RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 C6orf203Q9P0P8 240 aaPredicted RBP10.6□□□□□ -0.71
SNCA-202ENST00000345009 KLHL9Q9P2J3 617 aa10.6□□□□□ -0.71
SNCA-202ENST00000345009 EMC9Q9Y3B6 208 aa10.6□□□□□ -0.71
SNCA-202ENST00000345009 ENPP4Q9Y6X5 453 aa10.6□□□□□ -0.71
SNCA-202ENST00000345009 A0A0G2JNJ9 132 aa10.59□□□□□ -0.71
SNCA-202ENST00000345009 WIPF3A6NGB9 483 aa10.59□□□□□ -0.71
SNCA-202ENST00000345009 LIPT2A6NK58 231 aa10.59□□□□□ -0.71
SNCA-202ENST00000345009 AQP12BA6NM10 295 aa10.59□□□□□ -0.71
SNCA-202ENST00000345009 NPIPB7O75200 414 aa10.59□□□□□ -0.71
SNCA-202ENST00000345009 CIB2O75838 187 aa10.59□□□□□ -0.71
SNCA-202ENST00000345009 VAMP5O95183 116 aa10.59□□□□□ -0.71
SNCA-202ENST00000345009 TGM6O95932 706 aa10.59□□□□□ -0.71
SNCA-202ENST00000345009 MT-ATP6P00846 226 aa10.59□□□□□ -0.71
SNCA-202ENST00000345009 HIST1H2ABP04908 130 aa10.59□□□□□ -0.71
SNCA-202ENST00000345009 UMPSP11172 480 aa10.59□□□□□ -0.71
SNCA-202ENST00000345009 FPR1P21462 350 aa10.59□□□□□ -0.71
SNCA-202ENST00000345009 FLOT2Q14254 428 aa10.59□□□□□ -0.71
SNCA-202ENST00000345009 TRAM2Q15035 370 aa10.59□□□□□ -0.71
SNCA-202ENST00000345009 OR7A5Q15622 319 aa10.59□□□□□ -0.71
SNCA-202ENST00000345009 SLC25A35Q3KQZ1 300 aa10.59□□□□□ -0.71
SNCA-202ENST00000345009 TMEM201Q5SNT2 666 aa10.59□□□□□ -0.71
SNCA-202ENST00000345009 FAM69AQ5T7M9 428 aa10.59□□□□□ -0.71
SNCA-202ENST00000345009 TMEM225Q6GV28 225 aa10.59□□□□□ -0.71
SNCA-202ENST00000345009 PGM2L1Q6PCE3 622 aa10.59□□□□□ -0.71
SNCA-202ENST00000345009 PAQR6Q6TCH4 344 aa10.59□□□□□ -0.71
SNCA-202ENST00000345009 LINC00114Q6XXX2 140 aa10.59□□□□□ -0.71
SNCA-202ENST00000345009 HIST3H2AQ7L7L0 130 aa10.59□□□□□ -0.71
SNCA-202ENST00000345009 GDF7Q7Z4P5 450 aa10.59□□□□□ -0.71
SNCA-202ENST00000345009 AQP12AQ8IXF9 295 aa10.59□□□□□ -0.71
SNCA-202ENST00000345009 CDK20Q8IZL9 346 aa10.59□□□□□ -0.71
SNCA-202ENST00000345009 RPRMLQ8N4K4 120 aa10.59□□□□□ -0.71
SNCA-202ENST00000345009 MARVELD2Q8N4S9 558 aa10.59□□□□□ -0.71
SNCA-202ENST00000345009 C9orf106Q8NAJ2 232 aa10.59□□□□□ -0.71
SNCA-202ENST00000345009 OR6S1Q8NH40 331 aa10.59□□□□□ -0.71
SNCA-202ENST00000345009 LILRB4Q8NHJ6 448 aa10.59□□□□□ -0.71
SNCA-202ENST00000345009 PIGXQ8TBF5 258 aa10.59□□□□□ -0.71
SNCA-202ENST00000345009 HIST1H2ACQ93077 130 aa10.59□□□□□ -0.71
SNCA-202ENST00000345009 SLC25A36Q96CQ1 311 aa10.59□□□□□ -0.71
SNCA-202ENST00000345009 ASPNQ9BXN1 380 aa10.59□□□□□ -0.71
SNCA-202ENST00000345009 CADM1Q9BY67 442 aaKnown RBP10.59□□□□□ -0.71
SNCA-202ENST00000345009 AMBRA1Q9C0C7 1298 aa10.59□□□□□ -0.71
SNCA-202ENST00000345009 PIGMQ9H3S5 423 aa10.59□□□□□ -0.71
SNCA-202ENST00000345009 MAGIXQ9H6Y5 334 aa10.59□□□□□ -0.71
SNCA-202ENST00000345009 COQ10BQ9H8M1 238 aa10.59□□□□□ -0.71
SNCA-202ENST00000345009 IL1RAPQ9NPH3 570 aa10.59□□□□□ -0.71
SNCA-202ENST00000345009 FANCFQ9NPI8 374 aa10.59□□□□□ -0.71
SNCA-202ENST00000345009 KCNJ16Q9NPI9 418 aa10.59□□□□□ -0.71
SNCA-202ENST00000345009 Q9UFV3 132 aa10.59□□□□□ -0.71
SNCA-202ENST00000345009 RNF6Q9Y252 685 aa10.59□□□□□ -0.71
SNCA-202ENST00000345009 CORINQ9Y5Q5 1042 aa10.59□□□□□ -0.71
SNCA-202ENST00000345009 V9GYQ6 96 aa10.59□□□□□ -0.71
SNCA-202ENST00000345009 COL12A1Q99715 3063 aa10.59□□□□□ -0.71
SNCA-202ENST00000345009 ZC3H12DA2A288 527 aaKnown RBP10.58□□□□□ -0.72
SNCA-202ENST00000345009 CLEC18AA5D8T8 446 aa10.58□□□□□ -0.72
SNCA-202ENST00000345009 GPR171O14626 319 aa10.58□□□□□ -0.72
SNCA-202ENST00000345009 AQP8O94778 261 aa10.58□□□□□ -0.72
SNCA-202ENST00000345009 TOXO94900 526 aa10.58□□□□□ -0.72
SNCA-202ENST00000345009 FABP3P05413 133 aa10.58□□□□□ -0.72
SNCA-202ENST00000345009 RPS5P46782 204 aaKnown RBP10.58□□□□□ -0.72
SNCA-202ENST00000345009 YAP1P46937 504 aaKnown RBP10.58□□□□□ -0.72
SNCA-202ENST00000345009 ADORA2A-AS1P86434 159 aa10.58□□□□□ -0.72
SNCA-202ENST00000345009 MS4A2Q01362 244 aa10.58□□□□□ -0.72
SNCA-202ENST00000345009 GABPB1Q06547 395 aaPredicted RBP10.58□□□□□ -0.72
SNCA-202ENST00000345009 RASGEF1BQ0VAM2 473 aa10.58□□□□□ -0.72
SNCA-202ENST00000345009 PDK3Q15120 406 aa10.58□□□□□ -0.72
SNCA-202ENST00000345009 CLEC18BQ6UXF7 455 aa10.58□□□□□ -0.72
SNCA-202ENST00000345009 SEM1Q6ZVN7 128 aa10.58□□□□□ -0.72
SNCA-202ENST00000345009 STK32CQ86UX6 486 aa10.58□□□□□ -0.72
SNCA-202ENST00000345009 CCDC71Q8IV32 467 aaPredicted RBP10.58□□□□□ -0.72
SNCA-202ENST00000345009 C10orf67Q8IYJ2 551 aa10.58□□□□□ -0.72
SNCA-202ENST00000345009 RNF113BQ8IZP6 322 aaKnown RBP10.58□□□□□ -0.72
SNCA-202ENST00000345009 OFCC1Q8IZS5 231 aa10.58□□□□□ -0.72
SNCA-202ENST00000345009 GCNT2Q8N0V5 402 aa10.58□□□□□ -0.72
SNCA-202ENST00000345009 CNEP1R1Q8N9A8 125 aa10.58□□□□□ -0.72
SNCA-202ENST00000345009 CLEC18CQ8NCF0 446 aa10.58□□□□□ -0.72
SNCA-202ENST00000345009 RNF128Q8TEB7 428 aa10.58□□□□□ -0.72
SNCA-202ENST00000345009 TMEM239Q8WW34 195 aa10.58□□□□□ -0.72
SNCA-202ENST00000345009 ROBO4Q8WZ75 1007 aa10.58□□□□□ -0.72
SNCA-202ENST00000345009 KTI12Q96EK9 354 aaPredicted RBP10.58□□□□□ -0.72
SNCA-202ENST00000345009 POM121Q96HA1 1249 aa10.58□□□□□ -0.72
SNCA-202ENST00000345009 ZNF300Q96RE9 604 aaPredicted RBP10.58□□□□□ -0.72
SNCA-202ENST00000345009 SEPHS2Q99611 448 aa10.58□□□□□ -0.72
SNCA-202ENST00000345009 SRXN1Q9BYN0 137 aa10.58□□□□□ -0.72
SNCA-202ENST00000345009 ANKRD19PQ9H560 264 aa10.58□□□□□ -0.72
SNCA-202ENST00000345009 YY1AP1Q9H869 796 aa10.58□□□□□ -0.72
SNCA-202ENST00000345009 KRCC1Q9NPI7 259 aaPredicted RBP10.58□□□□□ -0.72
SNCA-202ENST00000345009 NDUFAF4Q9P032 175 aa10.58□□□□□ -0.72
SNCA-202ENST00000345009 A4GNTQ9UNA3 340 aa10.58□□□□□ -0.72
SNCA-202ENST00000345009 POMPQ9Y244 141 aa10.58□□□□□ -0.72
SNCA-202ENST00000345009 MED31Q9Y3C7 131 aa10.58□□□□□ -0.72
SNCA-202ENST00000345009 USP9YO00507 2555 aaPredicted RBP10.58□□□□□ -0.72
SNCA-202ENST00000345009 INTS1Q8N201 2190 aaKnown RBP10.58□□□□□ -0.72
SNCA-202ENST00000345009 DOCK7Q96N67 2140 aa10.57□□□□□ -0.72
SNCA-202ENST00000345009 A0A1W2PRQ8 180 aa10.57□□□□□ -0.72
SNCA-202ENST00000345009 ACOT8O14734 319 aa10.57□□□□□ -0.72
SNCA-202ENST00000345009 CYTIPO60759 359 aa10.57□□□□□ -0.72
SNCA-202ENST00000345009 KRT36O76013 467 aa10.57□□□□□ -0.72
SNCA-202ENST00000345009 OR6A2O95222 327 aa10.57□□□□□ -0.72
SNCA-202ENST00000345009 CLDN14O95500 239 aa10.57□□□□□ -0.72
SNCA-202ENST00000345009 H1F0P07305 194 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms