RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 FAM53BQ14153 422 aa13.24□□□□□ -0.29
CPSF7-201ENST00000340437 YOD1Q5VVQ6 348 aaPredicted RBP13.24□□□□□ -0.29
CPSF7-201ENST00000340437 DMKNQ6E0U4 476 aaPredicted RBP13.24□□□□□ -0.29
CPSF7-201ENST00000340437 OR9A4Q8NGU2 314 aa13.24□□□□□ -0.29
CPSF7-201ENST00000340437 OR8S1Q8NH09 359 aa13.24□□□□□ -0.29
CPSF7-201ENST00000340437 SERINC2Q96SA4 455 aa13.24□□□□□ -0.29
CPSF7-201ENST00000340437 LIN7BQ9HAP6 207 aa13.24□□□□□ -0.29
CPSF7-201ENST00000340437 MYEF2Q9P2K5 600 aaKnown RBP13.24□□□□□ -0.29
CPSF7-201ENST00000340437 UBQLN2Q9UHD9 624 aa13.24□□□□□ -0.29
CPSF7-201ENST00000340437 C19orf53Q9UNZ5 99 aaPredicted RBP13.24□□□□□ -0.29
CPSF7-201ENST00000340437 DOK2O60496 412 aa13.24□□□□□ -0.29
CPSF7-201ENST00000340437 IFNA7P01567 189 aa13.24□□□□□ -0.29
CPSF7-201ENST00000340437 F13BP05160 661 aa13.24□□□□□ -0.29
CPSF7-201ENST00000340437 SRMP19623 302 aa13.24□□□□□ -0.29
CPSF7-201ENST00000340437 CAMK2DQ13557 499 aa13.24□□□□□ -0.29
CPSF7-201ENST00000340437 TMEM69Q5SWH9 247 aa13.24□□□□□ -0.29
CPSF7-201ENST00000340437 CD276Q5ZPR3 534 aa13.24□□□□□ -0.29
CPSF7-201ENST00000340437 CDRT4Q8N9R6 151 aa13.24□□□□□ -0.29
CPSF7-201ENST00000340437 SYNPRQ8TBG9 265 aa13.24□□□□□ -0.29
CPSF7-201ENST00000340437 SPACA7Q96KW9 195 aa13.24□□□□□ -0.29
CPSF7-201ENST00000340437 MCCC2Q9HCC0 563 aa13.24□□□□□ -0.29
CPSF7-201ENST00000340437 IL23AQ9NPF7 189 aa13.24□□□□□ -0.29
CPSF7-201ENST00000340437 IFNA16P05015 189 aa13.23□□□□□ -0.29
CPSF7-201ENST00000340437 C5AR1P21730 350 aa13.23□□□□□ -0.29
CPSF7-201ENST00000340437 PSMA6P60900 246 aaKnown RBP13.23□□□□□ -0.29
CPSF7-201ENST00000340437 MAT1AQ00266 395 aaKnown RBP13.23□□□□□ -0.29
CPSF7-201ENST00000340437 RIN1Q13671 783 aa13.23□□□□□ -0.29
CPSF7-201ENST00000340437 GPR18Q14330 331 aa13.23□□□□□ -0.29
CPSF7-201ENST00000340437 TCTE1Q5JU00 501 aa13.23□□□□□ -0.29
CPSF7-201ENST00000340437 RIT1Q92963 219 aa13.23□□□□□ -0.29
CPSF7-201ENST00000340437 UBL7Q96S82 380 aaPredicted RBP13.23□□□□□ -0.29
CPSF7-201ENST00000340437 TMEM138Q9NPI0 162 aa13.23□□□□□ -0.29
CPSF7-201ENST00000340437 HRASLS2Q9NWW9 162 aa13.23□□□□□ -0.29
CPSF7-201ENST00000340437 TAS2R10Q9NYW0 307 aa13.23□□□□□ -0.29
CPSF7-201ENST00000340437 URADA6NGE7 173 aa13.23□□□□□ -0.29
CPSF7-201ENST00000340437 GPANK1O95872 356 aa13.23□□□□□ -0.29
CPSF7-201ENST00000340437 SERPINA3P01011 423 aa13.23□□□□□ -0.29
CPSF7-201ENST00000340437 TPOP07202 933 aa13.23□□□□□ -0.29
CPSF7-201ENST00000340437 BDH1Q02338 343 aa13.23□□□□□ -0.29
CPSF7-201ENST00000340437 CDK5R1Q15078 307 aa13.23□□□□□ -0.29
CPSF7-201ENST00000340437 LEG1Q6P5S2 330 aa13.23□□□□□ -0.29
CPSF7-201ENST00000340437 ALKAL2Q6UX46 152 aa13.23□□□□□ -0.29
CPSF7-201ENST00000340437 ABHD13Q7L211 337 aa13.23□□□□□ -0.29
CPSF7-201ENST00000340437 ADAD1Q96M93 576 aaKnown RBP13.23□□□□□ -0.29
CPSF7-201ENST00000340437 OR2A5Q96R48 311 aa13.23□□□□□ -0.29
CPSF7-201ENST00000340437 ZNF436Q9C0F3 470 aaPredicted RBP13.23□□□□□ -0.29
CPSF7-201ENST00000340437 NOX3Q9HBY0 568 aa13.23□□□□□ -0.29
CPSF7-201ENST00000340437 TCF7L1Q9HCS4 588 aa13.23□□□□□ -0.29
CPSF7-201ENST00000340437 HRASLSQ9HDD0 168 aa13.23□□□□□ -0.29
CPSF7-201ENST00000340437 CACNA1EQ15878 2313 aa13.23□□□□□ -0.29
CPSF7-201ENST00000340437 TMEM72A0PK05 275 aa13.23□□□□□ -0.29
CPSF7-201ENST00000340437 LINC01553A4QN01 128 aa13.23□□□□□ -0.29
CPSF7-201ENST00000340437 HCRTR1O43613 425 aa13.23□□□□□ -0.29
CPSF7-201ENST00000340437 TMIGD3P0DMS9 266 aaPredicted RBP13.23□□□□□ -0.29
CPSF7-201ENST00000340437 RPS15P62841 145 aaKnown RBP13.23□□□□□ -0.29
CPSF7-201ENST00000340437 ZNF776Q68DI1 518 aaPredicted RBP13.23□□□□□ -0.29
CPSF7-201ENST00000340437 C11orf88Q6PI97 169 aa13.23□□□□□ -0.29
CPSF7-201ENST00000340437 KIRREL2Q6UWL6 708 aa13.23□□□□□ -0.29
CPSF7-201ENST00000340437 NHLRC1Q6VVB1 395 aa13.23□□□□□ -0.29
CPSF7-201ENST00000340437 TMPRSS12Q86WS5 348 aa13.23□□□□□ -0.29
CPSF7-201ENST00000340437 RBM18Q96H35 190 aaKnown RBP13.23□□□□□ -0.29
CPSF7-201ENST00000340437 ACTR10Q9NZ32 417 aa13.23□□□□□ -0.29
CPSF7-201ENST00000340437 NCDNQ9UBB6 729 aa13.23□□□□□ -0.29
CPSF7-201ENST00000340437 ST6GALNAC2Q9UJ37 374 aa13.23□□□□□ -0.29
CPSF7-201ENST00000340437 ELF5Q9UKW6 265 aaPredicted RBP13.23□□□□□ -0.29
CPSF7-201ENST00000340437 SLC22A7Q9Y694 548 aa13.23□□□□□ -0.29
CPSF7-201ENST00000340437 KIAA1549LQ6ZVL6 1849 aa13.22□□□□□ -0.29
CPSF7-201ENST00000340437 FXYD6-FXYD2A0A087WZ82 144 aa13.22□□□□□ -0.29
CPSF7-201ENST00000340437 CCR9P51686 369 aa13.22□□□□□ -0.29
CPSF7-201ENST00000340437 ZP1P60852 638 aa13.22□□□□□ -0.29
CPSF7-201ENST00000340437 SFRP5Q5T4F7 317 aa13.22□□□□□ -0.29
CPSF7-201ENST00000340437 STPG1Q5TH74 334 aa13.22□□□□□ -0.29
CPSF7-201ENST00000340437 BTN2A1Q7KYR7 527 aa13.22□□□□□ -0.29
CPSF7-201ENST00000340437 RNF113BQ8IZP6 322 aaKnown RBP13.22□□□□□ -0.29
CPSF7-201ENST00000340437 CAMKVQ8NCB2 501 aa13.22□□□□□ -0.29
CPSF7-201ENST00000340437 Q96M85 177 aa13.22□□□□□ -0.29
CPSF7-201ENST00000340437 GPR137Q96N19 417 aa13.22□□□□□ -0.29
CPSF7-201ENST00000340437 FXYD6Q9H0Q3 95 aa13.22□□□□□ -0.29
CPSF7-201ENST00000340437 LRIT1Q9P2V4 623 aa13.22□□□□□ -0.29
CPSF7-201ENST00000340437 PTPRZ1P23471 2315 aaPredicted RBP13.22□□□□□ -0.29
CPSF7-201ENST00000340437 C7orf66A4D0T2 115 aa13.22□□□□□ -0.29
CPSF7-201ENST00000340437 L7N2F9 121 aa13.22□□□□□ -0.29
CPSF7-201ENST00000340437 PEX14O75381 377 aa13.22□□□□□ -0.29
CPSF7-201ENST00000340437 GPR75O95800 540 aa13.22□□□□□ -0.29
CPSF7-201ENST00000340437 ARHGAP11AQ6P4F7 1023 aa13.22□□□□□ -0.29
CPSF7-201ENST00000340437 FGD2Q7Z6J4 655 aa13.22□□□□□ -0.29
CPSF7-201ENST00000340437 GALNT11Q8NCW6 608 aa13.22□□□□□ -0.29
CPSF7-201ENST00000340437 OR56B4Q8NH76 319 aa13.22□□□□□ -0.29
CPSF7-201ENST00000340437 FCAMRQ8WWV6 532 aa13.22□□□□□ -0.29
CPSF7-201ENST00000340437 SMIM19Q96E16 107 aa13.22□□□□□ -0.29
CPSF7-201ENST00000340437 ELF4Q99607 663 aaPredicted RBP13.22□□□□□ -0.29
CPSF7-201ENST00000340437 MKKSQ9NPJ1 570 aaPredicted RBP13.22□□□□□ -0.29
CPSF7-201ENST00000340437 CAMK2AQ9UQM7 478 aa13.22□□□□□ -0.29
CPSF7-201ENST00000340437 SLC17A4Q9Y2C5 497 aa13.22□□□□□ -0.29
CPSF7-201ENST00000340437 ARPC5O15511 151 aa13.21□□□□□ -0.29
CPSF7-201ENST00000340437 NDUFB2O95178 105 aa13.21□□□□□ -0.29
CPSF7-201ENST00000340437 POU3F2P20265 443 aaPredicted RBP13.21□□□□□ -0.29
CPSF7-201ENST00000340437 PSMB1P20618 241 aaKnown RBP13.21□□□□□ -0.29
CPSF7-201ENST00000340437 ZNF10P21506 573 aaPredicted RBP13.21□□□□□ -0.29
CPSF7-201ENST00000340437 MMP15P51511 669 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms