RNA–Protein interactions for RNA: ENST00000341423.9

HMGB1-203, Transcript of high mobility group box 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB1, Length 5,485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1-203ENST00000341423 BCL2L15Q5TBC7 163 aa7.7□□□□□ -1.18
HMGB1-203ENST00000341423 MDGA2Q7Z553 956 aa7.7□□□□□ -1.18
HMGB1-203ENST00000341423 SLC38A6Q8IZM9 456 aa7.7□□□□□ -1.18
HMGB1-203ENST00000341423 MREGQ8N565 214 aa7.7□□□□□ -1.18
HMGB1-203ENST00000341423 LINC01465Q8N7H1 131 aa7.7□□□□□ -1.18
HMGB1-203ENST00000341423 NEU4Q8WWR8 484 aaPredicted RBP7.7□□□□□ -1.18
HMGB1-203ENST00000341423 APIPQ96GX9 242 aa7.7□□□□□ -1.18
HMGB1-203ENST00000341423 GRAMD2BQ96HH9 432 aa7.7□□□□□ -1.18
HMGB1-203ENST00000341423 MAPKAP1Q9BPZ7 522 aa7.7□□□□□ -1.18
HMGB1-203ENST00000341423 TNFRSF10DQ9UBN6 386 aa7.7□□□□□ -1.18
HMGB1-203ENST00000341423 TIMM10BQ9Y5J6 103 aa7.7□□□□□ -1.18
HMGB1-203ENST00000341423 POLEQ07864 2286 aa7.7□□□□□ -1.18
HMGB1-203ENST00000341423 INHBBP09529 407 aa7.7□□□□□ -1.18
HMGB1-203ENST00000341423 SLC25A16P16260 332 aa7.7□□□□□ -1.18
HMGB1-203ENST00000341423 CDH12P55289 794 aa7.7□□□□□ -1.18
HMGB1-203ENST00000341423 VBP1P61758 197 aa7.7□□□□□ -1.18
HMGB1-203ENST00000341423 MRPS35P82673 323 aaKnown RBP7.7□□□□□ -1.18
HMGB1-203ENST00000341423 ANKRD37Q7Z713 158 aa7.7□□□□□ -1.18
HMGB1-203ENST00000341423 TP53I13Q8NBR0 393 aaPredicted RBP7.7□□□□□ -1.18
HMGB1-203ENST00000341423 OR2M7Q8NG81 312 aa7.7□□□□□ -1.18
HMGB1-203ENST00000341423 FBXO27Q8NI29 283 aa7.7□□□□□ -1.18
HMGB1-203ENST00000341423 UBASH3BQ8TF42 649 aa7.7□□□□□ -1.18
HMGB1-203ENST00000341423 MAELQ96JY0 434 aaKnown RBP7.7□□□□□ -1.18
HMGB1-203ENST00000341423 RASL11BQ9BPW5 248 aa7.7□□□□□ -1.18
HMGB1-203ENST00000341423 VN1R1Q9GZP7 353 aa7.7□□□□□ -1.18
HMGB1-203ENST00000341423 HHLA1C9JL84 531 aa7.7□□□□□ -1.18
HMGB1-203ENST00000341423 SOCS2O14508 198 aa7.7□□□□□ -1.18
HMGB1-203ENST00000341423 EREGO14944 169 aa7.7□□□□□ -1.18
HMGB1-203ENST00000341423 P2RX1P51575 399 aa7.7□□□□□ -1.18
HMGB1-203ENST00000341423 GYS2P54840 703 aa7.7□□□□□ -1.18
HMGB1-203ENST00000341423 RPL19P84098 196 aaKnown RBP7.7□□□□□ -1.18
HMGB1-203ENST00000341423 ARL6IP1Q15041 203 aa7.7□□□□□ -1.18
HMGB1-203ENST00000341423 FXNQ16595 210 aa7.7□□□□□ -1.18
HMGB1-203ENST00000341423 OR5M1Q8NGP8 315 aa7.7□□□□□ -1.18
HMGB1-203ENST00000341423 WNT2BQ93097 391 aa7.7□□□□□ -1.18
HMGB1-203ENST00000341423 RSPRY1Q96DX4 576 aa7.7□□□□□ -1.18
HMGB1-203ENST00000341423 SIAEQ9HAT2 523 aa7.7□□□□□ -1.18
HMGB1-203ENST00000341423 CACNG2Q9Y698 323 aa7.7□□□□□ -1.18
HMGB1-203ENST00000341423 CXorf51AA0A1B0GTR3 108 aa7.69□□□□□ -1.18
HMGB1-203ENST00000341423 OR5H14A6NHG9 310 aa7.69□□□□□ -1.18
HMGB1-203ENST00000341423 OR5H1A6NKK0 313 aa7.69□□□□□ -1.18
HMGB1-203ENST00000341423 CLIC1O00299 241 aa7.69□□□□□ -1.18
HMGB1-203ENST00000341423 SOCS6O14544 535 aa7.69□□□□□ -1.18
HMGB1-203ENST00000341423 TNFSF11O14788 317 aa7.69□□□□□ -1.18
HMGB1-203ENST00000341423 AQP8O94778 261 aa7.69□□□□□ -1.18
HMGB1-203ENST00000341423 HTR3BO95264 441 aa7.69□□□□□ -1.18
HMGB1-203ENST00000341423 GNRHRP30968 328 aa7.69□□□□□ -1.18
HMGB1-203ENST00000341423 CSNK1G2P78368 415 aa7.69□□□□□ -1.18
HMGB1-203ENST00000341423 PCGF3Q3KNV8 242 aa7.69□□□□□ -1.18
HMGB1-203ENST00000341423 CCDC144NLQ6NUI1 221 aa7.69□□□□□ -1.18
HMGB1-203ENST00000341423 SSX6Q7RTT6 188 aa7.69□□□□□ -1.18
HMGB1-203ENST00000341423 PPP1R32Q7Z5V6 425 aa7.69□□□□□ -1.18
HMGB1-203ENST00000341423 BIVMQ86UB2 503 aa7.69□□□□□ -1.18
HMGB1-203ENST00000341423 ZNF709Q8N972 641 aa7.69□□□□□ -1.18
HMGB1-203ENST00000341423 PAQR8Q8TEZ7 354 aa7.69□□□□□ -1.18
HMGB1-203ENST00000341423 GEMIN6Q8WXD5 167 aaKnown RBP7.69□□□□□ -1.18
HMGB1-203ENST00000341423 ITFG2Q969R8 447 aa7.69□□□□□ -1.18
HMGB1-203ENST00000341423 UTP4Q969X6 686 aaKnown RBP7.69□□□□□ -1.18
HMGB1-203ENST00000341423 RRNAD1Q96FB5 475 aaKnown RBP7.69□□□□□ -1.18
HMGB1-203ENST00000341423 GMPPAQ96IJ6 420 aaPredicted RBP7.69□□□□□ -1.18
HMGB1-203ENST00000341423 MRGPRX4Q96LA9 322 aa7.69□□□□□ -1.18
HMGB1-203ENST00000341423 COQ10AQ96MF6 247 aa7.69□□□□□ -1.18
HMGB1-203ENST00000341423 SCGB3A2Q96PL1 93 aa7.69□□□□□ -1.18
HMGB1-203ENST00000341423 C7orf50Q9BRJ6 194 aaKnown RBP7.69□□□□□ -1.18
HMGB1-203ENST00000341423 AIFM2Q9BRQ8 373 aa7.69□□□□□ -1.18
HMGB1-203ENST00000341423 POTEKPQ9BYX7 375 aa7.69□□□□□ -1.18
HMGB1-203ENST00000341423 NPFFR1Q9GZQ6 430 aa7.69□□□□□ -1.18
HMGB1-203ENST00000341423 ZMAT4Q9H898 229 aa7.69□□□□□ -1.18
HMGB1-203ENST00000341423 MGAT4CQ9UBM8 478 aa7.69□□□□□ -1.18
HMGB1-203ENST00000341423 PPP1R3CQ9UQK1 317 aa7.69□□□□□ -1.18
HMGB1-203ENST00000341423 NME7Q9Y5B8 376 aa7.69□□□□□ -1.18
HMGB1-203ENST00000341423 DOK2O60496 412 aa7.69□□□□□ -1.18
HMGB1-203ENST00000341423 OLFM2O95897 454 aa7.69□□□□□ -1.18
HMGB1-203ENST00000341423 ZNF182P17025 639 aaPredicted RBP7.69□□□□□ -1.18
HMGB1-203ENST00000341423 USF1P22415 310 aaPredicted RBP7.69□□□□□ -1.18
HMGB1-203ENST00000341423 PPICP45877 212 aa7.69□□□□□ -1.18
HMGB1-203ENST00000341423 ZNF273Q14593 569 aa7.69□□□□□ -1.18
HMGB1-203ENST00000341423 OR4F5Q8NH21 305 aa7.69□□□□□ -1.18
HMGB1-203ENST00000341423 MSI2Q96DH6 328 aaKnown RBP7.69□□□□□ -1.18
HMGB1-203ENST00000341423 NUDT16L1Q9BRJ7 211 aaKnown RBP7.69□□□□□ -1.18
HMGB1-203ENST00000341423 SEMA4CQ9C0C4 833 aa7.69□□□□□ -1.18
HMGB1-203ENST00000341423 ADAM29Q9UKF5 820 aa7.69□□□□□ -1.18
HMGB1-203ENST00000341423 LOC110117498-PIK3R3F6TDL0 507 aa7.69□□□□□ -1.18
HMGB1-203ENST00000341423 IFNL4K9M1U5 179 aa7.69□□□□□ -1.18
HMGB1-203ENST00000341423 PIPP12273 146 aaPredicted RBP7.69□□□□□ -1.18
HMGB1-203ENST00000341423 ACADSP16219 412 aa7.69□□□□□ -1.18
HMGB1-203ENST00000341423 VDAC1P21796 283 aa7.69□□□□□ -1.18
HMGB1-203ENST00000341423 GSK3AP49840 483 aa7.69□□□□□ -1.18
HMGB1-203ENST00000341423 PNLIPRP2P54317 469 aa7.69□□□□□ -1.18
HMGB1-203ENST00000341423 QPRTQ15274 297 aa7.69□□□□□ -1.18
HMGB1-203ENST00000341423 CLEC12AQ5QGZ9 265 aa7.69□□□□□ -1.18
HMGB1-203ENST00000341423 HENMT1Q5T8I9 393 aaKnown RBP7.69□□□□□ -1.18
HMGB1-203ENST00000341423 COMMD6Q7Z4G1 85 aa7.69□□□□□ -1.18
HMGB1-203ENST00000341423 RNF130Q86XS8 419 aa7.69□□□□□ -1.18
HMGB1-203ENST00000341423 C1orf174Q8IYL3 243 aa7.69□□□□□ -1.18
HMGB1-203ENST00000341423 PIK3R3Q92569 461 aa7.69□□□□□ -1.18
HMGB1-203ENST00000341423 POM121Q96HA1 1249 aa7.69□□□□□ -1.18
HMGB1-203ENST00000341423 NELFAQ9H3P2 528 aa7.69□□□□□ -1.18
HMGB1-203ENST00000341423 FAM230AA0A1W2PPH8 454 aa7.69□□□□□ -1.18
HMGB1-203ENST00000341423 TEX46H3BTG2 121 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms