
PTPRA-203ENST00000356147 P2RX6O15547 441 aa9.3□□□□□ -0.92
PTPRA-203ENST00000356147 GALR3O60755 368 aaPredicted RBP9.3□□□□□ -0.92
PTPRA-203ENST00000356147 IL32P24001 234 aa9.3□□□□□ -0.92
PTPRA-203ENST00000356147 DPP4P27487 766 aa9.3□□□□□ -0.92
PTPRA-203ENST00000356147 VASPP50552 380 aaPredicted RBP9.3□□□□□ -0.92
PTPRA-203ENST00000356147 ERVK-25P63136 954 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms