RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 NPTX1Q15818 432 aa13.64□□□□□ -0.23
VAPA-201ENST00000340541 NRF1Q16656 503 aa13.64□□□□□ -0.23
VAPA-201ENST00000340541 C1orf140Q5VVS0 124 aa13.64□□□□□ -0.23
VAPA-201ENST00000340541 PAQR6Q6TCH4 344 aa13.64□□□□□ -0.23
VAPA-201ENST00000340541 STK32CQ86UX6 486 aa13.64□□□□□ -0.23
VAPA-201ENST00000340541 OR4D11Q8NGI4 311 aa13.64□□□□□ -0.23
VAPA-201ENST00000340541 PIGXQ8TBF5 258 aa13.64□□□□□ -0.23
VAPA-201ENST00000340541 STK35Q8TDR2 534 aa13.64□□□□□ -0.23
VAPA-201ENST00000340541 ECSITQ9BQ95 431 aa13.64□□□□□ -0.23
VAPA-201ENST00000340541 PTDSS2Q9BVG9 487 aa13.64□□□□□ -0.23
VAPA-201ENST00000340541 KLHL4Q9C0H6 718 aa13.64□□□□□ -0.23
VAPA-201ENST00000340541 EVA1AQ9H8M9 152 aa13.64□□□□□ -0.23
VAPA-201ENST00000340541 CMTM6Q9NX76 183 aa13.64□□□□□ -0.23
VAPA-201ENST00000340541 NDRG3Q9UGV2 375 aa13.64□□□□□ -0.23
VAPA-201ENST00000340541 ZNF469Q96JG9 3925 aaPredicted RBP13.64□□□□□ -0.23
VAPA-201ENST00000340541 NAV3Q8IVL0 2385 aa13.63□□□□□ -0.23
VAPA-201ENST00000340541 A0A0B4J2E0 115 aa13.63□□□□□ -0.23
VAPA-201ENST00000340541 A0A1B0GX12 115 aa13.63□□□□□ -0.23
VAPA-201ENST00000340541 CCT8L1PA6NM43 557 aa13.63□□□□□ -0.23
VAPA-201ENST00000340541 FTCDNL1E5RQL4 147 aa13.63□□□□□ -0.23
VAPA-201ENST00000340541 M0R3H8 397 aa13.63□□□□□ -0.23
VAPA-201ENST00000340541 AIM2O14862 343 aa13.63□□□□□ -0.23
VAPA-201ENST00000340541 HRGP04196 525 aa13.63□□□□□ -0.23
VAPA-201ENST00000340541 GPIP06744 558 aa13.63□□□□□ -0.23
VAPA-201ENST00000340541 THBDP07204 575 aa13.63□□□□□ -0.23
VAPA-201ENST00000340541 PSMB1P20618 241 aaKnown RBP13.63□□□□□ -0.23
VAPA-201ENST00000340541 VEZF1Q14119 521 aa13.63□□□□□ -0.23
VAPA-201ENST00000340541 OR1Q1Q15612 314 aa13.63□□□□□ -0.23
VAPA-201ENST00000340541 OR7A5Q15622 319 aa13.63□□□□□ -0.23
VAPA-201ENST00000340541 INTS11Q5TA45 600 aaKnown RBP13.63□□□□□ -0.23
VAPA-201ENST00000340541 ANKRD34AQ69YU3 496 aa13.63□□□□□ -0.23
VAPA-201ENST00000340541 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.63□□□□□ -0.23
VAPA-201ENST00000340541 PIGWQ7Z7B1 504 aa13.63□□□□□ -0.23
VAPA-201ENST00000340541 CPLX4Q7Z7G2 160 aa13.63□□□□□ -0.23
VAPA-201ENST00000340541 GALNT5Q7Z7M9 940 aa13.63□□□□□ -0.23
VAPA-201ENST00000340541 BIVMQ86UB2 503 aa13.63□□□□□ -0.23
VAPA-201ENST00000340541 TSPYL5Q86VY4 417 aaPredicted RBP13.63□□□□□ -0.23
VAPA-201ENST00000340541 CXorf67Q86X51 503 aaPredicted RBP13.63□□□□□ -0.23
VAPA-201ENST00000340541 SLC15A3Q8IY34 581 aa13.63□□□□□ -0.23
VAPA-201ENST00000340541 TMEM99Q8N816 258 aa13.63□□□□□ -0.23
VAPA-201ENST00000340541 OR6T1Q8NGN1 323 aa13.63□□□□□ -0.23
VAPA-201ENST00000340541 DNAJA4Q8WW22 397 aaPredicted RBP13.63□□□□□ -0.23
VAPA-201ENST00000340541 KTI12Q96EK9 354 aaPredicted RBP13.63□□□□□ -0.23
VAPA-201ENST00000340541 NSRP1Q9H0G5 558 aaKnown RBP13.63□□□□□ -0.23
VAPA-201ENST00000340541 BEX4Q9NWD9 120 aaPredicted RBP13.63□□□□□ -0.23
VAPA-201ENST00000340541 EMC3Q9P0I2 261 aa13.63□□□□□ -0.23
VAPA-201ENST00000340541 GMPR2Q9P2T1 348 aaKnown RBP13.63□□□□□ -0.23
VAPA-201ENST00000340541 PRSS50Q9UI38 385 aa13.63□□□□□ -0.23
VAPA-201ENST00000340541 A0A1W2PPR1 153 aa13.62□□□□□ -0.23
VAPA-201ENST00000340541 AQP7P3A6NL99 342 aa13.62□□□□□ -0.23
VAPA-201ENST00000340541 ELOA3DA6NLF2 546 aaPredicted RBP13.62□□□□□ -0.23
VAPA-201ENST00000340541 DEFB108AA8MXU0 73 aa13.62□□□□□ -0.23
VAPA-201ENST00000340541 FAM220BPB1ANY3 271 aa13.62□□□□□ -0.23
VAPA-201ENST00000340541 CASKO14936 926 aa13.62□□□□□ -0.23
VAPA-201ENST00000340541 FMO6PO60774 539 aa13.62□□□□□ -0.23
VAPA-201ENST00000340541 AKR7A3O95154 331 aa13.62□□□□□ -0.23
VAPA-201ENST00000340541 SLC17A1Q14916 467 aa13.62□□□□□ -0.23
VAPA-201ENST00000340541 ELOA3BQ3SY89 546 aa13.62□□□□□ -0.23
VAPA-201ENST00000340541 ALG10BQ5I7T1 473 aa13.62□□□□□ -0.23
VAPA-201ENST00000340541 OTUD3Q5T2D3 398 aaPredicted RBP13.62□□□□□ -0.23
VAPA-201ENST00000340541 FAM91A1Q658Y4 838 aa13.62□□□□□ -0.23
VAPA-201ENST00000340541 ERICH5Q6P6B1 374 aa13.62□□□□□ -0.23
VAPA-201ENST00000340541 ULK3Q6PHR2 472 aa13.62□□□□□ -0.23
VAPA-201ENST00000340541 RBM45Q8IUH3 476 aaKnown RBP13.62□□□□□ -0.23
VAPA-201ENST00000340541 ELOA3Q8NG57 546 aa13.62□□□□□ -0.23
VAPA-201ENST00000340541 MFSD8Q8NHS3 518 aa13.62□□□□□ -0.23
VAPA-201ENST00000340541 SLC38A4Q969I6 547 aa13.62□□□□□ -0.23
VAPA-201ENST00000340541 NAA11Q9BSU3 229 aaPredicted RBP13.62□□□□□ -0.23
VAPA-201ENST00000340541 MED18Q9BUE0 208 aa13.62□□□□□ -0.23
VAPA-201ENST00000340541 OR10A4Q9H209 315 aa13.62□□□□□ -0.23
VAPA-201ENST00000340541 RPS6KB2Q9UBS0 482 aa13.62□□□□□ -0.23
VAPA-201ENST00000340541 SLC13A4Q9UKG4 626 aa13.62□□□□□ -0.23
VAPA-201ENST00000340541 GPR52Q9Y2T5 361 aa13.62□□□□□ -0.23
VAPA-201ENST00000340541 FLVCR1Q9Y5Y0 555 aa13.62□□□□□ -0.23
VAPA-201ENST00000340541 FLNAP21333 2647 aaKnown RBP13.61□□□□□ -0.23
VAPA-201ENST00000340541 A0A087WUJ7 227 aa13.61□□□□□ -0.23
VAPA-201ENST00000340541 GPR171O14626 319 aa13.61□□□□□ -0.23
VAPA-201ENST00000340541 LYPD3O95274 346 aa13.61□□□□□ -0.23
VAPA-201ENST00000340541 AHSA1O95433 338 aa13.61□□□□□ -0.23
VAPA-201ENST00000340541 THY1P04216 161 aa13.61□□□□□ -0.23
VAPA-201ENST00000340541 PNMTP11086 282 aa13.61□□□□□ -0.23
VAPA-201ENST00000340541 CD53P19397 219 aa13.61□□□□□ -0.23
VAPA-201ENST00000340541 CRYGSP22914 178 aa13.61□□□□□ -0.23
VAPA-201ENST00000340541 RPS5P46782 204 aaKnown RBP13.61□□□□□ -0.23
VAPA-201ENST00000340541 CDH12P55289 794 aa13.61□□□□□ -0.23
VAPA-201ENST00000340541 TSC22D1Q15714 1073 aa13.61□□□□□ -0.23
VAPA-201ENST00000340541 SFRP5Q5T4F7 317 aa13.61□□□□□ -0.23
VAPA-201ENST00000340541 SHEQ5VZ18 495 aa13.61□□□□□ -0.23
VAPA-201ENST00000340541 HACD2Q6Y1H2 254 aa13.61□□□□□ -0.23
VAPA-201ENST00000340541 Q6ZT83 130 aa13.61□□□□□ -0.23
VAPA-201ENST00000340541 ARPINQ7Z6K5 226 aa13.61□□□□□ -0.23
VAPA-201ENST00000340541 RANBP3LQ86VV4 465 aaPredicted RBP13.61□□□□□ -0.23
VAPA-201ENST00000340541 ZIC4Q8N9L1 334 aa13.61□□□□□ -0.23
VAPA-201ENST00000340541 OR2T12Q8NG77 320 aa13.61□□□□□ -0.23
VAPA-201ENST00000340541 TAAR8Q969N4 342 aa13.61□□□□□ -0.23
VAPA-201ENST00000340541 SLC47A1Q96FL8 570 aa13.61□□□□□ -0.23
VAPA-201ENST00000340541 MCHR1Q99705 422 aa13.61□□□□□ -0.23
VAPA-201ENST00000340541 ACTR6Q9GZN1 396 aa13.61□□□□□ -0.23
VAPA-201ENST00000340541 EFCAB1Q9HAE3 211 aa13.61□□□□□ -0.23
VAPA-201ENST00000340541 TMEM27Q9HBJ8 222 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms