RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 TOR2AQ5JU69 321 aa7.89□□□□□ -1.15
TRIM55-204ENST00000353317 FHL5Q5TD97 284 aa7.89□□□□□ -1.15
TRIM55-204ENST00000353317 WDR74Q6RFH5 385 aaPredicted RBP7.89□□□□□ -1.15
TRIM55-204ENST00000353317 LYPD4Q6UWN0 246 aa7.89□□□□□ -1.15
TRIM55-204ENST00000353317 TTLL10Q6ZVT0 673 aa7.89□□□□□ -1.15
TRIM55-204ENST00000353317 MEPCEQ7L2J0 689 aaKnown RBP7.89□□□□□ -1.15
TRIM55-204ENST00000353317 PLXDC1Q8IUK5 500 aa7.89□□□□□ -1.15
TRIM55-204ENST00000353317 SLC38A6Q8IZM9 456 aa7.89□□□□□ -1.15
TRIM55-204ENST00000353317 C17orf47Q8NEP4 570 aa7.89□□□□□ -1.15
TRIM55-204ENST00000353317 OR10H4Q8NGA5 316 aa7.89□□□□□ -1.15
TRIM55-204ENST00000353317 OR4K14Q8NGD5 310 aa7.89□□□□□ -1.15
TRIM55-204ENST00000353317 TRMT10AQ8TBZ6 339 aaKnown RBP7.89□□□□□ -1.15
TRIM55-204ENST00000353317 SMAP2Q8WU79 429 aaPredicted RBP7.89□□□□□ -1.15
TRIM55-204ENST00000353317 KCTD12Q96CX2 325 aaKnown RBP7.89□□□□□ -1.15
TRIM55-204ENST00000353317 MMABQ96EY8 250 aaPredicted RBP7.89□□□□□ -1.15
TRIM55-204ENST00000353317 MS4A3Q96HJ5 214 aa7.89□□□□□ -1.15
TRIM55-204ENST00000353317 MESP1Q9BRJ9 268 aa7.89□□□□□ -1.15
TRIM55-204ENST00000353317 DPH1Q9BZG8 443 aa7.89□□□□□ -1.15
TRIM55-204ENST00000353317 TRIM36Q9NQ86 728 aa7.89□□□□□ -1.15
TRIM55-204ENST00000353317 C20orf141Q9NUB4 165 aa7.89□□□□□ -1.15
TRIM55-204ENST00000353317 ZMIZ1Q9ULJ6 1067 aa7.89□□□□□ -1.15
TRIM55-204ENST00000353317 ING4Q9UNL4 249 aa7.89□□□□□ -1.15
TRIM55-204ENST00000353317 DAPL1A0PJW8 107 aa7.88□□□□□ -1.15
TRIM55-204ENST00000353317 LNP1A1A4G5 178 aa7.88□□□□□ -1.15
TRIM55-204ENST00000353317 BHLHE40O14503 412 aa7.88□□□□□ -1.15
TRIM55-204ENST00000353317 ZNF749O43361 778 aa7.88□□□□□ -1.15
TRIM55-204ENST00000353317 PLPP2O43688 288 aa7.88□□□□□ -1.15
TRIM55-204ENST00000353317 SLC22A5O76082 557 aa7.88□□□□□ -1.15
TRIM55-204ENST00000353317 SOX30O94993 753 aa7.88□□□□□ -1.15
TRIM55-204ENST00000353317 OR5F1O95221 314 aa7.88□□□□□ -1.15
TRIM55-204ENST00000353317 TCRBP04435 133 aa7.88□□□□□ -1.15
TRIM55-204ENST00000353317 CD3GP09693 182 aa7.88□□□□□ -1.15
TRIM55-204ENST00000353317 MAOAP21397 527 aa7.88□□□□□ -1.15
TRIM55-204ENST00000353317 STOMP27105 288 aa7.88□□□□□ -1.15
TRIM55-204ENST00000353317 MPLP40238 635 aa7.88□□□□□ -1.15
TRIM55-204ENST00000353317 SLC3A1Q07837 685 aa7.88□□□□□ -1.15
TRIM55-204ENST00000353317 GALEQ14376 348 aa7.88□□□□□ -1.15
TRIM55-204ENST00000353317 NR0B2Q15466 257 aa7.88□□□□□ -1.15
TRIM55-204ENST00000353317 KLHL12Q53G59 568 aa7.88□□□□□ -1.15
TRIM55-204ENST00000353317 RPTNQ6XPR3 784 aa7.88□□□□□ -1.15
TRIM55-204ENST00000353317 WDR88Q6ZMY6 472 aa7.88□□□□□ -1.15
TRIM55-204ENST00000353317 BMP8AQ7Z5Y6 402 aa7.88□□□□□ -1.15
TRIM55-204ENST00000353317 CEACAM19Q7Z692 300 aa7.88□□□□□ -1.15
TRIM55-204ENST00000353317 GID4Q8IVV7 300 aa7.88□□□□□ -1.15
TRIM55-204ENST00000353317 ZNF680Q8NEM1 530 aa7.88□□□□□ -1.15
TRIM55-204ENST00000353317 ADAMTS15Q8TE58 950 aa7.88□□□□□ -1.15
TRIM55-204ENST00000353317 PTP4A1Q93096 173 aa7.88□□□□□ -1.15
TRIM55-204ENST00000353317 ZNF501Q96CX3 271 aaPredicted RBP7.88□□□□□ -1.15
TRIM55-204ENST00000353317 CLIP3Q96DZ5 547 aa7.88□□□□□ -1.15
TRIM55-204ENST00000353317 DHRS9Q9BPW9 319 aa7.88□□□□□ -1.15
TRIM55-204ENST00000353317 PRSS27Q9BQR3 290 aa7.88□□□□□ -1.15
TRIM55-204ENST00000353317 ACTRT3Q9BYD9 372 aa7.88□□□□□ -1.15
TRIM55-204ENST00000353317 CHRNA10Q9GZZ6 450 aa7.88□□□□□ -1.15
TRIM55-204ENST00000353317 NARFLQ9H6Q4 476 aa7.88□□□□□ -1.15
TRIM55-204ENST00000353317 HEXA-AS1Q9H8Q6 139 aa7.88□□□□□ -1.15
TRIM55-204ENST00000353317 CALML5Q9NZT1 146 aa7.88□□□□□ -1.15
TRIM55-204ENST00000353317 CLEC4AQ9UMR7 237 aa7.88□□□□□ -1.15
TRIM55-204ENST00000353317 ZNF443Q9Y2A4 671 aaPredicted RBP7.88□□□□□ -1.15
TRIM55-204ENST00000353317 ZNF780BQ9Y6R6 833 aa7.88□□□□□ -1.15
TRIM55-204ENST00000353317 IGHV5-10-1A0A0J9YXX1 117 aa7.88□□□□□ -1.15
TRIM55-204ENST00000353317 LOC105371267A0A1B0GV96 52 aa7.88□□□□□ -1.15
TRIM55-204ENST00000353317 SHOXO15266 292 aa7.88□□□□□ -1.15
TRIM55-204ENST00000353317 PRKNO60260 465 aaPredicted RBP7.88□□□□□ -1.15
TRIM55-204ENST00000353317 SC5DO75845 299 aa7.88□□□□□ -1.15
TRIM55-204ENST00000353317 GPR75O95800 540 aa7.88□□□□□ -1.15
TRIM55-204ENST00000353317 MRPL3P09001 348 aaKnown RBP7.88□□□□□ -1.15
TRIM55-204ENST00000353317 PRG2P13727 222 aa7.88□□□□□ -1.15
TRIM55-204ENST00000353317 MAKP20794 623 aa7.88□□□□□ -1.15
TRIM55-204ENST00000353317 ENPP1P22413 925 aa7.88□□□□□ -1.15
TRIM55-204ENST00000353317 GIFP27352 417 aa7.88□□□□□ -1.15
TRIM55-204ENST00000353317 ZNF136P52737 540 aa7.88□□□□□ -1.15
TRIM55-204ENST00000353317 AP2S1P53680 142 aaPredicted RBP7.88□□□□□ -1.15
TRIM55-204ENST00000353317 RAB38P57729 211 aa7.88□□□□□ -1.15
TRIM55-204ENST00000353317 FAM53BQ14153 422 aa7.88□□□□□ -1.15
TRIM55-204ENST00000353317 EXOSC7Q15024 291 aaKnown RBP7.88□□□□□ -1.15
TRIM55-204ENST00000353317 PRICKLE4Q2TBC4 344 aa7.88□□□□□ -1.15
TRIM55-204ENST00000353317 RNASE12Q5GAN4 147 aaKnown RBP7.88□□□□□ -1.15
TRIM55-204ENST00000353317 PYHIN1Q6K0P9 492 aa7.88□□□□□ -1.15
TRIM55-204ENST00000353317 HEPHL1Q6MZM0 1159 aa7.88□□□□□ -1.15
TRIM55-204ENST00000353317 CDC73Q6P1J9 531 aa7.88□□□□□ -1.15
TRIM55-204ENST00000353317 ZNF836Q6ZNA1 936 aa7.88□□□□□ -1.15
TRIM55-204ENST00000353317 OR8H3Q8N146 312 aa7.88□□□□□ -1.15
TRIM55-204ENST00000353317 LRRC25Q8N386 305 aaPredicted RBP7.88□□□□□ -1.15
TRIM55-204ENST00000353317 C7orf57Q8NEG2 295 aa7.88□□□□□ -1.15
TRIM55-204ENST00000353317 PFN4Q8NHR9 129 aa7.88□□□□□ -1.15
TRIM55-204ENST00000353317 ABHD4Q8TB40 342 aa7.88□□□□□ -1.15
TRIM55-204ENST00000353317 FANK1Q8TC84 345 aa7.88□□□□□ -1.15
TRIM55-204ENST00000353317 BRIX1Q8TDN6 353 aaKnown RBP7.88□□□□□ -1.15
TRIM55-204ENST00000353317 CDS1Q92903 461 aa7.88□□□□□ -1.15
TRIM55-204ENST00000353317 CD180Q99467 661 aa7.88□□□□□ -1.15
TRIM55-204ENST00000353317 DUSP23Q9BVJ7 150 aa7.88□□□□□ -1.15
TRIM55-204ENST00000353317 DPAGT1Q9H3H5 408 aa7.88□□□□□ -1.15
TRIM55-204ENST00000353317 RANBP3Q9H6Z4 567 aaPredicted RBP7.88□□□□□ -1.15
TRIM55-204ENST00000353317 KLHL1Q9NR64 748 aa7.88□□□□□ -1.15
TRIM55-204ENST00000353317 SIDT1Q9NXL6 827 aaKnown RBP7.88□□□□□ -1.15
TRIM55-204ENST00000353317 RIF1Q5UIP0 2472 aaKnown RBP7.87□□□□□ -1.15
TRIM55-204ENST00000353317 TEX13CA0A0J9YWL9 993 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 NSA2O95478 260 aaKnown RBP7.87□□□□□ -1.15
TRIM55-204ENST00000353317 CLUP10909 449 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 ANXA3P12429 323 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms