RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 RPS5P46782 204 aaKnown RBP13.97□□□□□ -0.17
TSPAN4-201ENST00000346501 ART1P52961 327 aa13.97□□□□□ -0.17
TSPAN4-201ENST00000346501 DMTNQ08495 405 aa13.97□□□□□ -0.17
TSPAN4-201ENST00000346501 SLC17A1Q14916 467 aa13.97□□□□□ -0.17
TSPAN4-201ENST00000346501 OR1Q1Q15612 314 aa13.97□□□□□ -0.17
TSPAN4-201ENST00000346501 STK11Q15831 433 aa13.97□□□□□ -0.17
TSPAN4-201ENST00000346501 RABL3Q5HYI8 236 aa13.97□□□□□ -0.17
TSPAN4-201ENST00000346501 FAM69AQ5T7M9 428 aa13.97□□□□□ -0.17
TSPAN4-201ENST00000346501 C6orf89Q6UWU4 347 aa13.97□□□□□ -0.17
TSPAN4-201ENST00000346501 PAMR1Q6UXH9 720 aa13.97□□□□□ -0.17
TSPAN4-201ENST00000346501 P2RY8Q86VZ1 359 aa13.97□□□□□ -0.17
TSPAN4-201ENST00000346501 LURAP1LQ8IV03 231 aa13.97□□□□□ -0.17
TSPAN4-201ENST00000346501 TMEM99Q8N816 258 aa13.97□□□□□ -0.17
TSPAN4-201ENST00000346501 MCHR1Q99705 422 aa13.97□□□□□ -0.17
TSPAN4-201ENST00000346501 ESRP2Q9H6T0 727 aaKnown RBP13.97□□□□□ -0.17
TSPAN4-201ENST00000346501 EFCAB1Q9HAE3 211 aa13.97□□□□□ -0.17
TSPAN4-201ENST00000346501 ARMCX1Q9P291 453 aa13.97□□□□□ -0.17
TSPAN4-201ENST00000346501 PRSS50Q9UI38 385 aa13.97□□□□□ -0.17
TSPAN4-201ENST00000346501 BAG5Q9UL15 447 aa13.97□□□□□ -0.17
TSPAN4-201ENST00000346501 SPG11Q96JI7 2443 aa13.97□□□□□ -0.17
TSPAN4-201ENST00000346501 ANKRD17O75179 2603 aaKnown RBP13.97□□□□□ -0.17
TSPAN4-201ENST00000346501 ABCA4P78363 2273 aa13.96□□□□□ -0.17
TSPAN4-201ENST00000346501 TRAV36DV7A0A075B6V5 113 aa13.96□□□□□ -0.17
TSPAN4-201ENST00000346501 OR6C65A6NJZ3 312 aa13.96□□□□□ -0.17
TSPAN4-201ENST00000346501 TMEM229AB2RXF0 380 aa13.96□□□□□ -0.17
TSPAN4-201ENST00000346501 ZNF814B7Z6K7 855 aa13.96□□□□□ -0.17
TSPAN4-201ENST00000346501 AKAP8O43823 692 aaKnown RBP13.96□□□□□ -0.17
TSPAN4-201ENST00000346501 LYZL6O75951 148 aa13.96□□□□□ -0.17
TSPAN4-201ENST00000346501 LGI1O95970 557 aa13.96□□□□□ -0.17
TSPAN4-201ENST00000346501 GGT1P19440 569 aa13.96□□□□□ -0.17
TSPAN4-201ENST00000346501 KLK2P20151 261 aa13.96□□□□□ -0.17
TSPAN4-201ENST00000346501 HOXC12P31275 282 aa13.96□□□□□ -0.17
TSPAN4-201ENST00000346501 IFNA8P32881 189 aa13.96□□□□□ -0.17
TSPAN4-201ENST00000346501 IST1P53990 364 aa13.96□□□□□ -0.17
TSPAN4-201ENST00000346501 IL1RL1Q01638 556 aa13.96□□□□□ -0.17
TSPAN4-201ENST00000346501 VEZF1Q14119 521 aa13.96□□□□□ -0.17
TSPAN4-201ENST00000346501 GLIPR1L2Q4G1C9 344 aa13.96□□□□□ -0.17
TSPAN4-201ENST00000346501 OR7E24Q6IFN5 339 aa13.96□□□□□ -0.17
TSPAN4-201ENST00000346501 ZNF613Q6PF04 617 aa13.96□□□□□ -0.17
TSPAN4-201ENST00000346501 AAED1Q7RTV5 226 aa13.96□□□□□ -0.17
TSPAN4-201ENST00000346501 C10orf53Q8N6V4 93 aa13.96□□□□□ -0.17
TSPAN4-201ENST00000346501 NRGNQ92686 78 aa13.96□□□□□ -0.17
TSPAN4-201ENST00000346501 RCN3Q96D15 328 aa13.96□□□□□ -0.17
TSPAN4-201ENST00000346501 CMTM5Q96DZ9 223 aa13.96□□□□□ -0.17
TSPAN4-201ENST00000346501 CCM2LQ9NUG4 571 aaPredicted RBP13.96□□□□□ -0.17
TSPAN4-201ENST00000346501 TAS2R16Q9NYV7 291 aa13.96□□□□□ -0.17
TSPAN4-201ENST00000346501 PLEKHA6Q9Y2H5 1048 aa13.96□□□□□ -0.17
TSPAN4-201ENST00000346501 FLVCR1Q9Y5Y0 555 aa13.96□□□□□ -0.17
TSPAN4-201ENST00000346501 CCDC168Q8NDH2 2452 aa13.95□□□□□ -0.18
TSPAN4-201ENST00000346501 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.95□□□□□ -0.18
TSPAN4-201ENST00000346501 GMNCA6NCL1 334 aa13.95□□□□□ -0.18
TSPAN4-201ENST00000346501 DEFB108AA8MXU0 73 aa13.95□□□□□ -0.18
TSPAN4-201ENST00000346501 AIM2O14862 343 aa13.95□□□□□ -0.18
TSPAN4-201ENST00000346501 NPIPB7O75200 414 aa13.95□□□□□ -0.18
TSPAN4-201ENST00000346501 IGHV3-9P01782 118 aa13.95□□□□□ -0.18
TSPAN4-201ENST00000346501 COX4I1P13073 169 aa13.95□□□□□ -0.18
TSPAN4-201ENST00000346501 ZNF43P17038 809 aa13.95□□□□□ -0.18
TSPAN4-201ENST00000346501 CD247P20963 164 aa13.95□□□□□ -0.18
TSPAN4-201ENST00000346501 FAPQ12884 760 aa13.95□□□□□ -0.18
TSPAN4-201ENST00000346501 C1DQ13901 141 aaKnown RBP13.95□□□□□ -0.18
TSPAN4-201ENST00000346501 DUSP7Q16829 419 aa13.95□□□□□ -0.18
TSPAN4-201ENST00000346501 CCDC80Q76M96 950 aa13.95□□□□□ -0.18
TSPAN4-201ENST00000346501 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.95□□□□□ -0.18
TSPAN4-201ENST00000346501 POU5F2Q8N7G0 328 aa13.95□□□□□ -0.18
TSPAN4-201ENST00000346501 POMGNT2Q8NAT1 580 aa13.95□□□□□ -0.18
TSPAN4-201ENST00000346501 OR2T12Q8NG77 320 aa13.95□□□□□ -0.18
TSPAN4-201ENST00000346501 OR9K2Q8NGE7 335 aa13.95□□□□□ -0.18
TSPAN4-201ENST00000346501 VANGL1Q8TAA9 524 aaPredicted RBP13.95□□□□□ -0.18
TSPAN4-201ENST00000346501 LZICQ8WZA0 190 aa13.95□□□□□ -0.18
TSPAN4-201ENST00000346501 TMEM45BQ96B21 275 aa13.95□□□□□ -0.18
TSPAN4-201ENST00000346501 HOPXQ9BPY8 73 aaPredicted RBP13.95□□□□□ -0.18
TSPAN4-201ENST00000346501 ASPNQ9BXN1 380 aa13.95□□□□□ -0.18
TSPAN4-201ENST00000346501 PLEKHF2Q9H8W4 249 aa13.95□□□□□ -0.18
TSPAN4-201ENST00000346501 B3GALT5Q9Y2C3 310 aa13.95□□□□□ -0.18
TSPAN4-201ENST00000346501 CORINQ9Y5Q5 1042 aa13.95□□□□□ -0.18
TSPAN4-201ENST00000346501 POLQO75417 2590 aa13.94□□□□□ -0.18
TSPAN4-201ENST00000346501 A0A087WUJ7 227 aa13.94□□□□□ -0.18
TSPAN4-201ENST00000346501 FAM220BPB1ANY3 271 aa13.94□□□□□ -0.18
TSPAN4-201ENST00000346501 M0R3H8 397 aa13.94□□□□□ -0.18
TSPAN4-201ENST00000346501 GSTA4O15217 222 aa13.94□□□□□ -0.18
TSPAN4-201ENST00000346501 RAMP1O60894 148 aa13.94□□□□□ -0.18
TSPAN4-201ENST00000346501 NQO1P15559 274 aaKnown RBP13.94□□□□□ -0.18
TSPAN4-201ENST00000346501 HTR2AP28223 471 aa13.94□□□□□ -0.18
TSPAN4-201ENST00000346501 PPA1Q15181 289 aa13.94□□□□□ -0.18
TSPAN4-201ENST00000346501 TSC22D1Q15714 1073 aa13.94□□□□□ -0.18
TSPAN4-201ENST00000346501 NRF1Q16656 503 aa13.94□□□□□ -0.18
TSPAN4-201ENST00000346501 TIMM23BQ5SRD1 257 aa13.94□□□□□ -0.18
TSPAN4-201ENST00000346501 C20orf204Q6ZNR8 217 aa13.94□□□□□ -0.18
TSPAN4-201ENST00000346501 OR6S1Q8NH40 331 aa13.94□□□□□ -0.18
TSPAN4-201ENST00000346501 PIGTQ969N2 578 aa13.94□□□□□ -0.18
TSPAN4-201ENST00000346501 KTI12Q96EK9 354 aaPredicted RBP13.94□□□□□ -0.18
TSPAN4-201ENST00000346501 PLPPR2Q96GM1 343 aa13.94□□□□□ -0.18
TSPAN4-201ENST00000346501 ARHGDIGQ99819 225 aa13.94□□□□□ -0.18
TSPAN4-201ENST00000346501 FOXC2Q99958 501 aa13.94□□□□□ -0.18
TSPAN4-201ENST00000346501 UBTD1Q9HAC8 227 aa13.94□□□□□ -0.18
TSPAN4-201ENST00000346501 MALT1Q9UDY8 824 aa13.94□□□□□ -0.18
TSPAN4-201ENST00000346501 A0A0B4J2E0 115 aa13.93□□□□□ -0.18
TSPAN4-201ENST00000346501 A0A1B0GX12 115 aa13.93□□□□□ -0.18
TSPAN4-201ENST00000346501 ELOVL7A1L3X0 281 aa13.93□□□□□ -0.18
TSPAN4-201ENST00000346501 TRAPPC13A5PLN9 417 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms