RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 HMGN1P05114 100 aa17.27■□□□□ 0.36
PSPC1-201ENST00000338910 TRHRP34981 398 aaPredicted RBP17.27■□□□□ 0.36
PSPC1-201ENST00000338910 TRAM1Q15629 374 aa17.27■□□□□ 0.36
PSPC1-201ENST00000338910 ZNF311Q5JNZ3 666 aa17.27■□□□□ 0.36
PSPC1-201ENST00000338910 ESPNLQ6ZVH7 1005 aa17.27■□□□□ 0.36
PSPC1-201ENST00000338910 Q7L0L9 218 aa17.27■□□□□ 0.36
PSPC1-201ENST00000338910 ABHD13Q7L211 337 aa17.27■□□□□ 0.36
PSPC1-201ENST00000338910 VRK2Q86Y07 508 aa17.27■□□□□ 0.36
PSPC1-201ENST00000338910 GID4Q8IVV7 300 aa17.27■□□□□ 0.36
PSPC1-201ENST00000338910 NKAIN4Q8IVV8 208 aa17.27■□□□□ 0.36
PSPC1-201ENST00000338910 FAM98AQ8NCA5 519 aaKnown RBP17.27■□□□□ 0.36
PSPC1-201ENST00000338910 OR5T3Q8NGG3 340 aa17.27■□□□□ 0.36
PSPC1-201ENST00000338910 MARC2Q969Z3 335 aa17.27■□□□□ 0.36
PSPC1-201ENST00000338910 SLC35A4Q96G79 324 aa17.27■□□□□ 0.36
PSPC1-201ENST00000338910 ACTRT3Q9BYD9 372 aa17.27■□□□□ 0.36
PSPC1-201ENST00000338910 SLC38A1Q9H2H9 487 aa17.27■□□□□ 0.36
PSPC1-201ENST00000338910 GPR27Q9NS67 375 aa17.27■□□□□ 0.36
PSPC1-201ENST00000338910 CAMK2AQ9UQM7 478 aa17.27■□□□□ 0.36
PSPC1-201ENST00000338910 ENTPD2Q9Y5L3 495 aa17.27■□□□□ 0.36
PSPC1-201ENST00000338910 A0A0B4J203 849 aa17.27■□□□□ 0.35
PSPC1-201ENST00000338910 KIR2DS5A0A0G2JLQ3 304 aa17.27■□□□□ 0.35
PSPC1-201ENST00000338910 A0A0G2JNG1 304 aa17.27■□□□□ 0.35
PSPC1-201ENST00000338910 ZC3H12DA2A288 527 aaKnown RBP17.27■□□□□ 0.35
PSPC1-201ENST00000338910 KIR2DS3K7RE56 304 aa17.27■□□□□ 0.35
PSPC1-201ENST00000338910 LDB3O75112 727 aa17.27■□□□□ 0.35
PSPC1-201ENST00000338910 ZNF217O75362 1048 aa17.27■□□□□ 0.35
PSPC1-201ENST00000338910 SNRPBP14678 240 aaKnown RBP17.27■□□□□ 0.35
PSPC1-201ENST00000338910 RAB3BP20337 219 aa17.27■□□□□ 0.35
PSPC1-201ENST00000338910 HHEXQ03014 270 aa17.27■□□□□ 0.35
PSPC1-201ENST00000338910 SLC3A1Q07837 685 aa17.27■□□□□ 0.35
PSPC1-201ENST00000338910 KIR2DS5Q14953 304 aa17.27■□□□□ 0.35
PSPC1-201ENST00000338910 MTFR2Q6P444 385 aa17.27■□□□□ 0.35
PSPC1-201ENST00000338910 NIPAL3Q6P499 406 aa17.27■□□□□ 0.35
PSPC1-201ENST00000338910 PLBD1Q6P4A8 553 aa17.27■□□□□ 0.35
PSPC1-201ENST00000338910 C17orf47Q8NEP4 570 aa17.27■□□□□ 0.35
PSPC1-201ENST00000338910 ADAMTS15Q8TE58 950 aa17.27■□□□□ 0.35
PSPC1-201ENST00000338910 SMIM4Q8WVI0 70 aa17.27■□□□□ 0.35
PSPC1-201ENST00000338910 ACOT11Q8WXI4 607 aaPredicted RBP17.27■□□□□ 0.35
PSPC1-201ENST00000338910 CHIAQ9BZP6 476 aa17.27■□□□□ 0.35
PSPC1-201ENST00000338910 OR6C65A6NJZ3 312 aa17.26■□□□□ 0.35
PSPC1-201ENST00000338910 HCRTR1O43613 425 aa17.26■□□□□ 0.35
PSPC1-201ENST00000338910 ATF1P18846 271 aa17.26■□□□□ 0.35
PSPC1-201ENST00000338910 GDNFP39905 211 aa17.26■□□□□ 0.35
PSPC1-201ENST00000338910 PRSS45Q7RTY3 260 aa17.26■□□□□ 0.35
PSPC1-201ENST00000338910 NRMQ8IXM6 262 aa17.26■□□□□ 0.35
PSPC1-201ENST00000338910 C7orf57Q8NEG2 295 aa17.26■□□□□ 0.35
PSPC1-201ENST00000338910 CDX2Q99626 313 aaPredicted RBP17.26■□□□□ 0.35
PSPC1-201ENST00000338910 AUNIPQ9H7T9 357 aa17.26■□□□□ 0.35
PSPC1-201ENST00000338910 NANSQ9NR45 359 aa17.26■□□□□ 0.35
PSPC1-201ENST00000338910 SLC22A7Q9Y694 548 aa17.26■□□□□ 0.35
PSPC1-201ENST00000338910 DAPL1A0PJW8 107 aa17.26■□□□□ 0.35
PSPC1-201ENST00000338910 B4DGG1 531 aa17.26■□□□□ 0.35
PSPC1-201ENST00000338910 CTDSPLO15194 276 aa17.26■□□□□ 0.35
PSPC1-201ENST00000338910 GMDSO60547 372 aa17.26■□□□□ 0.35
PSPC1-201ENST00000338910 SAGP10523 405 aaPredicted RBP17.26■□□□□ 0.35
PSPC1-201ENST00000338910 POU3F2P20265 443 aaPredicted RBP17.26■□□□□ 0.35
PSPC1-201ENST00000338910 MAOBP27338 520 aa17.26■□□□□ 0.35
PSPC1-201ENST00000338910 GCGRP47871 477 aa17.26■□□□□ 0.35
PSPC1-201ENST00000338910 DECR1Q16698 335 aa17.26■□□□□ 0.35
PSPC1-201ENST00000338910 TRMT12Q53H54 448 aaKnown RBP17.26■□□□□ 0.35
PSPC1-201ENST00000338910 FAM71CQ8NEG0 241 aa17.26■□□□□ 0.35
PSPC1-201ENST00000338910 RSC1A1Q92681 617 aa17.26■□□□□ 0.35
PSPC1-201ENST00000338910 SAMD8Q96LT4 415 aa17.26■□□□□ 0.35
PSPC1-201ENST00000338910 UBQLN3Q9H347 655 aa17.26■□□□□ 0.35
PSPC1-201ENST00000338910 FBXL21Q9UKT6 434 aa17.26■□□□□ 0.35
PSPC1-201ENST00000338910 ZMIZ1Q9ULJ6 1067 aa17.26■□□□□ 0.35
PSPC1-201ENST00000338910 SPEGQ15772 3267 aa17.26■□□□□ 0.35
PSPC1-201ENST00000338910 A0A0J9YY10 115 aa17.25■□□□□ 0.35
PSPC1-201ENST00000338910 OR5K4A6NMS3 321 aa17.25■□□□□ 0.35
PSPC1-201ENST00000338910 L7N2F9 121 aa17.25■□□□□ 0.35
PSPC1-201ENST00000338910 PIP5K1CO60331 668 aa17.25■□□□□ 0.35
PSPC1-201ENST00000338910 MT-ND5P03915 603 aa17.25■□□□□ 0.35
PSPC1-201ENST00000338910 ZNF10P21506 573 aaPredicted RBP17.25■□□□□ 0.35
PSPC1-201ENST00000338910 VEGFCP49767 419 aa17.25■□□□□ 0.35
PSPC1-201ENST00000338910 PDX1P52945 283 aa17.25■□□□□ 0.35
PSPC1-201ENST00000338910 METTL11BQ5VVY1 283 aa17.25■□□□□ 0.35
PSPC1-201ENST00000338910 MEPCEQ7L2J0 689 aaKnown RBP17.25■□□□□ 0.35
PSPC1-201ENST00000338910 PARGQ86W56 976 aa17.25■□□□□ 0.35
PSPC1-201ENST00000338910 TEX19Q8NA77 164 aa17.25■□□□□ 0.35
PSPC1-201ENST00000338910 CDS1Q92903 461 aa17.25■□□□□ 0.35
PSPC1-201ENST00000338910 PGLYRP3Q96LB9 341 aa17.25■□□□□ 0.35
PSPC1-201ENST00000338910 MED20Q9H944 212 aa17.25■□□□□ 0.35
PSPC1-201ENST00000338910 IFT46Q9NQC8 304 aa17.25■□□□□ 0.35
PSPC1-201ENST00000338910 ABRACLQ9P1F3 81 aa17.25■□□□□ 0.35
PSPC1-201ENST00000338910 MRPS17Q9Y2R5 130 aaKnown RBP17.25■□□□□ 0.35
PSPC1-201ENST00000338910 HRH3Q9Y5N1 445 aa17.25■□□□□ 0.35
PSPC1-201ENST00000338910 ABCA7Q8IZY2 2146 aa17.25■□□□□ 0.35
PSPC1-201ENST00000338910 A0A1B0GUH1 482 aa17.25■□□□□ 0.35
PSPC1-201ENST00000338910 CDC42EP2O14613 210 aa17.25■□□□□ 0.35
PSPC1-201ENST00000338910 ZIC2O95409 532 aaPredicted RBP17.25■□□□□ 0.35
PSPC1-201ENST00000338910 WDPCPO95876 746 aa17.25■□□□□ 0.35
PSPC1-201ENST00000338910 THY1P04216 161 aa17.25■□□□□ 0.35
PSPC1-201ENST00000338910 LPLP06858 475 aa17.25■□□□□ 0.35
PSPC1-201ENST00000338910 CPMP14384 443 aa17.25■□□□□ 0.35
PSPC1-201ENST00000338910 TMEM255AQ5JRV8 349 aa17.25■□□□□ 0.35
PSPC1-201ENST00000338910 SFRP4Q6FHJ7 346 aaPredicted RBP17.25■□□□□ 0.35
PSPC1-201ENST00000338910 MFSD12Q6NUT3 480 aa17.25■□□□□ 0.35
PSPC1-201ENST00000338910 BAIAP2L2Q6UXY1 529 aa17.25■□□□□ 0.35
PSPC1-201ENST00000338910 TMEM52Q8NDY8 209 aa17.25■□□□□ 0.35
PSPC1-201ENST00000338910 ZDHHC1Q8WTX9 485 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms