RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 H2AFY2Q9P0M6 372 aaPredicted RBP5.52□□□□□ -1.53
CLCN3-201ENST00000347613 PHF11Q9UIL8 331 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 SATB2Q9UPW6 733 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 POLHQ9Y253 713 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 MRPS7Q9Y2R9 242 aaKnown RBP5.52□□□□□ -1.53
CLCN3-201ENST00000347613 MED31Q9Y3C7 131 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 ENTPD2Q9Y5L3 495 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 FAM240BA0A1B0GVZ2 78 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 A8MUA0 341 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 FAM25EA8MYX2 175 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 MEN1O00255 615 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 FABP7O15540 132 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 CHP2O43745 196 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 ZNF780AO75290 641 aaPredicted RBP5.52□□□□□ -1.53
CLCN3-201ENST00000347613 HOXC4P09017 264 aaPredicted RBP5.52□□□□□ -1.53
CLCN3-201ENST00000347613 GAAP10253 952 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 EPXP11678 715 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 HLA-DMAP28067 261 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 MTNR1BP49286 362 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 GZMKP49863 264 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 CCINQ13939 588 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 ODF4Q2M2E3 257 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 ANKRD39Q53RE8 183 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 HES5Q5TA89 166 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 FAM199XQ6PEV8 388 aaPredicted RBP5.52□□□□□ -1.53
CLCN3-201ENST00000347613 GALNT6Q8NCL4 622 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 RIT1Q92963 219 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 SLC25A38Q96DW6 304 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 TOE1Q96GM8 510 aaKnown RBP5.52□□□□□ -1.53
CLCN3-201ENST00000347613 MAP6Q96JE9 813 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 ZFP3Q96NJ6 502 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 STACQ99469 402 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 LRRC61Q9BV99 259 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 TPSD1Q9BZJ3 242 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 ULBP3Q9BZM4 244 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 SEMA4CQ9C0C4 833 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 C12orf49Q9H741 205 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 KLK11Q9UBX7 282 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 SERTAD3Q9UJW9 196 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 SLC35A3Q9Y2D2 325 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 HRH3Q9Y5N1 445 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 HEBP2Q9Y5Z4 205 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 PHF3Q92576 2039 aaKnown RBP5.52□□□□□ -1.53
CLCN3-201ENST00000347613 OR5K3A6NET4 321 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 ZFPL1O95159 310 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 HMGN1P05114 100 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 BMP7P18075 431 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 NPR2P20594 1047 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 PAICSP22234 425 aaKnown RBP5.52□□□□□ -1.53
CLCN3-201ENST00000347613 ANOS1P23352 680 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 GIFP27352 417 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 AQP2P41181 271 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 RRAS2P62070 204 aaPredicted RBP5.52□□□□□ -1.53
CLCN3-201ENST00000347613 MRPS15P82914 257 aaKnown RBP5.52□□□□□ -1.53
CLCN3-201ENST00000347613 HHEXQ03014 270 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 FGFBP1Q14512 234 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 QPRTQ15274 297 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 ST3GAL2Q16842 350 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 ZNF684Q5T5D7 378 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 PLET1Q6UQ28 207 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 LRRC69Q6ZNQ3 347 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 KRT74Q7RTS7 529 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 CMTM4Q8IZR5 234 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 LSMEM1Q8N8F7 131 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 CAMKVQ8NCB2 501 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 KIAA1143Q96AT1 154 aaPredicted RBP5.52□□□□□ -1.53
CLCN3-201ENST00000347613 C3orf49Q96BT1 292 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 KTI12Q96EK9 354 aaPredicted RBP5.52□□□□□ -1.53
CLCN3-201ENST00000347613 LMF2Q9BU23 707 aaKnown RBP5.52□□□□□ -1.53
CLCN3-201ENST00000347613 ABCG5Q9H222 651 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 WDR76Q9H967 626 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 NOX4Q9NPH5 578 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 NUDT15Q9NV35 164 aa5.52□□□□□ -1.53
CLCN3-201ENST00000347613 CABIN1Q9Y6J0 2220 aa5.51□□□□□ -1.53
CLCN3-201ENST00000347613 FREM3P0C091 2139 aa5.51□□□□□ -1.53
CLCN3-201ENST00000347613 A0A0J9YY10 115 aa5.51□□□□□ -1.53
CLCN3-201ENST00000347613 SPTY2D1-AS1A0A0U1RR47 76 aa5.51□□□□□ -1.53
CLCN3-201ENST00000347613 FAM221BA6H8Z2 402 aa5.51□□□□□ -1.53
CLCN3-201ENST00000347613 TVP23AA6NH52 213 aa5.51□□□□□ -1.53
CLCN3-201ENST00000347613 C2CD4DB7Z1M9 353 aa5.51□□□□□ -1.53
CLCN3-201ENST00000347613 OGG1O15527 345 aa5.51□□□□□ -1.53
CLCN3-201ENST00000347613 RAD1O60671 282 aa5.51□□□□□ -1.53
CLCN3-201ENST00000347613 SLC35E2P0CK97 266 aa5.51□□□□□ -1.53
CLCN3-201ENST00000347613 TLX1P31314 330 aaPredicted RBP5.51□□□□□ -1.53
CLCN3-201ENST00000347613 ANXA11P50995 505 aaKnown RBP5.51□□□□□ -1.53
CLCN3-201ENST00000347613 CFHR1Q03591 330 aa5.51□□□□□ -1.53
CLCN3-201ENST00000347613 BTBD16Q32M84 506 aa5.51□□□□□ -1.53
CLCN3-201ENST00000347613 TRIQKQ629K1 86 aa5.51□□□□□ -1.53
CLCN3-201ENST00000347613 Q6ZTK2 550 aa5.51□□□□□ -1.53
CLCN3-201ENST00000347613 TAF8Q7Z7C8 310 aa5.51□□□□□ -1.53
CLCN3-201ENST00000347613 MCATQ8IVS2 390 aaKnown RBP5.51□□□□□ -1.53
CLCN3-201ENST00000347613 RNF113BQ8IZP6 322 aaKnown RBP5.51□□□□□ -1.53
CLCN3-201ENST00000347613 C9orf62Q8N4C0 152 aa5.51□□□□□ -1.53
CLCN3-201ENST00000347613 EXD3Q8N9H8 876 aa5.51□□□□□ -1.53
CLCN3-201ENST00000347613 LRRC75AQ8NAA5 344 aa5.51□□□□□ -1.53
CLCN3-201ENST00000347613 C19orf18Q8NEA5 215 aa5.51□□□□□ -1.53
CLCN3-201ENST00000347613 PTPMT1Q8WUK0 201 aaPredicted RBP5.51□□□□□ -1.53
CLCN3-201ENST00000347613 TSLPQ969D9 159 aa5.51□□□□□ -1.53
CLCN3-201ENST00000347613 RERGQ96A58 199 aaPredicted RBP5.51□□□□□ -1.53
CLCN3-201ENST00000347613 MRPL38Q96DV4 380 aaKnown RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms