RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 DGCR2P98153 550 aa16.82■□□□□ 0.28
SMC4-201ENST00000344722 DPPA4Q7L190 304 aa16.82■□□□□ 0.28
SMC4-201ENST00000344722 P4HA3Q7Z4N8 544 aa16.82■□□□□ 0.28
SMC4-201ENST00000344722 MIB2Q96AX9 1013 aa16.82■□□□□ 0.28
SMC4-201ENST00000344722 ZNF768Q9H5H4 540 aaKnown RBP16.82■□□□□ 0.28
SMC4-201ENST00000344722 NARFLQ9H6Q4 476 aa16.82■□□□□ 0.28
SMC4-201ENST00000344722 LHX3Q9UBR4 397 aa16.82■□□□□ 0.28
SMC4-201ENST00000344722 RHBDD3Q9Y3P4 386 aa16.82■□□□□ 0.28
SMC4-201ENST00000344722 A8MXE2 369 aa16.82■□□□□ 0.28
SMC4-201ENST00000344722 FZD9O00144 591 aa16.82■□□□□ 0.28
SMC4-201ENST00000344722 CX3CR1P49238 355 aa16.82■□□□□ 0.28
SMC4-201ENST00000344722 EMP2P54851 167 aa16.82■□□□□ 0.28
SMC4-201ENST00000344722 PRICKLE2Q7Z3G6 844 aa16.82■□□□□ 0.28
SMC4-201ENST00000344722 CMIPQ8IY22 773 aa16.82■□□□□ 0.28
SMC4-201ENST00000344722 OR2A12Q8NGT7 310 aa16.82■□□□□ 0.28
SMC4-201ENST00000344722 C11orf84Q9BUA3 381 aaPredicted RBP16.82■□□□□ 0.28
SMC4-201ENST00000344722 OR52A5Q9H2C5 316 aa16.82■□□□□ 0.28
SMC4-201ENST00000344722 POFUT1Q9H488 388 aa16.82■□□□□ 0.28
SMC4-201ENST00000344722 ELOVL3Q9HB03 270 aa16.82■□□□□ 0.28
SMC4-201ENST00000344722 SIDT1Q9NXL6 827 aaKnown RBP16.82■□□□□ 0.28
SMC4-201ENST00000344722 HBE1P02100 147 aa16.82■□□□□ 0.28
SMC4-201ENST00000344722 CTHP32929 405 aa16.82■□□□□ 0.28
SMC4-201ENST00000344722 MFGE8Q08431 387 aaPredicted RBP16.82■□□□□ 0.28
SMC4-201ENST00000344722 CD300CQ08708 224 aa16.82■□□□□ 0.28
SMC4-201ENST00000344722 RTP2Q5QGT7 225 aa16.82■□□□□ 0.28
SMC4-201ENST00000344722 ALKAL1Q6UXT8 129 aa16.82■□□□□ 0.28
SMC4-201ENST00000344722 LIX1LQ8IVB5 337 aa16.82■□□□□ 0.28
SMC4-201ENST00000344722 UBR2Q8IWV8 1755 aa16.82■□□□□ 0.28
SMC4-201ENST00000344722 SLC43A2Q8N370 569 aa16.82■□□□□ 0.28
SMC4-201ENST00000344722 TTC9BQ8N6N2 239 aa16.82■□□□□ 0.28
SMC4-201ENST00000344722 GAREM1Q9H706 876 aa16.82■□□□□ 0.28
SMC4-201ENST00000344722 CIB4A0PJX0 185 aa16.81■□□□□ 0.28
SMC4-201ENST00000344722 VSTM2BA6NLU5 285 aa16.81■□□□□ 0.28
SMC4-201ENST00000344722 ZNF888P0CJ79 500 aaPredicted RBP16.81■□□□□ 0.28
SMC4-201ENST00000344722 HIST1H1TP22492 207 aaPredicted RBP16.81■□□□□ 0.28
SMC4-201ENST00000344722 CPT2P23786 658 aa16.81■□□□□ 0.28
SMC4-201ENST00000344722 CRHR2Q13324 411 aa16.81■□□□□ 0.28
SMC4-201ENST00000344722 FIGLAQ6QHK4 219 aa16.81■□□□□ 0.28
SMC4-201ENST00000344722 SLC2A12Q8TD20 617 aa16.81■□□□□ 0.28
SMC4-201ENST00000344722 HHATLQ9HCP6 504 aa16.81■□□□□ 0.28
SMC4-201ENST00000344722 ABI3Q9P2A4 366 aa16.81■□□□□ 0.28
SMC4-201ENST00000344722 OR8G3PP0DMU2 310 aa16.81■□□□□ 0.28
SMC4-201ENST00000344722 CALCBP10092 127 aa16.81■□□□□ 0.28
SMC4-201ENST00000344722 CD53P19397 219 aa16.81■□□□□ 0.28
SMC4-201ENST00000344722 DAP3P51398 398 aaKnown RBP16.81■□□□□ 0.28
SMC4-201ENST00000344722 ZNF136P52737 540 aa16.81■□□□□ 0.28
SMC4-201ENST00000344722 BDH1Q02338 343 aa16.81■□□□□ 0.28
SMC4-201ENST00000344722 NUDT8Q8WV74 236 aa16.81■□□□□ 0.28
SMC4-201ENST00000344722 RAB39BQ96DA2 213 aa16.81■□□□□ 0.28
SMC4-201ENST00000344722 EHFQ9NZC4 300 aa16.81■□□□□ 0.28
SMC4-201ENST00000344722 ATXN7L1Q9ULK2 861 aaPredicted RBP16.81■□□□□ 0.28
SMC4-201ENST00000344722 SLC22A7Q9Y694 548 aa16.81■□□□□ 0.28
SMC4-201ENST00000344722 SNRPGP15A8MWD9 76 aa16.81■□□□□ 0.28
SMC4-201ENST00000344722 CTSCP53634 463 aa16.81■□□□□ 0.28
SMC4-201ENST00000344722 BAMBIQ13145 260 aa16.81■□□□□ 0.28
SMC4-201ENST00000344722 FRMD1Q8N878 549 aa16.81■□□□□ 0.28
SMC4-201ENST00000344722 ASB13Q8WXK3 278 aa16.81■□□□□ 0.28
SMC4-201ENST00000344722 DDIT4LQ96D03 193 aa16.81■□□□□ 0.28
SMC4-201ENST00000344722 UNCXA6NJT0 531 aa16.81■□□□□ 0.28
SMC4-201ENST00000344722 HSBP1L1C9JCN9 74 aa16.81■□□□□ 0.28
SMC4-201ENST00000344722 KLK8O60259 260 aa16.81■□□□□ 0.28
SMC4-201ENST00000344722 ALKBH2Q6NS38 261 aa16.81■□□□□ 0.28
SMC4-201ENST00000344722 SLCO4C1Q6ZQN7 724 aa16.81■□□□□ 0.28
SMC4-201ENST00000344722 CXXC1Q9P0U4 656 aaPredicted RBP16.81■□□□□ 0.28
SMC4-201ENST00000344722 REV1Q9UBZ9 1251 aa16.81■□□□□ 0.28
SMC4-201ENST00000344722 MSRAQ9UJ68 235 aa16.81■□□□□ 0.28
SMC4-201ENST00000344722 THBS2P35442 1172 aa16.8■□□□□ 0.28
SMC4-201ENST00000344722 CDK3Q00526 305 aa16.8■□□□□ 0.28
SMC4-201ENST00000344722 ACVR1Q04771 509 aa16.8■□□□□ 0.28
SMC4-201ENST00000344722 NFATC4Q14934 902 aa16.8■□□□□ 0.28
SMC4-201ENST00000344722 PAQR6Q6TCH4 344 aa16.8■□□□□ 0.28
SMC4-201ENST00000344722 MEX3BQ6ZN04 569 aaKnown RBP16.8■□□□□ 0.28
SMC4-201ENST00000344722 KLHDC8BQ8IXV7 354 aa16.8■□□□□ 0.28
SMC4-201ENST00000344722 CSF3RQ99062 836 aa16.8■□□□□ 0.28
SMC4-201ENST00000344722 RHNO1Q9BSD3 238 aa16.8■□□□□ 0.28
SMC4-201ENST00000344722 DKKL1Q9UK85 242 aa16.8■□□□□ 0.28
SMC4-201ENST00000344722 MBLAC1A4D2B0 266 aaPredicted RBP16.8■□□□□ 0.28
SMC4-201ENST00000344722 IGLON5A6NGN9 336 aa16.8■□□□□ 0.28
SMC4-201ENST00000344722 OR5K4A6NMS3 321 aa16.8■□□□□ 0.28
SMC4-201ENST00000344722 FKTNO75072 461 aa16.8■□□□□ 0.28
SMC4-201ENST00000344722 CNKSR3Q6P9H4 555 aa16.8■□□□□ 0.28
SMC4-201ENST00000344722 SLAIN1Q8ND83 568 aa16.8■□□□□ 0.28
SMC4-201ENST00000344722 WDR92Q96MX6 357 aa16.8■□□□□ 0.28
SMC4-201ENST00000344722 GPR34Q9UPC5 381 aa16.8■□□□□ 0.28
SMC4-201ENST00000344722 CCNOP22674 350 aa16.8■□□□□ 0.28
SMC4-201ENST00000344722 MDGA2Q7Z553 956 aa16.8■□□□□ 0.28
SMC4-201ENST00000344722 GLCCI1Q86VQ1 547 aa16.8■□□□□ 0.28
SMC4-201ENST00000344722 METTL27Q8N6F8 245 aaPredicted RBP16.8■□□□□ 0.28
SMC4-201ENST00000344722 SAMD10Q9BYL1 202 aa16.8■□□□□ 0.28
SMC4-201ENST00000344722 C19orf25Q9UFG5 118 aaPredicted RBP16.8■□□□□ 0.28
SMC4-201ENST00000344722 MYO18AQ92614 2054 aaKnown RBP16.8■□□□□ 0.28
SMC4-201ENST00000344722 STK17BO94768 372 aa16.8■□□□□ 0.28
SMC4-201ENST00000344722 SLC14A1Q13336 389 aa16.8■□□□□ 0.28
SMC4-201ENST00000344722 MRPL2Q5T653 305 aaKnown RBP16.8■□□□□ 0.28
SMC4-201ENST00000344722 KDM8Q8N371 416 aa16.8■□□□□ 0.28
SMC4-201ENST00000344722 ZSCAN4Q8NAM6 433 aaPredicted RBP16.8■□□□□ 0.28
SMC4-201ENST00000344722 OR52I2Q8NH67 350 aa16.8■□□□□ 0.28
SMC4-201ENST00000344722 NANPQ8TBE9 248 aa16.8■□□□□ 0.28
SMC4-201ENST00000344722 TMEM106AQ96A25 262 aa16.8■□□□□ 0.28
SMC4-201ENST00000344722 WDFY2Q96P53 400 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms